RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 COL16A1Q07092 1604 aaPredicted RBP23.52■■□□□ 1.36
TNPO1-210ENST00000515483 NCOA3Q9Y6Q9 1424 aa23.51■■□□□ 1.35
TNPO1-210ENST00000515483 HDGFP51858 240 aaKnown RBP23.51■■□□□ 1.35
TNPO1-210ENST00000515483 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
TNPO1-210ENST00000515483 CADPS2Q86UW7 1296 aa23.49■■□□□ 1.35
TNPO1-210ENST00000515483 CDK12Q9NYV4 1490 aaPredicted RBP23.48■■□□□ 1.35
TNPO1-210ENST00000515483 ADGRB3O60242 1522 aa23.48■■□□□ 1.35
TNPO1-210ENST00000515483 LMTK2Q8IWU2 1503 aa23.48■■□□□ 1.35
TNPO1-210ENST00000515483 PPP1R15AO75807 674 aaPredicted RBP23.47■■□□□ 1.35
TNPO1-210ENST00000515483 NOS1P29475 1434 aa23.47■■□□□ 1.35
TNPO1-210ENST00000515483 ATF3P18847 181 aa23.46■■□□□ 1.35
TNPO1-210ENST00000515483 C19orf44Q9H6X5 657 aa23.46■■□□□ 1.35
TNPO1-210ENST00000515483 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
TNPO1-210ENST00000515483 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
TNPO1-210ENST00000515483 ABCC5O15440 1437 aa23.44■■□□□ 1.34
TNPO1-210ENST00000515483 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
TNPO1-210ENST00000515483 AHDC1Q5TGY3 1603 aaPredicted RBP23.42■■□□□ 1.34
TNPO1-210ENST00000515483 NUTM2BA6NNL0 878 aaPredicted RBP23.42■■□□□ 1.34
TNPO1-210ENST00000515483 NUTM2EB1AL46 878 aaPredicted RBP23.42■■□□□ 1.34
TNPO1-210ENST00000515483 NUTM2AQ8IVF1 878 aaPredicted RBP23.42■■□□□ 1.34
TNPO1-210ENST00000515483 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
TNPO1-210ENST00000515483 SHPRHQ149N8 1683 aa23.4■■□□□ 1.34
TNPO1-210ENST00000515483 ZFYVE9O95405 1425 aa23.4■■□□□ 1.34
TNPO1-210ENST00000515483 AFF2P51816 1311 aa23.39■■□□□ 1.34
TNPO1-210ENST00000515483 VPS8Q8N3P4 1428 aa23.39■■□□□ 1.33
TNPO1-210ENST00000515483 RIMS2Q9UQ26 1411 aa23.39■■□□□ 1.33
TNPO1-210ENST00000515483 ANKRD30AQ9BXX3 1397 aa23.39■■□□□ 1.33
TNPO1-210ENST00000515483 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
TNPO1-210ENST00000515483 SRCAPQ6ZRS2 3230 aa23.38■■□□□ 1.33
TNPO1-210ENST00000515483 DAPK1P53355 1430 aa23.36■■□□□ 1.33
TNPO1-210ENST00000515483 BRINP3Q76B58 766 aa23.36■■□□□ 1.33
TNPO1-210ENST00000515483 CROCC2H7BZ55 1655 aa23.35■■□□□ 1.33
TNPO1-210ENST00000515483 RBM6P78332 1123 aaKnown RBP23.34■■□□□ 1.33
TNPO1-210ENST00000515483 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
TNPO1-210ENST00000515483 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
TNPO1-210ENST00000515483 PIK3R4Q99570 1358 aa23.33■■□□□ 1.33
TNPO1-210ENST00000515483 QTRT2Q9H974 415 aaKnown RBP23.33■■□□□ 1.33
TNPO1-210ENST00000515483 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.31■■□□□ 1.32
TNPO1-210ENST00000515483 FOXD1Q16676 465 aa23.31■■□□□ 1.32
TNPO1-210ENST00000515483 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
TNPO1-210ENST00000515483 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
TNPO1-210ENST00000515483 DIP2AQ14689 1571 aa23.3■■□□□ 1.32
TNPO1-210ENST00000515483 C8orf37Q96NL8 207 aa23.29■■□□□ 1.32
TNPO1-210ENST00000515483 SETD5Q9C0A6 1442 aa23.29■■□□□ 1.32
TNPO1-210ENST00000515483 PTPN23Q9H3S7 1636 aa23.29■■□□□ 1.32
TNPO1-210ENST00000515483 RGS12O14924 1447 aa23.28■■□□□ 1.32
TNPO1-210ENST00000515483 ADAMTS13Q76LX8 1427 aa23.28■■□□□ 1.32
TNPO1-210ENST00000515483 CHGAP10645 457 aaKnown RBP23.28■■□□□ 1.32
TNPO1-210ENST00000515483 AMOTL2Q9Y2J4 779 aa23.27■■□□□ 1.32
TNPO1-210ENST00000515483 DCCP43146 1447 aa23.26■■□□□ 1.31
TNPO1-210ENST00000515483 NGLY1Q96IV0 654 aa23.26■■□□□ 1.31
TNPO1-210ENST00000515483 TMEM131LA2VDJ0 1609 aa23.24■■□□□ 1.31
TNPO1-210ENST00000515483 ZRANB1Q9UGI0 708 aa23.23■■□□□ 1.31
TNPO1-210ENST00000515483 ATAD2Q6PL18 1390 aa23.23■■□□□ 1.31
TNPO1-210ENST00000515483 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
TNPO1-210ENST00000515483 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
TNPO1-210ENST00000515483 MYO5BQ9ULV0 1848 aa23.2■■□□□ 1.3
TNPO1-210ENST00000515483 TRPM2O94759 1503 aa23.19■■□□□ 1.3
TNPO1-210ENST00000515483 APLP2Q06481 763 aa23.19■■□□□ 1.3
TNPO1-210ENST00000515483 MST1RQ04912 1400 aa23.17■■□□□ 1.3
TNPO1-210ENST00000515483 ANKRD50Q9ULJ7 1429 aa23.17■■□□□ 1.3
TNPO1-210ENST00000515483 PNPLA6Q8IY17 1366 aa23.17■■□□□ 1.3
TNPO1-210ENST00000515483 PTPRUQ92729 1446 aa23.16■■□□□ 1.3
TNPO1-210ENST00000515483 ADGRL2O95490 1459 aa23.16■■□□□ 1.3
TNPO1-210ENST00000515483 ADAMTS2O95450 1211 aa23.15■■□□□ 1.3
TNPO1-210ENST00000515483 NHSL1Q5SYE7 1610 aa23.13■■□□□ 1.29
TNPO1-210ENST00000515483 DDX17Q92841 729 aaKnown RBP23.12■■□□□ 1.29
TNPO1-210ENST00000515483 USP21Q9UK80 565 aa23.12■■□□□ 1.29
TNPO1-210ENST00000515483 TRPC5Q9UL62 973 aaPredicted RBP23.12■■□□□ 1.29
TNPO1-210ENST00000515483 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
TNPO1-210ENST00000515483 FNBP4Q8N3X1 1017 aaPredicted RBP23.06■■□□□ 1.28
TNPO1-210ENST00000515483 ADGRL3Q9HAR2 1447 aa23.06■■□□□ 1.28
TNPO1-210ENST00000515483 UNC13BO14795 1591 aa23.06■■□□□ 1.28
TNPO1-210ENST00000515483 FAM50AQ14320 339 aaKnown RBP23.05■■□□□ 1.28
TNPO1-210ENST00000515483 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
TNPO1-210ENST00000515483 XRN1Q8IZH2 1706 aaKnown RBP23.04■■□□□ 1.28
TNPO1-210ENST00000515483 SETBP1Q9Y6X0 1596 aa23.02■■□□□ 1.28
TNPO1-210ENST00000515483 PTCH1Q13635 1447 aa23.02■■□□□ 1.28
TNPO1-210ENST00000515483 METP08581 1390 aa23.01■■□□□ 1.27
TNPO1-210ENST00000515483 ATRNO75882 1429 aa23■■□□□ 1.27
TNPO1-210ENST00000515483 SOS2Q07890 1332 aaPredicted RBP23■■□□□ 1.27
TNPO1-210ENST00000515483 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
TNPO1-210ENST00000515483 E9PCH4 1651 aa22.99■■□□□ 1.27
TNPO1-210ENST00000515483 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
TNPO1-210ENST00000515483 NRXN3Q9Y4C0 1643 aa22.96■■□□□ 1.27
TNPO1-210ENST00000515483 EP400Q96L91 3159 aa22.95■■□□□ 1.27
TNPO1-210ENST00000515483 ORAI2Q96SN7 254 aa22.94■■□□□ 1.26
TNPO1-210ENST00000515483 NUP155O75694 1391 aa22.93■■□□□ 1.26
TNPO1-210ENST00000515483 LAMC1P11047 1609 aa22.93■■□□□ 1.26
TNPO1-210ENST00000515483 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
TNPO1-210ENST00000515483 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
TNPO1-210ENST00000515483 NALCNQ8IZF0 1738 aa22.89■■□□□ 1.26
TNPO1-210ENST00000515483 BCL9LQ86UU0 1499 aa22.89■■□□□ 1.25
TNPO1-210ENST00000515483 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
TNPO1-210ENST00000515483 ROCK1Q13464 1354 aa22.87■■□□□ 1.25
TNPO1-210ENST00000515483 SF3B2Q13435 895 aaKnown RBP22.86■■□□□ 1.25
TNPO1-210ENST00000515483 MYOM2P54296 1465 aa22.85■■□□□ 1.25
TNPO1-210ENST00000515483 NPHP3Q7Z494 1330 aa22.85■■□□□ 1.25
TNPO1-210ENST00000515483 COL22A1Q8NFW1 1626 aaPredicted RBP22.84■■□□□ 1.25
TNPO1-210ENST00000515483 ROBO2Q9HCK4 1378 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms