RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 MSH6P52701 1360 aa16.3■□□□□ 0.2
PDGFRB-203ENST00000517660 MEX3CQ5U5Q3 659 aaKnown RBP16.3■□□□□ 0.2
PDGFRB-203ENST00000517660 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
PDGFRB-203ENST00000517660 AHDC1Q5TGY3 1603 aaPredicted RBP16.29■□□□□ 0.2
PDGFRB-203ENST00000517660 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
PDGFRB-203ENST00000517660 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
PDGFRB-203ENST00000517660 ARHGAP31Q2M1Z3 1444 aa16.28■□□□□ 0.2
PDGFRB-203ENST00000517660 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
PDGFRB-203ENST00000517660 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
PDGFRB-203ENST00000517660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDGFRB-203ENST00000517660 KDM5AP29375 1690 aaKnown RBP16.27■□□□□ 0.2
PDGFRB-203ENST00000517660 CFAP65Q6ZU64 1925 aaKnown RBP16.26■□□□□ 0.19
PDGFRB-203ENST00000517660 KANK1Q14678 1352 aa16.25■□□□□ 0.19
PDGFRB-203ENST00000517660 EFCAB6Q5THR3 1501 aa16.24■□□□□ 0.19
PDGFRB-203ENST00000517660 AFF2P51816 1311 aa16.24■□□□□ 0.19
PDGFRB-203ENST00000517660 IDI1Q13907 227 aa16.21■□□□□ 0.19
PDGFRB-203ENST00000517660 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
PDGFRB-203ENST00000517660 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
PDGFRB-203ENST00000517660 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.18
PDGFRB-203ENST00000517660 NUTM2BA6NNL0 878 aaPredicted RBP16.2■□□□□ 0.18
PDGFRB-203ENST00000517660 NUTM2EB1AL46 878 aaPredicted RBP16.2■□□□□ 0.18
PDGFRB-203ENST00000517660 NUTM2AQ8IVF1 878 aaPredicted RBP16.2■□□□□ 0.18
PDGFRB-203ENST00000517660 EP400Q96L91 3159 aa16.2■□□□□ 0.18
PDGFRB-203ENST00000517660 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
PDGFRB-203ENST00000517660 CHD2O14647 1828 aaKnown RBP16.17■□□□□ 0.18
PDGFRB-203ENST00000517660 RBM6P78332 1123 aaKnown RBP16.17■□□□□ 0.18
PDGFRB-203ENST00000517660 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
PDGFRB-203ENST00000517660 QTRT2Q9H974 415 aaKnown RBP16.16■□□□□ 0.18
PDGFRB-203ENST00000517660 NCOA3Q9Y6Q9 1424 aa16.16■□□□□ 0.18
PDGFRB-203ENST00000517660 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
PDGFRB-203ENST00000517660 ADGRB3O60242 1522 aa16.15■□□□□ 0.18
PDGFRB-203ENST00000517660 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
PDGFRB-203ENST00000517660 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
PDGFRB-203ENST00000517660 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.18
PDGFRB-203ENST00000517660 ROCK1Q13464 1354 aa16.14■□□□□ 0.17
PDGFRB-203ENST00000517660 ZFYVE9O95405 1425 aa16.14■□□□□ 0.17
PDGFRB-203ENST00000517660 SETD5Q9C0A6 1442 aa16.14■□□□□ 0.17
PDGFRB-203ENST00000517660 ITGAEP38570 1179 aa16.14■□□□□ 0.17
PDGFRB-203ENST00000517660 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
PDGFRB-203ENST00000517660 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
PDGFRB-203ENST00000517660 NOS1P29475 1434 aa16.12■□□□□ 0.17
PDGFRB-203ENST00000517660 PLEKHG1Q9ULL1 1385 aa16.12■□□□□ 0.17
PDGFRB-203ENST00000517660 C8orf37Q96NL8 207 aa16.11■□□□□ 0.17
PDGFRB-203ENST00000517660 ASXL1Q8IXJ9 1541 aa16.1■□□□□ 0.17
PDGFRB-203ENST00000517660 CADPS2Q86UW7 1296 aa16.1■□□□□ 0.17
PDGFRB-203ENST00000517660 SLC52A1Q9NWF4 448 aa16.1■□□□□ 0.17
PDGFRB-203ENST00000517660 C19orf44Q9H6X5 657 aa16.09■□□□□ 0.17
PDGFRB-203ENST00000517660 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.17
PDGFRB-203ENST00000517660 PNPLA6Q8IY17 1366 aa16.08■□□□□ 0.16
PDGFRB-203ENST00000517660 ADAMTS13Q76LX8 1427 aa16.08■□□□□ 0.16
PDGFRB-203ENST00000517660 BCANQ96GW7 911 aa16.06■□□□□ 0.16
PDGFRB-203ENST00000517660 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
PDGFRB-203ENST00000517660 ATF3P18847 181 aa16.05■□□□□ 0.16
PDGFRB-203ENST00000517660 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
PDGFRB-203ENST00000517660 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
PDGFRB-203ENST00000517660 RPRD2Q5VT52 1461 aaKnown RBP16.04■□□□□ 0.16
PDGFRB-203ENST00000517660 MST1RQ04912 1400 aa16.04■□□□□ 0.16
PDGFRB-203ENST00000517660 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
PDGFRB-203ENST00000517660 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
PDGFRB-203ENST00000517660 NUP155O75694 1391 aa16.03■□□□□ 0.16
PDGFRB-203ENST00000517660 RRBP1Q9P2E9 1410 aaKnown RBP16.02■□□□□ 0.16
PDGFRB-203ENST00000517660 LRP5O75197 1615 aa16.02■□□□□ 0.16
PDGFRB-203ENST00000517660 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
PDGFRB-203ENST00000517660 MYO5BQ9ULV0 1848 aa16.01■□□□□ 0.15
PDGFRB-203ENST00000517660 ATRNO75882 1429 aa16.01■□□□□ 0.15
PDGFRB-203ENST00000517660 DCCP43146 1447 aa16.01■□□□□ 0.15
PDGFRB-203ENST00000517660 HDGFP51858 240 aaKnown RBP16■□□□□ 0.15
PDGFRB-203ENST00000517660 LRRC59Q96AG4 307 aaKnown RBP16■□□□□ 0.15
PDGFRB-203ENST00000517660 TMEM131LA2VDJ0 1609 aa16■□□□□ 0.15
PDGFRB-203ENST00000517660 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
PDGFRB-203ENST00000517660 FOXD1Q16676 465 aa15.98■□□□□ 0.15
PDGFRB-203ENST00000517660 GCC2Q8IWJ2 1684 aa15.98■□□□□ 0.15
PDGFRB-203ENST00000517660 PIK3R4Q99570 1358 aa15.98■□□□□ 0.15
PDGFRB-203ENST00000517660 UNC13BO14795 1591 aa15.97■□□□□ 0.15
PDGFRB-203ENST00000517660 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
PDGFRB-203ENST00000517660 FNBP4Q8N3X1 1017 aaPredicted RBP15.97■□□□□ 0.15
PDGFRB-203ENST00000517660 USP21Q9UK80 565 aa15.97■□□□□ 0.15
PDGFRB-203ENST00000517660 TRPM2O94759 1503 aa15.96■□□□□ 0.15
PDGFRB-203ENST00000517660 CCDC125Q86Z20 511 aa15.96■□□□□ 0.15
PDGFRB-203ENST00000517660 PPP1R15AO75807 674 aaPredicted RBP15.95■□□□□ 0.14
PDGFRB-203ENST00000517660 TRPC5Q9UL62 973 aaPredicted RBP15.95■□□□□ 0.14
PDGFRB-203ENST00000517660 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
PDGFRB-203ENST00000517660 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.94■□□□□ 0.14
PDGFRB-203ENST00000517660 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
PDGFRB-203ENST00000517660 DEFB132Q7Z7B7 95 aa15.93■□□□□ 0.14
PDGFRB-203ENST00000517660 NAIPQ13075 1403 aa15.93■□□□□ 0.14
PDGFRB-203ENST00000517660 BCL9LQ86UU0 1499 aa15.92■□□□□ 0.14
PDGFRB-203ENST00000517660 LAMC1P11047 1609 aa15.92■□□□□ 0.14
PDGFRB-203ENST00000517660 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
PDGFRB-203ENST00000517660 BLMP54132 1417 aaPredicted RBP15.91■□□□□ 0.14
PDGFRB-203ENST00000517660 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
PDGFRB-203ENST00000517660 NRXN3Q9Y4C0 1643 aa15.89■□□□□ 0.13
PDGFRB-203ENST00000517660 HFM1A2PYH4 1435 aa15.88■□□□□ 0.13
PDGFRB-203ENST00000517660 SOS2Q07890 1332 aaPredicted RBP15.88■□□□□ 0.13
PDGFRB-203ENST00000517660 E9PCH4 1651 aa15.87■□□□□ 0.13
PDGFRB-203ENST00000517660 COL22A1Q8NFW1 1626 aaPredicted RBP15.86■□□□□ 0.13
PDGFRB-203ENST00000517660 ADGRL3Q9HAR2 1447 aa15.86■□□□□ 0.13
PDGFRB-203ENST00000517660 MYOM2P54296 1465 aa15.86■□□□□ 0.13
PDGFRB-203ENST00000517660 C1orf167Q5SNV9 1468 aa15.86■□□□□ 0.13
PDGFRB-203ENST00000517660 NALCNQ8IZF0 1738 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms