RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 CADPS2Q86UW7 1296 aa21.99■■□□□ 1.11
SMAD1-216ENST00000515527 ATF3P18847 181 aa21.98■■□□□ 1.11
SMAD1-216ENST00000515527 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
SMAD1-216ENST00000515527 BRINP3Q76B58 766 aa21.96■■□□□ 1.11
SMAD1-216ENST00000515527 TRPC5Q9UL62 973 aaPredicted RBP21.96■■□□□ 1.11
SMAD1-216ENST00000515527 CEP152O94986 1710 aa21.96■■□□□ 1.11
SMAD1-216ENST00000515527 ADAMTS2O95450 1211 aa21.95■■□□□ 1.1
SMAD1-216ENST00000515527 NHSL1Q5SYE7 1610 aa21.95■■□□□ 1.1
SMAD1-216ENST00000515527 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.94■■□□□ 1.1
SMAD1-216ENST00000515527 DEFB132Q7Z7B7 95 aa21.94■■□□□ 1.1
SMAD1-216ENST00000515527 USP21Q9UK80 565 aa21.94■■□□□ 1.1
SMAD1-216ENST00000515527 SETD5Q9C0A6 1442 aa21.94■■□□□ 1.1
SMAD1-216ENST00000515527 PSDA5PKW4 1024 aaPredicted RBP21.93■■□□□ 1.1
SMAD1-216ENST00000515527 CAMSAP2Q08AD1 1489 aa21.93■■□□□ 1.1
SMAD1-216ENST00000515527 LRRC59Q96AG4 307 aaKnown RBP21.93■■□□□ 1.1
SMAD1-216ENST00000515527 MAST1Q9Y2H9 1570 aa21.93■■□□□ 1.1
SMAD1-216ENST00000515527 CHD2O14647 1828 aaKnown RBP21.92■■□□□ 1.1
SMAD1-216ENST00000515527 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
SMAD1-216ENST00000515527 EFCAB6Q5THR3 1501 aa21.91■■□□□ 1.1
SMAD1-216ENST00000515527 BLMP54132 1417 aaPredicted RBP21.91■■□□□ 1.1
SMAD1-216ENST00000515527 NCOA3Q9Y6Q9 1424 aa21.91■■□□□ 1.1
SMAD1-216ENST00000515527 HRCP23327 699 aa21.91■■□□□ 1.1
SMAD1-216ENST00000515527 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
SMAD1-216ENST00000515527 SF3B2Q13435 895 aaKnown RBP21.89■■□□□ 1.09
SMAD1-216ENST00000515527 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
SMAD1-216ENST00000515527 SENP3-EIF4A1A0A087X0R7 540 aa21.85■■□□□ 1.09
SMAD1-216ENST00000515527 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
SMAD1-216ENST00000515527 MROH1Q8NDA8 1641 aa21.84■■□□□ 1.09
SMAD1-216ENST00000515527 ATRNO75882 1429 aa21.84■■□□□ 1.09
SMAD1-216ENST00000515527 FYCO1Q9BQS8 1478 aa21.83■■□□□ 1.09
SMAD1-216ENST00000515527 RSPH4AQ5TD94 716 aa21.81■■□□□ 1.08
SMAD1-216ENST00000515527 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
SMAD1-216ENST00000515527 TSPY4P0CV99 314 aa21.79■■□□□ 1.08
SMAD1-216ENST00000515527 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
SMAD1-216ENST00000515527 EIF2AK4Q9P2K8 1649 aaKnown RBP21.79■■□□□ 1.08
SMAD1-216ENST00000515527 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
SMAD1-216ENST00000515527 BCL9LQ86UU0 1499 aa21.78■■□□□ 1.08
SMAD1-216ENST00000515527 IDI1Q13907 227 aa21.78■■□□□ 1.08
SMAD1-216ENST00000515527 FNBP4Q8N3X1 1017 aaPredicted RBP21.78■■□□□ 1.08
SMAD1-216ENST00000515527 DDX17Q92841 729 aaKnown RBP21.77■■□□□ 1.08
SMAD1-216ENST00000515527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.07
SMAD1-216ENST00000515527 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
SMAD1-216ENST00000515527 PLEKHG1Q9ULL1 1385 aa21.72■■□□□ 1.07
SMAD1-216ENST00000515527 GJD4Q96KN9 370 aaPredicted RBP21.71■■□□□ 1.07
SMAD1-216ENST00000515527 PTCH1Q13635 1447 aa21.7■■□□□ 1.06
SMAD1-216ENST00000515527 ADGRB3O60242 1522 aa21.7■■□□□ 1.06
SMAD1-216ENST00000515527 UNC13BO14795 1591 aa21.7■■□□□ 1.06
SMAD1-216ENST00000515527 DCAF8L1A6NGE4 600 aa21.69■■□□□ 1.06
SMAD1-216ENST00000515527 TBX22Q9Y458 520 aa21.69■■□□□ 1.06
SMAD1-216ENST00000515527 DCCP43146 1447 aa21.68■■□□□ 1.06
SMAD1-216ENST00000515527 MST1RQ04912 1400 aa21.67■■□□□ 1.06
SMAD1-216ENST00000515527 R3HDM1Q15032 1099 aaKnown RBP21.67■■□□□ 1.06
SMAD1-216ENST00000515527 BRWD3Q6RI45 1802 aa21.66■■□□□ 1.06
SMAD1-216ENST00000515527 BAG6P46379 1132 aa21.66■■□□□ 1.06
SMAD1-216ENST00000515527 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
SMAD1-216ENST00000515527 HDGFP51858 240 aaKnown RBP21.62■■□□□ 1.05
SMAD1-216ENST00000515527 SPHKAPQ2M3C7 1700 aa21.61■■□□□ 1.05
SMAD1-216ENST00000515527 ZFYVE9O95405 1425 aa21.6■■□□□ 1.05
SMAD1-216ENST00000515527 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
SMAD1-216ENST00000515527 RIMS2Q9UQ26 1411 aa21.59■■□□□ 1.05
SMAD1-216ENST00000515527 MYO5BQ9ULV0 1848 aa21.59■■□□□ 1.05
SMAD1-216ENST00000515527 C1QTNF8P60827 252 aa21.58■■□□□ 1.05
SMAD1-216ENST00000515527 ZNF784Q8NCA9 323 aaPredicted RBP21.58■■□□□ 1.05
SMAD1-216ENST00000515527 AMOTL2Q9Y2J4 779 aa21.58■■□□□ 1.05
SMAD1-216ENST00000515527 PIK3R4Q99570 1358 aa21.58■■□□□ 1.04
SMAD1-216ENST00000515527 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
SMAD1-216ENST00000515527 RALGAPBQ86X10 1494 aa21.57■■□□□ 1.04
SMAD1-216ENST00000515527 GLI3P10071 1580 aa21.56■■□□□ 1.04
SMAD1-216ENST00000515527 DUOX2Q9NRD8 1548 aa21.55■■□□□ 1.04
SMAD1-216ENST00000515527 SLC52A1Q9NWF4 448 aa21.55■■□□□ 1.04
SMAD1-216ENST00000515527 KANK1Q14678 1352 aa21.55■■□□□ 1.04
SMAD1-216ENST00000515527 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
SMAD1-216ENST00000515527 MARF1Q9Y4F3 1742 aaKnown RBP21.54■■□□□ 1.04
SMAD1-216ENST00000515527 ADAMTS13Q76LX8 1427 aa21.54■■□□□ 1.04
SMAD1-216ENST00000515527 EN1Q05925 392 aaPredicted RBP21.53■■□□□ 1.04
SMAD1-216ENST00000515527 TRPM2O94759 1503 aa21.52■■□□□ 1.04
SMAD1-216ENST00000515527 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.52■■□□□ 1.03
SMAD1-216ENST00000515527 COL22A1Q8NFW1 1626 aaPredicted RBP21.51■■□□□ 1.03
SMAD1-216ENST00000515527 NOS1P29475 1434 aa21.5■■□□□ 1.03
SMAD1-216ENST00000515527 KRT27Q7Z3Y8 459 aa21.5■■□□□ 1.03
SMAD1-216ENST00000515527 PPP1R1BQ9UD71 204 aaPredicted RBP21.5■■□□□ 1.03
SMAD1-216ENST00000515527 SOS2Q07890 1332 aaPredicted RBP21.5■■□□□ 1.03
SMAD1-216ENST00000515527 PTPRUQ92729 1446 aa21.49■■□□□ 1.03
SMAD1-216ENST00000515527 UNC5CLQ8IV45 518 aa21.49■■□□□ 1.03
SMAD1-216ENST00000515527 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.49■■□□□ 1.03
SMAD1-216ENST00000515527 GCC2Q8IWJ2 1684 aa21.48■■□□□ 1.03
SMAD1-216ENST00000515527 MYOM2P54296 1465 aa21.47■■□□□ 1.03
SMAD1-216ENST00000515527 LAMC1P11047 1609 aa21.47■■□□□ 1.03
SMAD1-216ENST00000515527 CEP350Q5VT06 3117 aa21.46■■□□□ 1.03
SMAD1-216ENST00000515527 ERBINQ96RT1 1412 aa21.43■■□□□ 1.02
SMAD1-216ENST00000515527 C1orf167Q5SNV9 1468 aa21.43■■□□□ 1.02
SMAD1-216ENST00000515527 CHGAP10645 457 aaKnown RBP21.42■■□□□ 1.02
SMAD1-216ENST00000515527 LMTK2Q8IWU2 1503 aa21.42■■□□□ 1.02
SMAD1-216ENST00000515527 KIF15Q9NS87 1388 aa21.42■■□□□ 1.02
SMAD1-216ENST00000515527 CAMTA1Q9Y6Y1 1673 aa21.42■■□□□ 1.02
SMAD1-216ENST00000515527 TMEM131LA2VDJ0 1609 aa21.41■■□□□ 1.02
SMAD1-216ENST00000515527 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
SMAD1-216ENST00000515527 ADGRL3Q9HAR2 1447 aa21.41■■□□□ 1.02
SMAD1-216ENST00000515527 RGPD1P0DJD0 1748 aa21.41■■□□□ 1.02
SMAD1-216ENST00000515527 NINLQ9Y2I6 1382 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms