RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
RN7SKP248-201ENST00000516278 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
RN7SKP248-201ENST00000516278 SLC24A3Q9HC58 644 aa10.26□□□□□ -0.77
RN7SKP248-201ENST00000516278 SWT1Q5T5J6 900 aaKnown RBP10.25□□□□□ -0.77
RN7SKP248-201ENST00000516278 SLF2Q8IX21 1173 aa10.24□□□□□ -0.77
RN7SKP248-201ENST00000516278 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
RN7SKP248-201ENST00000516278 BCAMP50895 628 aa10.23□□□□□ -0.77
RN7SKP248-201ENST00000516278 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
RN7SKP248-201ENST00000516278 HCSTQ9UBK5 93 aa10.23□□□□□ -0.77
RN7SKP248-201ENST00000516278 TRIM66O15016 1216 aa10.22□□□□□ -0.77
RN7SKP248-201ENST00000516278 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
RN7SKP248-201ENST00000516278 TSR3Q9UJK0 312 aaKnown RBP10.22□□□□□ -0.77
RN7SKP248-201ENST00000516278 PPP4CP60510 307 aa10.21□□□□□ -0.77
RN7SKP248-201ENST00000516278 AMHR2Q16671 573 aa10.21□□□□□ -0.77
RN7SKP248-201ENST00000516278 RSPH4AQ5TD94 716 aa10.21□□□□□ -0.77
RN7SKP248-201ENST00000516278 CLCN1P35523 988 aa10.2□□□□□ -0.78
RN7SKP248-201ENST00000516278 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
RN7SKP248-201ENST00000516278 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
RN7SKP248-201ENST00000516278 PTPN5P54829 565 aa10.19□□□□□ -0.78
RN7SKP248-201ENST00000516278 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
RN7SKP248-201ENST00000516278 NYAP1Q6ZVC0 841 aa10.19□□□□□ -0.78
RN7SKP248-201ENST00000516278 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
RN7SKP248-201ENST00000516278 RNF40O75150 1001 aa10.18□□□□□ -0.78
RN7SKP248-201ENST00000516278 SULF1Q8IWU6 871 aa10.18□□□□□ -0.78
RN7SKP248-201ENST00000516278 GPCPD1Q9NPB8 672 aa10.18□□□□□ -0.78
RN7SKP248-201ENST00000516278 WBP1LQ9NX94 342 aa10.17□□□□□ -0.78
RN7SKP248-201ENST00000516278 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
RN7SKP248-201ENST00000516278 TTLL12Q14166 644 aaPredicted RBP10.16□□□□□ -0.78
RN7SKP248-201ENST00000516278 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
RN7SKP248-201ENST00000516278 PDE4DQ08499 809 aa10.15□□□□□ -0.78
RN7SKP248-201ENST00000516278 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
RN7SKP248-201ENST00000516278 SLC10A3P09131 477 aa10.13□□□□□ -0.79
RN7SKP248-201ENST00000516278 PRKCSHP14314 528 aaPredicted RBP10.13□□□□□ -0.79
RN7SKP248-201ENST00000516278 PRR14Q9BWN1 585 aa10.13□□□□□ -0.79
RN7SKP248-201ENST00000516278 RDH13Q8NBN7 331 aa10.12□□□□□ -0.79
RN7SKP248-201ENST00000516278 REPIN1Q9BWE0 567 aaKnown RBP10.12□□□□□ -0.79
RN7SKP248-201ENST00000516278 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
RN7SKP248-201ENST00000516278 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
RN7SKP248-201ENST00000516278 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
RN7SKP248-201ENST00000516278 KMT5BQ4FZB7 885 aa10.1□□□□□ -0.79
RN7SKP248-201ENST00000516278 CD46P15529 392 aa10.09□□□□□ -0.79
RN7SKP248-201ENST00000516278 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
RN7SKP248-201ENST00000516278 CFHP08603 1231 aa10.08□□□□□ -0.8
RN7SKP248-201ENST00000516278 APLP1P51693 650 aa10.08□□□□□ -0.8
RN7SKP248-201ENST00000516278 GCGRP47871 477 aa10.07□□□□□ -0.8
RN7SKP248-201ENST00000516278 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
RN7SKP248-201ENST00000516278 ZCCHC6Q5VYS8 1495 aaKnown RBP10.05□□□□□ -0.8
RN7SKP248-201ENST00000516278 MS4A1P11836 297 aa10.02□□□□□ -0.81
RN7SKP248-201ENST00000516278 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
RN7SKP248-201ENST00000516278 KDM4CQ9H3R0 1056 aa10.02□□□□□ -0.81
RN7SKP248-201ENST00000516278 PCDHB3Q9Y5E6 796 aa10.02□□□□□ -0.81
RN7SKP248-201ENST00000516278 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.81
RN7SKP248-201ENST00000516278 SUPT5HO00267 1087 aaKnown RBP10.01□□□□□ -0.81
RN7SKP248-201ENST00000516278 KDM4AO75164 1064 aa10.01□□□□□ -0.81
RN7SKP248-201ENST00000516278 ATP6V1AP38606 617 aa10.01□□□□□ -0.81
RN7SKP248-201ENST00000516278 USP46P62068 366 aa10.01□□□□□ -0.81
RN7SKP248-201ENST00000516278 NUTM1Q86Y26 1132 aa10.01□□□□□ -0.81
RN7SKP248-201ENST00000516278 BEGAINQ9BUH8 593 aa10.01□□□□□ -0.81
RN7SKP248-201ENST00000516278 TRIM26Q12899 539 aaPredicted RBP10□□□□□ -0.81
RN7SKP248-201ENST00000516278 NEUROD2Q15784 382 aa10□□□□□ -0.81
RN7SKP248-201ENST00000516278 PCGF6Q9BYE7 350 aa10□□□□□ -0.81
RN7SKP248-201ENST00000516278 GPBP1L1Q9HC44 474 aaPredicted RBP10□□□□□ -0.81
RN7SKP248-201ENST00000516278 FUT2Q10981 343 aa9.99□□□□□ -0.81
RN7SKP248-201ENST00000516278 DIXDC1Q155Q3 683 aa9.99□□□□□ -0.81
RN7SKP248-201ENST00000516278 TJAP1Q5JTD0 557 aa9.99□□□□□ -0.81
RN7SKP248-201ENST00000516278 ITGBL1O95965 494 aaPredicted RBP9.98□□□□□ -0.81
RN7SKP248-201ENST00000516278 MTRQ99707 1265 aa9.98□□□□□ -0.81
RN7SKP248-201ENST00000516278 IL21Q9HBE4 155 aa9.98□□□□□ -0.81
RN7SKP248-201ENST00000516278 NR1I2O75469 434 aa9.97□□□□□ -0.81
RN7SKP248-201ENST00000516278 BRPF1P55201 1214 aaPredicted RBP9.97□□□□□ -0.81
RN7SKP248-201ENST00000516278 KCNC4Q03721 635 aa9.97□□□□□ -0.81
RN7SKP248-201ENST00000516278 COPS2P61201 443 aa9.96□□□□□ -0.82
RN7SKP248-201ENST00000516278 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
RN7SKP248-201ENST00000516278 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
RN7SKP248-201ENST00000516278 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
RN7SKP248-201ENST00000516278 PUS10Q3MIT2 529 aaKnown RBP9.95□□□□□ -0.82
RN7SKP248-201ENST00000516278 MORN1Q5T089 497 aa9.95□□□□□ -0.82
RN7SKP248-201ENST00000516278 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
RN7SKP248-201ENST00000516278 SCUBE3Q8IX30 993 aa9.95□□□□□ -0.82
RN7SKP248-201ENST00000516278 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
RN7SKP248-201ENST00000516278 HOXA2O43364 376 aa9.93□□□□□ -0.82
RN7SKP248-201ENST00000516278 ZPR1O75312 459 aa9.93□□□□□ -0.82
RN7SKP248-201ENST00000516278 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
RN7SKP248-201ENST00000516278 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
RN7SKP248-201ENST00000516278 SHROOM4Q9ULL8 1493 aa9.92□□□□□ -0.82
RN7SKP248-201ENST00000516278 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
RN7SKP248-201ENST00000516278 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
RN7SKP248-201ENST00000516278 SLC27A5Q9Y2P5 690 aa9.91□□□□□ -0.82
RN7SKP248-201ENST00000516278 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
RN7SKP248-201ENST00000516278 GJA5P36382 358 aa9.9□□□□□ -0.82
RN7SKP248-201ENST00000516278 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
RN7SKP248-201ENST00000516278 Q3C1V9 767 aa9.89□□□□□ -0.83
RN7SKP248-201ENST00000516278 FDX1P10109 184 aa9.88□□□□□ -0.83
RN7SKP248-201ENST00000516278 FMNL1O95466 1100 aaPredicted RBP9.87□□□□□ -0.83
RN7SKP248-201ENST00000516278 PLEKHG3A1L390 1219 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 SPTLC1O15269 473 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 NDUFV2P19404 249 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 BRICD5Q6PL45 260 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 RIC3Q7Z5B4 369 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms