RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
SPIDR-203ENST00000517693 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
SPIDR-203ENST00000517693 PPLO60437 1756 aa16.32■□□□□ 0.2
SPIDR-203ENST00000517693 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
SPIDR-203ENST00000517693 ERVK-7P63135 1459 aa16.31■□□□□ 0.2
SPIDR-203ENST00000517693 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
SPIDR-203ENST00000517693 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
SPIDR-203ENST00000517693 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
SPIDR-203ENST00000517693 CFAP65Q6ZU64 1925 aaKnown RBP16.3■□□□□ 0.2
SPIDR-203ENST00000517693 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
SPIDR-203ENST00000517693 C11orf95C9JLR9 678 aaPredicted RBP16.29■□□□□ 0.2
SPIDR-203ENST00000517693 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
SPIDR-203ENST00000517693 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.2
SPIDR-203ENST00000517693 TMF1P82094 1093 aa16.27■□□□□ 0.2
SPIDR-203ENST00000517693 CDCA8Q53HL2 280 aa16.27■□□□□ 0.2
SPIDR-203ENST00000517693 PIK3C2GO75747 1445 aa16.26■□□□□ 0.19
SPIDR-203ENST00000517693 ZFYVE9O95405 1425 aa16.26■□□□□ 0.19
SPIDR-203ENST00000517693 YTHDC1Q96MU7 727 aaKnown RBP16.26■□□□□ 0.19
SPIDR-203ENST00000517693 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
SPIDR-203ENST00000517693 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
SPIDR-203ENST00000517693 ADGRF5Q8IZF2 1346 aa16.24■□□□□ 0.19
SPIDR-203ENST00000517693 IDI1Q13907 227 aa16.23■□□□□ 0.19
SPIDR-203ENST00000517693 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
SPIDR-203ENST00000517693 KTN1Q86UP2 1357 aaKnown RBP16.22■□□□□ 0.19
SPIDR-203ENST00000517693 TESK2Q96S53 571 aa16.22■□□□□ 0.19
SPIDR-203ENST00000517693 MYO3AQ8NEV4 1616 aa16.21■□□□□ 0.19
SPIDR-203ENST00000517693 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
SPIDR-203ENST00000517693 MLECQ14165 292 aa16.19■□□□□ 0.18
SPIDR-203ENST00000517693 PRKRIP1Q9H875 184 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-203ENST00000517693 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
SPIDR-203ENST00000517693 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
SPIDR-203ENST00000517693 CFAP70Q5T0N1 1121 aa16.19■□□□□ 0.18
SPIDR-203ENST00000517693 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
SPIDR-203ENST00000517693 KDM5AP29375 1690 aaKnown RBP16.17■□□□□ 0.18
SPIDR-203ENST00000517693 DISP3Q9P2K9 1392 aa16.16■□□□□ 0.18
SPIDR-203ENST00000517693 ADGRB1O14514 1584 aa16.16■□□□□ 0.18
SPIDR-203ENST00000517693 FBXO31Q5XUX0 539 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-203ENST00000517693 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
SPIDR-203ENST00000517693 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
SPIDR-203ENST00000517693 TNRQ92752 1358 aa16.13■□□□□ 0.17
SPIDR-203ENST00000517693 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
SPIDR-203ENST00000517693 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
SPIDR-203ENST00000517693 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPIDR-203ENST00000517693 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
SPIDR-203ENST00000517693 RALBP1Q15311 655 aa16.12■□□□□ 0.17
SPIDR-203ENST00000517693 NLRP1Q9C000 1473 aa16.11■□□□□ 0.17
SPIDR-203ENST00000517693 FER1L4A9Z1Z3 1794 aa16.09■□□□□ 0.17
SPIDR-203ENST00000517693 RIMS2Q9UQ26 1411 aa16.09■□□□□ 0.17
SPIDR-203ENST00000517693 QRICH2Q9H0J4 1663 aa16.09■□□□□ 0.17
SPIDR-203ENST00000517693 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
SPIDR-203ENST00000517693 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
SPIDR-203ENST00000517693 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
SPIDR-203ENST00000517693 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
SPIDR-203ENST00000517693 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
SPIDR-203ENST00000517693 TRAK1Q9UPV9 953 aa16.05■□□□□ 0.16
SPIDR-203ENST00000517693 MYOM1P52179 1685 aa16.04■□□□□ 0.16
SPIDR-203ENST00000517693 BRD4O60885 1362 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-203ENST00000517693 C3P01024 1663 aa16.03■□□□□ 0.16
SPIDR-203ENST00000517693 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-203ENST00000517693 UBR1Q8IWV7 1749 aa16.03■□□□□ 0.16
SPIDR-203ENST00000517693 PANK3Q9H999 370 aa16.03■□□□□ 0.16
SPIDR-203ENST00000517693 PARD3Q8TEW0 1356 aa16.03■□□□□ 0.16
SPIDR-203ENST00000517693 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-203ENST00000517693 KNSTRNQ9Y448 316 aa16.03■□□□□ 0.16
SPIDR-203ENST00000517693 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.16
SPIDR-203ENST00000517693 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
SPIDR-203ENST00000517693 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.16
SPIDR-203ENST00000517693 EVC2Q86UK5 1308 aa16.02■□□□□ 0.16
SPIDR-203ENST00000517693 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-203ENST00000517693 TMEM132EQ6IEE7 984 aa16.02■□□□□ 0.16
SPIDR-203ENST00000517693 DLC1Q96QB1 1528 aa16.02■□□□□ 0.15
SPIDR-203ENST00000517693 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
SPIDR-203ENST00000517693 NINLQ9Y2I6 1382 aa16■□□□□ 0.15
SPIDR-203ENST00000517693 NLRP13Q86W25 1043 aa16■□□□□ 0.15
SPIDR-203ENST00000517693 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
SPIDR-203ENST00000517693 SETD1AO15047 1707 aaKnown RBP15.98■□□□□ 0.15
SPIDR-203ENST00000517693 LRPPRCP42704 1394 aaKnown RBP15.98■□□□□ 0.15
SPIDR-203ENST00000517693 PTPRMP28827 1452 aa15.97■□□□□ 0.15
SPIDR-203ENST00000517693 POGKQ9P215 609 aa15.96■□□□□ 0.14
SPIDR-203ENST00000517693 SLIT1O75093 1534 aa15.95■□□□□ 0.14
SPIDR-203ENST00000517693 KNDC1Q76NI1 1749 aa15.95■□□□□ 0.14
SPIDR-203ENST00000517693 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
SPIDR-203ENST00000517693 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
SPIDR-203ENST00000517693 ATAD2Q6PL18 1390 aa15.95■□□□□ 0.14
SPIDR-203ENST00000517693 ABCC11Q96J66 1382 aa15.95■□□□□ 0.14
SPIDR-203ENST00000517693 NRXN3Q9Y4C0 1643 aa15.95■□□□□ 0.14
SPIDR-203ENST00000517693 PLEKHG1Q9ULL1 1385 aa15.94■□□□□ 0.14
SPIDR-203ENST00000517693 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
SPIDR-203ENST00000517693 FAM9BQ8IZU0 186 aa15.94■□□□□ 0.14
SPIDR-203ENST00000517693 STK26Q9P289 416 aa15.93■□□□□ 0.14
SPIDR-203ENST00000517693 ARHGAP23Q9P227 1491 aa15.92■□□□□ 0.14
SPIDR-203ENST00000517693 THEMISQ8N1K5 641 aaPredicted RBP15.92■□□□□ 0.14
SPIDR-203ENST00000517693 USP32Q8NFA0 1604 aa15.92■□□□□ 0.14
SPIDR-203ENST00000517693 INSRP06213 1382 aa15.92■□□□□ 0.14
SPIDR-203ENST00000517693 TECPR2O15040 1411 aa15.91■□□□□ 0.14
SPIDR-203ENST00000517693 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
SPIDR-203ENST00000517693 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
SPIDR-203ENST00000517693 FAM135BQ49AJ0 1406 aa15.91■□□□□ 0.14
SPIDR-203ENST00000517693 CCDC184Q52MB2 194 aa15.91■□□□□ 0.14
SPIDR-203ENST00000517693 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms