RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 SPTLC1O15269 473 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 GPR37L1O60883 481 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 CD44P16070 742 aaKnown RBP4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 NDUFV2P19404 249 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 RSBN1LQ6PCB5 846 aaPredicted RBP4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 CABLES1Q8TDN4 633 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 MRRFQ96E11 262 aaKnown RBP4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 UCN2Q96RP3 112 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PRM3Q9NNZ6 103 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 BMP2KQ9NSY1 1161 aaPredicted RBP4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 TFIP11Q9UBB9 837 aaKnown RBP4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 TRIM35Q9UPQ4 493 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PCDHB15Q9Y5E8 787 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 ADGRG1Q9Y653 693 aa4.18□□□□□ -1.74
SCARNA11.3-201ENST00000517276 RBM47A0AV96 593 aaKnown RBP4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 EIF5BO60841 1220 aaKnown RBP4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 OATP04181 439 aa4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 FXR2P51116 673 aaKnown RBP eCLIP4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 TMEM121BQ9BXQ6 578 aaPredicted RBP4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 CHMP4AQ9BY43 222 aa4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 HMX1Q9NP08 348 aaPredicted RBP4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 BOLA1Q9Y3E2 137 aa4.17□□□□□ -1.74
SCARNA11.3-201ENST00000517276 LILRB3O75022 631 aa4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PHF14O94880 888 aa4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 TIE1P35590 1138 aa4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 DIXDC1Q155Q3 683 aa4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 NOM1Q5C9Z4 860 aaKnown RBP4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 TXNDC2Q86VQ3 553 aa4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 PCDHGA10Q9Y5H3 936 aa4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 NDUFB9Q9Y6M9 179 aa4.16□□□□□ -1.74
SCARNA11.3-201ENST00000517276 NUTM2BA6NNL0 878 aaPredicted RBP4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 NUTM2EB1AL46 878 aaPredicted RBP4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SOCS7O14512 581 aa4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ATG7O95352 703 aa4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 WASHC4Q2M389 1173 aa4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TUSC1Q2TAM9 212 aa4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 NUTM2DQ5VT03 806 aaPredicted RBP4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 NUTM2AQ8IVF1 878 aaPredicted RBP4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 EPAS1Q99814 870 aa4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TRIM34Q9BYJ4 488 aa4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ALG2Q9H553 416 aa4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 GNEQ9Y223 722 aaKnown RBP4.15□□□□□ -1.75
SCARNA11.3-201ENST00000517276 CD46P15529 392 aa4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 DNAJC14Q6Y2X3 702 aaPredicted RBP4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TBC1D9Q6ZT07 1266 aa4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 NUTM1Q86Y26 1132 aa4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SLAIN1Q8ND83 568 aa4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 PRR7Q8TB68 274 aa4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ANO8Q9HCE9 1232 aaPredicted RBP4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 MAFBQ9Y5Q3 323 aaPredicted RBP4.14□□□□□ -1.75
SCARNA11.3-201ENST00000517276 G3V3G9 751 aa4.13□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ZNF16P17020 682 aaPredicted RBP4.13□□□□□ -1.75
SCARNA11.3-201ENST00000517276 CTDSPL2Q05D32 466 aa4.13□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TMEM164Q5U3C3 297 aa4.13□□□□□ -1.75
SCARNA11.3-201ENST00000517276 PHLDB3Q6NSJ2 640 aa4.13□□□□□ -1.75
SCARNA11.3-201ENST00000517276 EPS8L1Q8TE68 723 aa4.13□□□□□ -1.75
SCARNA11.3-201ENST00000517276 STK32AQ8WU08 396 aa4.13□□□□□ -1.75
SCARNA11.3-201ENST00000517276 DDX11L8A8MPP1 907 aa4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 IRX5P78411 483 aaPredicted RBP4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TYW1BQ6NUM6 668 aa4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 PIP4P2Q8N4L2 257 aa4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TTC13Q8NBP0 860 aa4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 LRRN4Q8WUT4 740 aa4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 PTCD2Q8WV60 388 aaKnown RBP4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SLAIN2Q9P270 581 aa4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ZMIZ1Q9ULJ6 1067 aa4.12□□□□□ -1.75
SCARNA11.3-201ENST00000517276 RCCD1A6NED2 376 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TCF3P15923 654 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SCNN1AP37088 669 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 GUCA2AQ02747 115 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 POTEDQ86YR6 584 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 CCDC125Q86Z20 511 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 RBM46Q8TBY0 533 aaKnown RBP4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 CCER1Q8TC90 406 aaPredicted RBP4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 GIPC2Q8TF65 315 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 L3MBTL3Q96JM7 780 aaPredicted RBP4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 BCL2L13Q9BXK5 485 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 FAM198AQ9UFP1 575 aa4.11□□□□□ -1.75
SCARNA11.3-201ENST00000517276 PPM1GO15355 546 aaPredicted RBP4.1□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SMARCA5O60264 1052 aaPredicted RBP4.1□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SERPINB4P48594 390 aa4.1□□□□□ -1.75
SCARNA11.3-201ENST00000517276 C6orf132Q5T0Z8 1188 aa4.1□□□□□ -1.75
SCARNA11.3-201ENST00000517276 KANK4Q5T7N3 995 aaPredicted RBP4.1□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TSC1Q92574 1164 aa4.1□□□□□ -1.75
SCARNA11.3-201ENST00000517276 HLA-CQ95604 372 aa4.1□□□□□ -1.75
SCARNA11.3-201ENST00000517276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 C3orf80F5H4A9 247 aa4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 PIK3CDO00329 1044 aa4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 GALR2O43603 387 aaPredicted RBP4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ATP9BO43861 1147 aa4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ATN1P54259 1190 aaPredicted RBP4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 TAGLNQ01995 201 aaKnown RBP4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SEMA3FQ13275 785 aa4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 B4GALNT3Q6L9W6 998 aa4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 ZBTB3Q9H5J0 574 aa4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 OCEL1Q9H607 264 aa4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 PPP1R1BQ9UD71 204 aaPredicted RBP4.09□□□□□ -1.75
SCARNA11.3-201ENST00000517276 SOWAHDA6NJG2 315 aa4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 PRSS12P56730 875 aa4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 PRPF38BQ5VTL8 546 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms