RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 SNPHO15079 494 aa10.3□□□□□ -0.76
CTNNA1-202ENST00000517533 MOXD2PA6NHM9 499 aa10.29□□□□□ -0.76
CTNNA1-202ENST00000517533 RFC5P40937 340 aa10.29□□□□□ -0.76
CTNNA1-202ENST00000517533 RIC3Q7Z5B4 369 aa10.29□□□□□ -0.76
CTNNA1-202ENST00000517533 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
CTNNA1-202ENST00000517533 SNRKQ9NRH2 765 aa10.29□□□□□ -0.76
CTNNA1-202ENST00000517533 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
CTNNA1-202ENST00000517533 A6NJR5 290 aa10.28□□□□□ -0.76
CTNNA1-202ENST00000517533 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-202ENST00000517533 NDUFV2P19404 249 aa10.28□□□□□ -0.76
CTNNA1-202ENST00000517533 RANGAP1P46060 587 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-202ENST00000517533 SPTLC1O15269 473 aa10.27□□□□□ -0.77
CTNNA1-202ENST00000517533 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
CTNNA1-202ENST00000517533 RSBN1LQ6PCB5 846 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-202ENST00000517533 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-202ENST00000517533 PCDHB15Q9Y5E8 787 aa10.27□□□□□ -0.77
CTNNA1-202ENST00000517533 QPCTQ16769 361 aa10.26□□□□□ -0.77
CTNNA1-202ENST00000517533 PPP2R2DQ66LE6 453 aa10.26□□□□□ -0.77
CTNNA1-202ENST00000517533 AXIN2Q9Y2T1 843 aa10.26□□□□□ -0.77
CTNNA1-202ENST00000517533 APBB1O00213 710 aa10.25□□□□□ -0.77
CTNNA1-202ENST00000517533 TRAK2O60296 914 aa10.25□□□□□ -0.77
CTNNA1-202ENST00000517533 SLC10A3P09131 477 aa10.25□□□□□ -0.77
CTNNA1-202ENST00000517533 CSPP1Q1MSJ5 1256 aa10.24□□□□□ -0.77
CTNNA1-202ENST00000517533 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-202ENST00000517533 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
CTNNA1-202ENST00000517533 FNBP4Q8N3X1 1017 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-202ENST00000517533 ARID3AQ99856 593 aa10.24□□□□□ -0.77
CTNNA1-202ENST00000517533 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-202ENST00000517533 HLA-CQ95604 372 aa10.23□□□□□ -0.77
CTNNA1-202ENST00000517533 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
CTNNA1-202ENST00000517533 TUSC1Q2TAM9 212 aa10.22□□□□□ -0.77
CTNNA1-202ENST00000517533 RTL5Q5HYW3 569 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-202ENST00000517533 SWT1Q5T5J6 900 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-202ENST00000517533 LILRB3O75022 631 aa10.21□□□□□ -0.77
CTNNA1-202ENST00000517533 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
CTNNA1-202ENST00000517533 RDH13Q8NBN7 331 aa10.21□□□□□ -0.77
CTNNA1-202ENST00000517533 COG6Q9Y2V7 657 aa10.21□□□□□ -0.77
CTNNA1-202ENST00000517533 SPDYE5A6NIY4 337 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 ARHGAP33O14559 1287 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 ST18O60284 1047 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 GCGRP47871 477 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 PCDHGC3Q9UN70 934 aa10.2□□□□□ -0.78
CTNNA1-202ENST00000517533 ERBB3P21860 1342 aa10.19□□□□□ -0.78
CTNNA1-202ENST00000517533 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
CTNNA1-202ENST00000517533 POTEBQ6S5H4 581 aa10.19□□□□□ -0.78
CTNNA1-202ENST00000517533 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
CTNNA1-202ENST00000517533 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
CTNNA1-202ENST00000517533 RABGEF1Q9UJ41 708 aa10.19□□□□□ -0.78
CTNNA1-202ENST00000517533 KDM4AO75164 1064 aa10.18□□□□□ -0.78
CTNNA1-202ENST00000517533 PROSER2Q86WR7 435 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-202ENST00000517533 SLC4A5Q9BY07 1137 aa10.18□□□□□ -0.78
CTNNA1-202ENST00000517533 HOXA2O43364 376 aa10.17□□□□□ -0.78
CTNNA1-202ENST00000517533 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
CTNNA1-202ENST00000517533 GJA5P36382 358 aa10.16□□□□□ -0.78
CTNNA1-202ENST00000517533 LHX8Q68G74 356 aa10.16□□□□□ -0.78
CTNNA1-202ENST00000517533 ZNF777Q9ULD5 760 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-202ENST00000517533 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-202ENST00000517533 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
CTNNA1-202ENST00000517533 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
CTNNA1-202ENST00000517533 HRCP23327 699 aa10.14□□□□□ -0.79
CTNNA1-202ENST00000517533 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
CTNNA1-202ENST00000517533 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 AP1G2O75843 785 aa10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 FDX1P10109 184 aa10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 EMP3P54852 163 aa10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
CTNNA1-202ENST00000517533 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
CTNNA1-202ENST00000517533 USP17L8P0C7I0 530 aa10.1□□□□□ -0.79
CTNNA1-202ENST00000517533 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-202ENST00000517533 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-202ENST00000517533 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 PBX2P40425 430 aa10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 USP46P62068 366 aa10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 FUT2Q10981 343 aa10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 NUTM2DQ5VT03 806 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 HMX1Q9NP08 348 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 TBC1D2BQ9UPU7 963 aa10.09□□□□□ -0.79
CTNNA1-202ENST00000517533 RAD21O60216 631 aa10.08□□□□□ -0.8
CTNNA1-202ENST00000517533 GPR37L1O60883 481 aa10.08□□□□□ -0.8
CTNNA1-202ENST00000517533 CFHP08603 1231 aa10.07□□□□□ -0.8
CTNNA1-202ENST00000517533 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
CTNNA1-202ENST00000517533 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-202ENST00000517533 HS3ST6Q96QI5 342 aa10.07□□□□□ -0.8
CTNNA1-202ENST00000517533 ZBTB3Q9H5J0 574 aa10.07□□□□□ -0.8
CTNNA1-202ENST00000517533 CFAP99D6REC4 459 aa10.06□□□□□ -0.8
CTNNA1-202ENST00000517533 POM121CA8CG34 1229 aa10.05□□□□□ -0.8
CTNNA1-202ENST00000517533 ZFRQ96KR1 1074 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-202ENST00000517533 TRIM34Q9BYJ4 488 aa10.05□□□□□ -0.8
CTNNA1-202ENST00000517533 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
CTNNA1-202ENST00000517533 SOCS7O14512 581 aa10.04□□□□□ -0.8
CTNNA1-202ENST00000517533 NPM2Q86SE8 214 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms