RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
SMARCA5-203ENST00000515531 RNF40O75150 1001 aa11.02□□□□□ -0.65
SMARCA5-203ENST00000515531 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
SMARCA5-203ENST00000515531 NLRP7Q8WX94 980 aa11.02□□□□□ -0.65
SMARCA5-203ENST00000515531 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
SMARCA5-203ENST00000515531 SOWAHBA6NEL2 793 aa11□□□□□ -0.65
SMARCA5-203ENST00000515531 CLCN1P35523 988 aa11□□□□□ -0.65
SMARCA5-203ENST00000515531 MDM2Q00987 491 aaPredicted RBP11□□□□□ -0.65
SMARCA5-203ENST00000515531 TTLL12Q14166 644 aaPredicted RBP11□□□□□ -0.65
SMARCA5-203ENST00000515531 SLF2Q8IX21 1173 aa11□□□□□ -0.65
SMARCA5-203ENST00000515531 AMHR2Q16671 573 aa10.99□□□□□ -0.65
SMARCA5-203ENST00000515531 BCAMP50895 628 aa10.98□□□□□ -0.65
SMARCA5-203ENST00000515531 PDE4DQ08499 809 aa10.98□□□□□ -0.65
SMARCA5-203ENST00000515531 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
SMARCA5-203ENST00000515531 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
SMARCA5-203ENST00000515531 PPP4CP60510 307 aa10.97□□□□□ -0.65
SMARCA5-203ENST00000515531 THSD4Q6ZMP0 1018 aa10.97□□□□□ -0.65
SMARCA5-203ENST00000515531 SULF1Q8IWU6 871 aa10.97□□□□□ -0.65
SMARCA5-203ENST00000515531 PTPN5P54829 565 aa10.96□□□□□ -0.65
SMARCA5-203ENST00000515531 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
SMARCA5-203ENST00000515531 HCSTQ9UBK5 93 aa10.96□□□□□ -0.65
SMARCA5-203ENST00000515531 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
SMARCA5-203ENST00000515531 TSR3Q9UJK0 312 aaKnown RBP10.95□□□□□ -0.66
SMARCA5-203ENST00000515531 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
SMARCA5-203ENST00000515531 RDH13Q8NBN7 331 aa10.93□□□□□ -0.66
SMARCA5-203ENST00000515531 GIGYF2Q6Y7W6 1299 aaKnown RBP10.91□□□□□ -0.66
SMARCA5-203ENST00000515531 PARP9Q8IXQ6 854 aa10.91□□□□□ -0.66
SMARCA5-203ENST00000515531 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
SMARCA5-203ENST00000515531 TMUB1Q9BVT8 246 aa10.9□□□□□ -0.66
SMARCA5-203ENST00000515531 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
SMARCA5-203ENST00000515531 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
SMARCA5-203ENST00000515531 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
SMARCA5-203ENST00000515531 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
SMARCA5-203ENST00000515531 NYAP1Q6ZVC0 841 aa10.88□□□□□ -0.67
SMARCA5-203ENST00000515531 SLC10A3P09131 477 aa10.87□□□□□ -0.67
SMARCA5-203ENST00000515531 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
SMARCA5-203ENST00000515531 CFHP08603 1231 aa10.86□□□□□ -0.67
SMARCA5-203ENST00000515531 KMT5BQ4FZB7 885 aa10.86□□□□□ -0.67
SMARCA5-203ENST00000515531 GPBP1L1Q9HC44 474 aaPredicted RBP10.86□□□□□ -0.67
SMARCA5-203ENST00000515531 PLA2G2EQ9NZK7 142 aa10.86□□□□□ -0.67
SMARCA5-203ENST00000515531 CD46P15529 392 aa10.85□□□□□ -0.67
SMARCA5-203ENST00000515531 KDM4CQ9H3R0 1056 aa10.84□□□□□ -0.67
SMARCA5-203ENST00000515531 GCGRP47871 477 aa10.83□□□□□ -0.68
SMARCA5-203ENST00000515531 MS4A1P11836 297 aa10.82□□□□□ -0.68
SMARCA5-203ENST00000515531 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
SMARCA5-203ENST00000515531 BEGAINQ9BUH8 593 aa10.82□□□□□ -0.68
SMARCA5-203ENST00000515531 APLP1P51693 650 aa10.81□□□□□ -0.68
SMARCA5-203ENST00000515531 NUTM1Q86Y26 1132 aa10.8□□□□□ -0.68
SMARCA5-203ENST00000515531 ACTN4O43707 911 aaKnown RBP10.79□□□□□ -0.68
SMARCA5-203ENST00000515531 KDM4AO75164 1064 aa10.78□□□□□ -0.68
SMARCA5-203ENST00000515531 GRIPAP1Q4V328 841 aa10.78□□□□□ -0.68
SMARCA5-203ENST00000515531 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
SMARCA5-203ENST00000515531 FUT2Q10981 343 aa10.76□□□□□ -0.69
SMARCA5-203ENST00000515531 DIXDC1Q155Q3 683 aa10.76□□□□□ -0.69
SMARCA5-203ENST00000515531 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
SMARCA5-203ENST00000515531 ATP6V1AP38606 617 aa10.75□□□□□ -0.69
SMARCA5-203ENST00000515531 USP46P62068 366 aa10.74□□□□□ -0.69
SMARCA5-203ENST00000515531 FAM117AQ9C073 453 aa10.74□□□□□ -0.69
SMARCA5-203ENST00000515531 SPIRE2Q8WWL2 714 aa10.73□□□□□ -0.69
SMARCA5-203ENST00000515531 COPS2P61201 443 aa10.72□□□□□ -0.69
SMARCA5-203ENST00000515531 PUS10Q3MIT2 529 aaKnown RBP10.72□□□□□ -0.69
SMARCA5-203ENST00000515531 IL27Q8NEV9 243 aa10.72□□□□□ -0.69
SMARCA5-203ENST00000515531 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
SMARCA5-203ENST00000515531 MTRQ99707 1265 aa10.71□□□□□ -0.69
SMARCA5-203ENST00000515531 RSPH6AQ9H0K4 717 aa10.71□□□□□ -0.69
SMARCA5-203ENST00000515531 NR1I2O75469 434 aa10.7□□□□□ -0.7
SMARCA5-203ENST00000515531 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
SMARCA5-203ENST00000515531 HOXA2O43364 376 aa10.69□□□□□ -0.7
SMARCA5-203ENST00000515531 IL21Q9HBE4 155 aa10.69□□□□□ -0.7
SMARCA5-203ENST00000515531 KCNC4Q03721 635 aa10.68□□□□□ -0.7
SMARCA5-203ENST00000515531 TJAP1Q5JTD0 557 aa10.68□□□□□ -0.7
SMARCA5-203ENST00000515531 MORN1Q5T089 497 aa10.68□□□□□ -0.7
SMARCA5-203ENST00000515531 SCUBE3Q8IX30 993 aa10.67□□□□□ -0.7
SMARCA5-203ENST00000515531 ATP1B4Q9UN42 357 aaPredicted RBP10.67□□□□□ -0.7
SMARCA5-203ENST00000515531 PLEKHG3A1L390 1219 aa10.66□□□□□ -0.7
SMARCA5-203ENST00000515531 RGS20O76081 388 aa10.66□□□□□ -0.7
SMARCA5-203ENST00000515531 MOXD2PA6NHM9 499 aa10.65□□□□□ -0.7
SMARCA5-203ENST00000515531 ZPR1O75312 459 aa10.65□□□□□ -0.7
SMARCA5-203ENST00000515531 NDUFV2P19404 249 aa10.65□□□□□ -0.7
SMARCA5-203ENST00000515531 RIC3Q7Z5B4 369 aa10.65□□□□□ -0.7
SMARCA5-203ENST00000515531 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
SMARCA5-203ENST00000515531 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
SMARCA5-203ENST00000515531 FDX1P10109 184 aa10.64□□□□□ -0.71
SMARCA5-203ENST00000515531 Q3C1V9 767 aa10.64□□□□□ -0.71
SMARCA5-203ENST00000515531 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
SMARCA5-203ENST00000515531 HLA-CQ95604 372 aa10.64□□□□□ -0.71
SMARCA5-203ENST00000515531 GUCA2AQ02747 115 aa10.63□□□□□ -0.71
SMARCA5-203ENST00000515531 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
SMARCA5-203ENST00000515531 POLR3EQ9NVU0 708 aa10.63□□□□□ -0.71
SMARCA5-203ENST00000515531 FMNL1O95466 1100 aaPredicted RBP10.62□□□□□ -0.71
SMARCA5-203ENST00000515531 GJA5P36382 358 aa10.61□□□□□ -0.71
SMARCA5-203ENST00000515531 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
SMARCA5-203ENST00000515531 SH3D19Q5HYK7 790 aa10.61□□□□□ -0.71
SMARCA5-203ENST00000515531 RSBN1LQ6PCB5 846 aaPredicted RBP10.61□□□□□ -0.71
SMARCA5-203ENST00000515531 SPTLC1O15269 473 aa10.6□□□□□ -0.71
SMARCA5-203ENST00000515531 CLK2P49760 499 aaKnown RBP10.6□□□□□ -0.71
SMARCA5-203ENST00000515531 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
SMARCA5-203ENST00000515531 SPSB2Q99619 263 aa10.6□□□□□ -0.71
SMARCA5-203ENST00000515531 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
SMARCA5-203ENST00000515531 C6orf229H3BNL8 230 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms