RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
RNU6-1278P-201ENST00000516130 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
RNU6-1278P-201ENST00000516130 SPDYE16A6NNV3 312 aaPredicted RBP6.64□□□□□ -1.35
RNU6-1278P-201ENST00000516130 ST8SIA5O15466 376 aa6.64□□□□□ -1.35
RNU6-1278P-201ENST00000516130 SWT1Q5T5J6 900 aaKnown RBP6.64□□□□□ -1.35
RNU6-1278P-201ENST00000516130 LIAT1Q6ZQX7 453 aa6.64□□□□□ -1.35
RNU6-1278P-201ENST00000516130 PRIM1P49642 420 aaKnown RBP6.63□□□□□ -1.35
RNU6-1278P-201ENST00000516130 INSM1Q01101 510 aaPredicted RBP6.63□□□□□ -1.35
RNU6-1278P-201ENST00000516130 TTC13Q8NBP0 860 aa6.63□□□□□ -1.35
RNU6-1278P-201ENST00000516130 PCDHB3Q9Y5E6 796 aa6.63□□□□□ -1.35
RNU6-1278P-201ENST00000516130 TNFRSF10AO00220 468 aa6.62□□□□□ -1.35
RNU6-1278P-201ENST00000516130 NFX1Q12986 1120 aaKnown RBP6.62□□□□□ -1.35
RNU6-1278P-201ENST00000516130 LMOD2Q6P5Q4 547 aa6.62□□□□□ -1.35
RNU6-1278P-201ENST00000516130 SLC4A3P48751 1232 aa6.61□□□□□ -1.35
RNU6-1278P-201ENST00000516130 AVPP01185 164 aa6.6□□□□□ -1.35
RNU6-1278P-201ENST00000516130 BLOC1S3Q6QNY0 202 aa6.6□□□□□ -1.35
RNU6-1278P-201ENST00000516130 TLL1O43897 1013 aa6.59□□□□□ -1.35
RNU6-1278P-201ENST00000516130 S1PR4O95977 384 aa6.58□□□□□ -1.36
RNU6-1278P-201ENST00000516130 CDHR5Q9HBB8 845 aa6.58□□□□□ -1.36
RNU6-1278P-201ENST00000516130 PPEF1O14829 653 aaPredicted RBP6.57□□□□□ -1.36
RNU6-1278P-201ENST00000516130 PKD2L1Q9P0L9 805 aa6.57□□□□□ -1.36
RNU6-1278P-201ENST00000516130 SMCPP49901 116 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1278P-201ENST00000516130 CTC1Q2NKJ3 1217 aa6.56□□□□□ -1.36
RNU6-1278P-201ENST00000516130 EYA1Q99502 592 aa6.56□□□□□ -1.36
RNU6-1278P-201ENST00000516130 GMPR2Q9P2T1 348 aaKnown RBP6.56□□□□□ -1.36
RNU6-1278P-201ENST00000516130 DACH1Q9UI36 760 aa6.56□□□□□ -1.36
RNU6-1278P-201ENST00000516130 ARIH1Q9Y4X5 557 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1278P-201ENST00000516130 C11orf95C9JLR9 678 aaPredicted RBP6.55□□□□□ -1.36
RNU6-1278P-201ENST00000516130 OSBPP22059 807 aa6.55□□□□□ -1.36
RNU6-1278P-201ENST00000516130 AXIN1O15169 862 aa6.54□□□□□ -1.36
RNU6-1278P-201ENST00000516130 ACTN4O43707 911 aaKnown RBP6.54□□□□□ -1.36
RNU6-1278P-201ENST00000516130 ADH1BP00325 375 aa6.54□□□□□ -1.36
RNU6-1278P-201ENST00000516130 PLA2G2CQ5R387 149 aa6.54□□□□□ -1.36
RNU6-1278P-201ENST00000516130 PADI6Q6TGC4 694 aa6.54□□□□□ -1.36
RNU6-1278P-201ENST00000516130 NPDC1Q9NQX5 325 aaPredicted RBP6.54□□□□□ -1.36
RNU6-1278P-201ENST00000516130 TOR4AQ9NXH8 423 aa6.54□□□□□ -1.36
RNU6-1278P-201ENST00000516130 GRXCR2A6NFK2 248 aa6.53□□□□□ -1.36
RNU6-1278P-201ENST00000516130 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
RNU6-1278P-201ENST00000516130 KMT5BQ4FZB7 885 aa6.51□□□□□ -1.37
RNU6-1278P-201ENST00000516130 SLC6A16Q9GZN6 736 aa6.51□□□□□ -1.37
RNU6-1278P-201ENST00000516130 RPIAP49247 311 aa6.5□□□□□ -1.37
RNU6-1278P-201ENST00000516130 FOXC1Q12948 553 aa6.5□□□□□ -1.37
RNU6-1278P-201ENST00000516130 TERTO14746 1132 aaKnown RBP6.49□□□□□ -1.37
RNU6-1278P-201ENST00000516130 NR1I2O75469 434 aa6.49□□□□□ -1.37
RNU6-1278P-201ENST00000516130 FAM181BA6NEQ2 426 aa6.48□□□□□ -1.37
RNU6-1278P-201ENST00000516130 DNAJB2P25686 324 aa6.48□□□□□ -1.37
RNU6-1278P-201ENST00000516130 TMEM134Q9H6X4 195 aa6.48□□□□□ -1.37
RNU6-1278P-201ENST00000516130 CYP4X1Q8N118 509 aa6.47□□□□□ -1.37
RNU6-1278P-201ENST00000516130 CFHP08603 1231 aa6.46□□□□□ -1.38
RNU6-1278P-201ENST00000516130 E2F4Q16254 413 aa6.45□□□□□ -1.38
RNU6-1278P-201ENST00000516130 TRIM47Q96LD4 638 aa6.45□□□□□ -1.38
RNU6-1278P-201ENST00000516130 CD2BP2O95400 341 aaKnown RBP6.44□□□□□ -1.38
RNU6-1278P-201ENST00000516130 SNRPBP14678 240 aaKnown RBP6.44□□□□□ -1.38
RNU6-1278P-201ENST00000516130 SENP2Q9HC62 589 aa6.44□□□□□ -1.38
RNU6-1278P-201ENST00000516130 ATP13A2Q9NQ11 1180 aa6.44□□□□□ -1.38
RNU6-1278P-201ENST00000516130 SCUBE3Q8IX30 993 aa6.43□□□□□ -1.38
RNU6-1278P-201ENST00000516130 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
RNU6-1278P-201ENST00000516130 RBM46Q8TBY0 533 aaKnown RBP6.42□□□□□ -1.38
RNU6-1278P-201ENST00000516130 SPSB2Q99619 263 aa6.42□□□□□ -1.38
RNU6-1278P-201ENST00000516130 SLC10A3P09131 477 aa6.41□□□□□ -1.38
RNU6-1278P-201ENST00000516130 KIFC2Q96AC6 838 aa6.4□□□□□ -1.38
RNU6-1278P-201ENST00000516130 ADGRG1Q9Y653 693 aa6.4□□□□□ -1.38
RNU6-1278P-201ENST00000516130 RCCD1A6NED2 376 aa6.39□□□□□ -1.39
RNU6-1278P-201ENST00000516130 SMPD1P17405 629 aa6.39□□□□□ -1.39
RNU6-1278P-201ENST00000516130 SUZ12Q15022 739 aaKnown RBP6.39□□□□□ -1.39
RNU6-1278P-201ENST00000516130 ZSCAN1Q8NBB4 408 aa6.39□□□□□ -1.39
RNU6-1278P-201ENST00000516130 FCF1Q9Y324 198 aaKnown RBP6.39□□□□□ -1.39
RNU6-1278P-201ENST00000516130 TTC24A2A3L6 582 aaPredicted RBP6.38□□□□□ -1.39
RNU6-1278P-201ENST00000516130 WNT7AO00755 349 aa6.37□□□□□ -1.39
RNU6-1278P-201ENST00000516130 NPAS3Q8IXF0 933 aa6.37□□□□□ -1.39
RNU6-1278P-201ENST00000516130 SNIP1Q8TAD8 396 aaKnown RBP6.37□□□□□ -1.39
RNU6-1278P-201ENST00000516130 SLC16A10Q8TF71 515 aa6.37□□□□□ -1.39
RNU6-1278P-201ENST00000516130 PTGDRQ13258 359 aa6.36□□□□□ -1.39
RNU6-1278P-201ENST00000516130 THAP11Q96EK4 314 aa6.36□□□□□ -1.39
RNU6-1278P-201ENST00000516130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.35□□□□□ -1.39
RNU6-1278P-201ENST00000516130 GMPRP36959 345 aa6.35□□□□□ -1.39
RNU6-1278P-201ENST00000516130 NXF1Q9UBU9 619 aaKnown RBP6.35□□□□□ -1.39
RNU6-1278P-201ENST00000516130 PUS10Q3MIT2 529 aaKnown RBP6.34□□□□□ -1.39
RNU6-1278P-201ENST00000516130 FAM160A2Q8N612 972 aaPredicted RBP6.33□□□□□ -1.4
RNU6-1278P-201ENST00000516130 IRF7Q92985 503 aa6.33□□□□□ -1.4
RNU6-1278P-201ENST00000516130 MORN1Q5T089 497 aa6.32□□□□□ -1.4
RNU6-1278P-201ENST00000516130 SALL2Q9Y467 1007 aaPredicted RBP6.32□□□□□ -1.4
RNU6-1278P-201ENST00000516130 J3QL48 77 aa6.31□□□□□ -1.4
RNU6-1278P-201ENST00000516130 ZBTB24O43167 697 aaPredicted RBP6.31□□□□□ -1.4
RNU6-1278P-201ENST00000516130 DCAF8L2P0C7V8 631 aa6.31□□□□□ -1.4
RNU6-1278P-201ENST00000516130 RSPH4AQ5TD94 716 aa6.31□□□□□ -1.4
RNU6-1278P-201ENST00000516130 HPS1Q92902 700 aa6.3□□□□□ -1.4
RNU6-1278P-201ENST00000516130 MRGPRX2Q96LB1 330 aa6.3□□□□□ -1.4
RNU6-1278P-201ENST00000516130 WDR70Q9NW82 654 aa6.3□□□□□ -1.4
RNU6-1278P-201ENST00000516130 H3BM21 787 aa6.29□□□□□ -1.4
RNU6-1278P-201ENST00000516130 FMNL1O95466 1100 aaPredicted RBP6.29□□□□□ -1.4
RNU6-1278P-201ENST00000516130 TRIM32Q13049 653 aa6.29□□□□□ -1.4
RNU6-1278P-201ENST00000516130 MSS51Q4VC12 460 aa6.29□□□□□ -1.4
RNU6-1278P-201ENST00000516130 REPIN1Q9BWE0 567 aaKnown RBP6.29□□□□□ -1.4
RNU6-1278P-201ENST00000516130 FAM161AQ3B820 660 aa6.28□□□□□ -1.4
RNU6-1278P-201ENST00000516130 PXYLP1Q8TE99 480 aa6.28□□□□□ -1.4
RNU6-1278P-201ENST00000516130 PRDM9Q9NQV7 894 aa6.28□□□□□ -1.4
RNU6-1278P-201ENST00000516130 OATP04181 439 aa6.27□□□□□ -1.41
RNU6-1278P-201ENST00000516130 ATP6V1AP38606 617 aa6.27□□□□□ -1.41
RNU6-1278P-201ENST00000516130 BRICD5Q6PL45 260 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms