RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 FBXO31Q5XUX0 539 aaPredicted RBP12.49□□□□□ -0.41
CAST-244ENST00000515663 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
CAST-244ENST00000515663 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
CAST-244ENST00000515663 LAMC1P11047 1609 aa12.48□□□□□ -0.41
CAST-244ENST00000515663 MADDQ8WXG6 1647 aa12.48□□□□□ -0.41
CAST-244ENST00000515663 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
CAST-244ENST00000515663 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
CAST-244ENST00000515663 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
CAST-244ENST00000515663 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.41
CAST-244ENST00000515663 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
CAST-244ENST00000515663 TMEM131LA2VDJ0 1609 aa12.46□□□□□ -0.41
CAST-244ENST00000515663 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.42
CAST-244ENST00000515663 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.42
CAST-244ENST00000515663 USP47Q96K76 1375 aa12.46□□□□□ -0.42
CAST-244ENST00000515663 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
CAST-244ENST00000515663 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
CAST-244ENST00000515663 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
CAST-244ENST00000515663 HIRIP3Q9BW71 556 aaPredicted RBP12.44□□□□□ -0.42
CAST-244ENST00000515663 NEXMIFQ5QGS0 1516 aa12.44□□□□□ -0.42
CAST-244ENST00000515663 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
CAST-244ENST00000515663 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
CAST-244ENST00000515663 PPLO60437 1756 aa12.42□□□□□ -0.42
CAST-244ENST00000515663 C14orf93Q9H972 538 aaKnown RBP12.42□□□□□ -0.42
CAST-244ENST00000515663 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
CAST-244ENST00000515663 TNRQ92752 1358 aa12.42□□□□□ -0.42
CAST-244ENST00000515663 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
CAST-244ENST00000515663 CFAP65Q6ZU64 1925 aaKnown RBP12.41□□□□□ -0.42
CAST-244ENST00000515663 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
CAST-244ENST00000515663 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
CAST-244ENST00000515663 KDM5AP29375 1690 aaKnown RBP12.4□□□□□ -0.42
CAST-244ENST00000515663 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
CAST-244ENST00000515663 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
CAST-244ENST00000515663 NLRP1Q9C000 1473 aa12.39□□□□□ -0.43
CAST-244ENST00000515663 ST20-MTHFSA0A0A6YYL1 179 aa12.39□□□□□ -0.43
CAST-244ENST00000515663 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
CAST-244ENST00000515663 SCAF11Q99590 1463 aaKnown RBP12.38□□□□□ -0.43
CAST-244ENST00000515663 ADAMTSL3P82987 1691 aa12.38□□□□□ -0.43
CAST-244ENST00000515663 C3P01024 1663 aa12.37□□□□□ -0.43
CAST-244ENST00000515663 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
CAST-244ENST00000515663 TESK2Q96S53 571 aa12.37□□□□□ -0.43
CAST-244ENST00000515663 FER1L4A9Z1Z3 1794 aa12.37□□□□□ -0.43
CAST-244ENST00000515663 ADGRB1O14514 1584 aa12.36□□□□□ -0.43
CAST-244ENST00000515663 IQGAP1P46940 1657 aa12.36□□□□□ -0.43
CAST-244ENST00000515663 DDX10Q13206 875 aaKnown RBP12.36□□□□□ -0.43
CAST-244ENST00000515663 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
CAST-244ENST00000515663 CEBPAP49715 358 aaPredicted RBP12.35□□□□□ -0.43
CAST-244ENST00000515663 POLR1AO95602 1720 aaPredicted RBP12.34□□□□□ -0.43
CAST-244ENST00000515663 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.34□□□□□ -0.43
CAST-244ENST00000515663 RIMS2Q9UQ26 1411 aa12.34□□□□□ -0.43
CAST-244ENST00000515663 MYO5BQ9ULV0 1848 aa12.34□□□□□ -0.43
CAST-244ENST00000515663 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
CAST-244ENST00000515663 TMEM2Q9UHN6 1383 aa12.33□□□□□ -0.44
CAST-244ENST00000515663 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
CAST-244ENST00000515663 HDGFP51858 240 aaKnown RBP12.33□□□□□ -0.44
CAST-244ENST00000515663 UBR1Q8IWV7 1749 aa12.32□□□□□ -0.44
CAST-244ENST00000515663 SBNO2Q9Y2G9 1366 aa12.32□□□□□ -0.44
CAST-244ENST00000515663 MIER1Q8N108 512 aa12.32□□□□□ -0.44
CAST-244ENST00000515663 ARHGAP23Q9P227 1491 aa12.31□□□□□ -0.44
CAST-244ENST00000515663 EIF3AQ14152 1382 aaKnown RBP12.31□□□□□ -0.44
CAST-244ENST00000515663 SLIT1O75093 1534 aa12.3□□□□□ -0.44
CAST-244ENST00000515663 MYO3AQ8NEV4 1616 aa12.3□□□□□ -0.44
CAST-244ENST00000515663 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
CAST-244ENST00000515663 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
CAST-244ENST00000515663 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
CAST-244ENST00000515663 RIMS1Q86UR5 1692 aaKnown RBP12.28□□□□□ -0.44
CAST-244ENST00000515663 TMF1P82094 1093 aa12.28□□□□□ -0.44
CAST-244ENST00000515663 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.44
CAST-244ENST00000515663 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.44
CAST-244ENST00000515663 DISP3Q9P2K9 1392 aa12.27□□□□□ -0.44
CAST-244ENST00000515663 PTPRMP28827 1452 aa12.27□□□□□ -0.45
CAST-244ENST00000515663 PLEKHG1Q9ULL1 1385 aa12.26□□□□□ -0.45
CAST-244ENST00000515663 NRXN3Q9Y4C0 1643 aa12.26□□□□□ -0.45
CAST-244ENST00000515663 SETD1AO15047 1707 aaKnown RBP12.25□□□□□ -0.45
CAST-244ENST00000515663 MED14O60244 1454 aa12.25□□□□□ -0.45
CAST-244ENST00000515663 YTHDC2Q9H6S0 1430 aaKnown RBP12.25□□□□□ -0.45
CAST-244ENST00000515663 LTKP29376 864 aa12.25□□□□□ -0.45
CAST-244ENST00000515663 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
CAST-244ENST00000515663 PUS7Q96PZ0 661 aaKnown RBP12.25□□□□□ -0.45
CAST-244ENST00000515663 ABCC11Q96J66 1382 aa12.25□□□□□ -0.45
CAST-244ENST00000515663 CEP170BQ9Y4F5 1589 aaPredicted RBP12.25□□□□□ -0.45
CAST-244ENST00000515663 CENPJQ9HC77 1338 aaPredicted RBP12.24□□□□□ -0.45
CAST-244ENST00000515663 SIRT1Q96EB6 747 aa12.24□□□□□ -0.45
CAST-244ENST00000515663 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
CAST-244ENST00000515663 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
CAST-244ENST00000515663 ADAMTS13Q76LX8 1427 aa12.24□□□□□ -0.45
CAST-244ENST00000515663 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
CAST-244ENST00000515663 ZNF142P52746 1687 aaPredicted RBP12.23□□□□□ -0.45
CAST-244ENST00000515663 TXNDC2Q86VQ3 553 aa12.22□□□□□ -0.45
CAST-244ENST00000515663 TECPR2O15040 1411 aa12.22□□□□□ -0.45
CAST-244ENST00000515663 ARHGEF28Q8N1W1 1705 aaKnown RBP12.22□□□□□ -0.45
CAST-244ENST00000515663 ANP32CO43423 234 aa12.21□□□□□ -0.45
CAST-244ENST00000515663 EID1Q9Y6B2 187 aa12.21□□□□□ -0.45
CAST-244ENST00000515663 METP08581 1390 aa12.21□□□□□ -0.46
CAST-244ENST00000515663 CCER2I3L3R5 266 aa12.21□□□□□ -0.46
CAST-244ENST00000515663 PER1O15534 1290 aaPredicted RBP12.21□□□□□ -0.46
CAST-244ENST00000515663 TBX22Q9Y458 520 aa12.21□□□□□ -0.46
CAST-244ENST00000515663 SETD1BQ9UPS6 1966 aaKnown RBP12.2□□□□□ -0.46
CAST-244ENST00000515663 FAM135BQ49AJ0 1406 aa12.19□□□□□ -0.46
CAST-244ENST00000515663 PRKRIP1Q9H875 184 aaPredicted RBP12.18□□□□□ -0.46
CAST-244ENST00000515663 DIP2AQ14689 1571 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms