RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ADGRD1Q6QNK2 874 aa6.45□□□□□ -1.38
SKP1-203ENST00000517625 POTEBQ6S5H4 581 aa6.45□□□□□ -1.38
SKP1-203ENST00000517625 ERICH6Q7L0X2 663 aa6.45□□□□□ -1.38
SKP1-203ENST00000517625 FAM117AQ9C073 453 aa6.45□□□□□ -1.38
SKP1-203ENST00000517625 PLEKHG3A1L390 1219 aa6.44□□□□□ -1.38
SKP1-203ENST00000517625 C3orf80F5H4A9 247 aa6.43□□□□□ -1.38
SKP1-203ENST00000517625 CD46P15529 392 aa6.43□□□□□ -1.38
SKP1-203ENST00000517625 SH3D19Q5HYK7 790 aa6.43□□□□□ -1.38
SKP1-203ENST00000517625 SLF2Q8IX21 1173 aa6.43□□□□□ -1.38
SKP1-203ENST00000517625 MRPL50Q8N5N7 158 aaKnown RBP6.43□□□□□ -1.38
SKP1-203ENST00000517625 IL27Q8NEV9 243 aa6.43□□□□□ -1.38
SKP1-203ENST00000517625 BEGAINQ9BUH8 593 aa6.42□□□□□ -1.38
SKP1-203ENST00000517625 SMAPO00193 183 aa6.41□□□□□ -1.38
SKP1-203ENST00000517625 HRO43593 1189 aa6.41□□□□□ -1.38
SKP1-203ENST00000517625 NLRP7Q8WX94 980 aa6.41□□□□□ -1.38
SKP1-203ENST00000517625 SEPT9Q9UHD8 586 aaPredicted RBP6.41□□□□□ -1.38
SKP1-203ENST00000517625 GJA5P36382 358 aa6.4□□□□□ -1.38
SKP1-203ENST00000517625 USP46P62068 366 aa6.4□□□□□ -1.38
SKP1-203ENST00000517625 STAC3Q96MF2 364 aa6.4□□□□□ -1.38
SKP1-203ENST00000517625 GTF3C3Q9Y5Q9 886 aa6.4□□□□□ -1.38
SKP1-203ENST00000517625 DDX11L8A8MPP1 907 aa6.39□□□□□ -1.39
SKP1-203ENST00000517625 SKIV2LQ15477 1246 aaKnown RBP6.39□□□□□ -1.39
SKP1-203ENST00000517625 TUSC1Q2TAM9 212 aa6.39□□□□□ -1.39
SKP1-203ENST00000517625 SWT1Q5T5J6 900 aaKnown RBP6.39□□□□□ -1.39
SKP1-203ENST00000517625 ZFRQ96KR1 1074 aaKnown RBP6.39□□□□□ -1.39
SKP1-203ENST00000517625 PCMTD1Q96MG8 357 aaPredicted RBP6.39□□□□□ -1.39
SKP1-203ENST00000517625 PRR14Q9BWN1 585 aa6.39□□□□□ -1.39
SKP1-203ENST00000517625 RDH13Q8NBN7 331 aa6.38□□□□□ -1.39
SKP1-203ENST00000517625 ANKK1Q8NFD2 765 aa6.38□□□□□ -1.39
SKP1-203ENST00000517625 LRCH3Q96II8 777 aa6.38□□□□□ -1.39
SKP1-203ENST00000517625 GOLGA8CPA6NN73 597 aa6.37□□□□□ -1.39
SKP1-203ENST00000517625 ANKRD13DQ6ZTN6 518 aa6.37□□□□□ -1.39
SKP1-203ENST00000517625 SAMD7Q7Z3H4 446 aa6.37□□□□□ -1.39
SKP1-203ENST00000517625 NUTM1Q86Y26 1132 aa6.37□□□□□ -1.39
SKP1-203ENST00000517625 GCGRP47871 477 aa6.36□□□□□ -1.39
SKP1-203ENST00000517625 MYSM1Q5VVJ2 828 aa6.36□□□□□ -1.39
SKP1-203ENST00000517625 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
SKP1-203ENST00000517625 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
SKP1-203ENST00000517625 TBC1D2Q9BYX2 928 aa6.36□□□□□ -1.39
SKP1-203ENST00000517625 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.36□□□□□ -1.39
SKP1-203ENST00000517625 KDM4AO75164 1064 aa6.35□□□□□ -1.39
SKP1-203ENST00000517625 CLK2P49760 499 aaKnown RBP6.35□□□□□ -1.39
SKP1-203ENST00000517625 KMT5BQ4FZB7 885 aa6.35□□□□□ -1.39
SKP1-203ENST00000517625 GRIPAP1Q4V328 841 aa6.35□□□□□ -1.39
SKP1-203ENST00000517625 POTEGQ6S5H5 508 aa6.35□□□□□ -1.39
SKP1-203ENST00000517625 SPIRE2Q8WWL2 714 aa6.35□□□□□ -1.39
SKP1-203ENST00000517625 SOWAHBA6NEL2 793 aa6.34□□□□□ -1.39
SKP1-203ENST00000517625 POTEMA6NI47 508 aa6.34□□□□□ -1.39
SKP1-203ENST00000517625 SPTLC1O15269 473 aa6.34□□□□□ -1.39
SKP1-203ENST00000517625 SLC10A3P09131 477 aa6.34□□□□□ -1.39
SKP1-203ENST00000517625 PCDH10Q9P2E7 1040 aa6.34□□□□□ -1.39
SKP1-203ENST00000517625 CFHP08603 1231 aa6.33□□□□□ -1.4
SKP1-203ENST00000517625 NYAP1Q6ZVC0 841 aa6.33□□□□□ -1.4
SKP1-203ENST00000517625 WNT2BQ93097 391 aa6.33□□□□□ -1.4
SKP1-203ENST00000517625 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.33□□□□□ -1.4
SKP1-203ENST00000517625 HOXA2O43364 376 aa6.32□□□□□ -1.4
SKP1-203ENST00000517625 PRPF38BQ5VTL8 546 aaKnown RBP6.32□□□□□ -1.4
SKP1-203ENST00000517625 RSBN1LQ6PCB5 846 aaPredicted RBP6.32□□□□□ -1.4
SKP1-203ENST00000517625 RIC3Q7Z5B4 369 aa6.32□□□□□ -1.4
SKP1-203ENST00000517625 CDAN1Q8IWY9 1227 aa6.32□□□□□ -1.4
SKP1-203ENST00000517625 TSR3Q9UJK0 312 aaKnown RBP6.32□□□□□ -1.4
SKP1-203ENST00000517625 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
SKP1-203ENST00000517625 RNF40O75150 1001 aa6.31□□□□□ -1.4
SKP1-203ENST00000517625 ATP6V1AP38606 617 aa6.3□□□□□ -1.4
SKP1-203ENST00000517625 PPP4CP60510 307 aa6.3□□□□□ -1.4
SKP1-203ENST00000517625 FLIIQ13045 1269 aa6.3□□□□□ -1.4
SKP1-203ENST00000517625 PPP2R2DQ66LE6 453 aa6.3□□□□□ -1.4
SKP1-203ENST00000517625 MOXD2PA6NHM9 499 aa6.29□□□□□ -1.4
SKP1-203ENST00000517625 SPDYE5A6NIY4 337 aa6.29□□□□□ -1.4
SKP1-203ENST00000517625 POLR3EQ9NVU0 708 aa6.29□□□□□ -1.4
SKP1-203ENST00000517625 HPS5Q9UPZ3 1129 aa6.29□□□□□ -1.4
SKP1-203ENST00000517625 SOCS7O14512 581 aa6.28□□□□□ -1.4
SKP1-203ENST00000517625 FDX1P10109 184 aa6.28□□□□□ -1.4
SKP1-203ENST00000517625 Q3C1V9 767 aa6.28□□□□□ -1.4
SKP1-203ENST00000517625 THSD4Q6ZMP0 1018 aa6.28□□□□□ -1.4
SKP1-203ENST00000517625 ZBTB3Q9H5J0 574 aa6.28□□□□□ -1.4
SKP1-203ENST00000517625 LIMD1Q9UGP4 676 aa6.28□□□□□ -1.4
SKP1-203ENST00000517625 BCAMP50895 628 aa6.27□□□□□ -1.41
SKP1-203ENST00000517625 FUT2Q10981 343 aa6.27□□□□□ -1.41
SKP1-203ENST00000517625 TMEM259Q4ZIN3 620 aa6.27□□□□□ -1.41
SKP1-203ENST00000517625 BANK1Q8NDB2 785 aa6.27□□□□□ -1.41
SKP1-203ENST00000517625 LILRB3O75022 631 aa6.26□□□□□ -1.41
SKP1-203ENST00000517625 MORN1Q5T089 497 aa6.26□□□□□ -1.41
SKP1-203ENST00000517625 PROCA1Q8NCQ7 364 aaPredicted RBP6.26□□□□□ -1.41
SKP1-203ENST00000517625 ATP1B4Q9UN42 357 aaPredicted RBP6.26□□□□□ -1.41
SKP1-203ENST00000517625 SALL2Q9Y467 1007 aaPredicted RBP6.26□□□□□ -1.41
SKP1-203ENST00000517625 APBB1O00213 710 aa6.25□□□□□ -1.41
SKP1-203ENST00000517625 NR1I2O75469 434 aa6.25□□□□□ -1.41
SKP1-203ENST00000517625 NDUFV2P19404 249 aa6.25□□□□□ -1.41
SKP1-203ENST00000517625 RFC5P40937 340 aa6.25□□□□□ -1.41
SKP1-203ENST00000517625 MTMR2Q13614 643 aa6.25□□□□□ -1.41
SKP1-203ENST00000517625 APLP1P51693 650 aa6.24□□□□□ -1.41
SKP1-203ENST00000517625 C14orf37Q86TY3 774 aa6.24□□□□□ -1.41
SKP1-203ENST00000517625 KCTD12Q96CX2 325 aaKnown RBP6.24□□□□□ -1.41
SKP1-203ENST00000517625 MYT1LQ9UL68 1186 aa6.24□□□□□ -1.41
SKP1-203ENST00000517625 PCDHB3Q9Y5E6 796 aa6.24□□□□□ -1.41
SKP1-203ENST00000517625 HRCP23327 699 aa6.23□□□□□ -1.41
SKP1-203ENST00000517625 WBP1LQ9NX94 342 aa6.23□□□□□ -1.41
SKP1-203ENST00000517625 PCDHGC3Q9UN70 934 aa6.23□□□□□ -1.41
SKP1-203ENST00000517625 NUTM2BA6NNL0 878 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms