RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	OAT	P04181	439 aa		11.78	□□□□□ -0.52
RUFY3-215	ENST00000515479	FECH	P22830	423 aa		11.78	□□□□□ -0.52
RUFY3-215	ENST00000515479	PXYLP1	Q8TE99	480 aa		11.78	□□□□□ -0.52
RUFY3-215	ENST00000515479	IL21	Q9HBE4	155 aa		11.78	□□□□□ -0.52
RUFY3-215	ENST00000515479	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.77	□□□□□ -0.53
RUFY3-215	ENST00000515479	TULP1	O00294	542 aa	Predicted RBP	11.77	□□□□□ -0.53
RUFY3-215	ENST00000515479	METTL3	Q86U44	580 aa	Known RBP	11.75	□□□□□ -0.53
RUFY3-215	ENST00000515479	PRR14	Q9BWN1	585 aa		11.75	□□□□□ -0.53
RUFY3-215	ENST00000515479	COPS2	P61201	443 aa		11.73	□□□□□ -0.53
RUFY3-215	ENST00000515479	ZNF516	Q92618	1163 aa		11.72	□□□□□ -0.53
RUFY3-215	ENST00000515479	PCDHB3	Q9Y5E6	796 aa		11.71	□□□□□ -0.53
RUFY3-215	ENST00000515479	CFH	P08603	1231 aa		11.7	□□□□□ -0.54
RUFY3-215	ENST00000515479	KMT5B	Q4FZB7	885 aa		11.7	□□□□□ -0.54
RUFY3-215	ENST00000515479	SLC10A3	P09131	477 aa		11.68	□□□□□ -0.54
RUFY3-215	ENST00000515479	BLOC1S3	Q6QNY0	202 aa		11.66	□□□□□ -0.54
RUFY3-215	ENST00000515479	NLRP7	Q8WX94	980 aa		11.66	□□□□□ -0.54
RUFY3-215	ENST00000515479	ACTN4	O43707	911 aa	Known RBP	11.65	□□□□□ -0.54
RUFY3-215	ENST00000515479	RSPH4A	Q5TD94	716 aa		11.65	□□□□□ -0.54
RUFY3-215	ENST00000515479	NKX2-3	Q8TAU0	364 aa		11.65	□□□□□ -0.54
RUFY3-215	ENST00000515479	ZPR1	O75312	459 aa		11.64	□□□□□ -0.55
RUFY3-215	ENST00000515479	PPP1R18	Q6NYC8	613 aa		11.63	□□□□□ -0.55
RUFY3-215	ENST00000515479	DAXX	Q9UER7	740 aa	Predicted RBP	11.63	□□□□□ -0.55
RUFY3-215	ENST00000515479	RDH13	Q8NBN7	331 aa		11.62	□□□□□ -0.55
RUFY3-215	ENST00000515479	PHOX2B	Q99453	314 aa		11.62	□□□□□ -0.55
RUFY3-215	ENST00000515479	MAP2K5	Q13163	448 aa		11.61	□□□□□ -0.55
RUFY3-215	ENST00000515479	IRX2	Q9BZI1	471 aa	Predicted RBP	11.61	□□□□□ -0.55
RUFY3-215	ENST00000515479	DDX11L8	A8MPP1	907 aa		11.6	□□□□□ -0.55
RUFY3-215	ENST00000515479	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.6	□□□□□ -0.55
RUFY3-215	ENST00000515479	GGCX	P38435	758 aa		11.59	□□□□□ -0.55
RUFY3-215	ENST00000515479	TLL1	O43897	1013 aa		11.58	□□□□□ -0.56
RUFY3-215	ENST00000515479	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
RUFY3-215	ENST00000515479	SULF1	Q8IWU6	871 aa		11.57	□□□□□ -0.56
RUFY3-215	ENST00000515479	NR1I2	O75469	434 aa		11.56	□□□□□ -0.56
RUFY3-215	ENST00000515479	IRF6	O14896	467 aa		11.55	□□□□□ -0.56
RUFY3-215	ENST00000515479	PUS10	Q3MIT2	529 aa	Known RBP	11.55	□□□□□ -0.56
RUFY3-215	ENST00000515479	LMOD2	Q6P5Q4	547 aa		11.55	□□□□□ -0.56
RUFY3-215	ENST00000515479	PRKD2	Q9BZL6	878 aa		11.55	□□□□□ -0.56
RUFY3-215	ENST00000515479	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.54	□□□□□ -0.56
RUFY3-215	ENST00000515479	CCDC102A	Q96A19	550 aa		11.52	□□□□□ -0.57
RUFY3-215	ENST00000515479	TMUB1	Q9BVT8	246 aa		11.52	□□□□□ -0.57
RUFY3-215	ENST00000515479	ADH1B	P00325	375 aa		11.5	□□□□□ -0.57
RUFY3-215	ENST00000515479	FUT2	Q10981	343 aa		11.5	□□□□□ -0.57
RUFY3-215	ENST00000515479	SCUBE3	Q8IX30	993 aa		11.5	□□□□□ -0.57
RUFY3-215	ENST00000515479	GCGR	P47871	477 aa		11.49	□□□□□ -0.57
RUFY3-215	ENST00000515479	MDM2	Q00987	491 aa	Predicted RBP	11.49	□□□□□ -0.57
RUFY3-215	ENST00000515479		V9GY48	417 aa	Predicted RBP	11.49	□□□□□ -0.57
RUFY3-215	ENST00000515479	RNF223	E7ERA6	249 aa		11.48	□□□□□ -0.57
RUFY3-215	ENST00000515479	S1PR4	O95977	384 aa		11.48	□□□□□ -0.57
RUFY3-215	ENST00000515479	ATP6V1A	P38606	617 aa		11.47	□□□□□ -0.57
RUFY3-215	ENST00000515479	MORN1	Q5T089	497 aa		11.46	□□□□□ -0.57
RUFY3-215	ENST00000515479	SLC6A16	Q9GZN6	736 aa		11.45	□□□□□ -0.58
RUFY3-215	ENST00000515479	PPEF1	O14829	653 aa	Predicted RBP	11.44	□□□□□ -0.58
RUFY3-215	ENST00000515479	CD46	P15529	392 aa		11.44	□□□□□ -0.58
RUFY3-215	ENST00000515479	KRI1	Q8N9T8	703 aa	Known RBP	11.44	□□□□□ -0.58
RUFY3-215	ENST00000515479	SPSB2	Q99619	263 aa		11.44	□□□□□ -0.58
RUFY3-215	ENST00000515479	ANKLE1	Q8NAG6	615 aa		11.43	□□□□□ -0.58
RUFY3-215	ENST00000515479	GRIPAP1	Q4V328	841 aa		11.42	□□□□□ -0.58
RUFY3-215	ENST00000515479	SLC27A5	Q9Y2P5	690 aa		11.42	□□□□□ -0.58
RUFY3-215	ENST00000515479	CLCN1	P35523	988 aa		11.41	□□□□□ -0.58
RUFY3-215	ENST00000515479	ZC3H15	Q8WU90	426 aa	Known RBP	11.41	□□□□□ -0.58
RUFY3-215	ENST00000515479	GPCPD1	Q9NPB8	672 aa		11.41	□□□□□ -0.58
RUFY3-215	ENST00000515479	GFRA3	O60609	400 aa		11.4	□□□□□ -0.58
RUFY3-215	ENST00000515479	SLC19A1	P41440	591 aa		11.4	□□□□□ -0.58
RUFY3-215	ENST00000515479	LAPTM4A	Q15012	233 aa		11.4	□□□□□ -0.58
RUFY3-215	ENST00000515479		Q6ZNB5	142 aa		11.4	□□□□□ -0.58
RUFY3-215	ENST00000515479	BARGIN	Q6ZT62	677 aa		11.4	□□□□□ -0.58
RUFY3-215	ENST00000515479	ZMYND10	O75800	440 aa		11.39	□□□□□ -0.59
RUFY3-215	ENST00000515479	FMNL1	O95466	1100 aa	Predicted RBP	11.39	□□□□□ -0.59
RUFY3-215	ENST00000515479	KDM4A	O75164	1064 aa		11.38	□□□□□ -0.59
RUFY3-215	ENST00000515479	THAP11	Q96EK4	314 aa		11.38	□□□□□ -0.59
RUFY3-215	ENST00000515479	EMID1	Q96A84	441 aa	Predicted RBP	11.37	□□□□□ -0.59
RUFY3-215	ENST00000515479	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.37	□□□□□ -0.59
RUFY3-215	ENST00000515479	PDZRN3	Q9UPQ7	1066 aa		11.35	□□□□□ -0.59
RUFY3-215	ENST00000515479	SALL2	Q9Y467	1007 aa	Predicted RBP	11.35	□□□□□ -0.59
RUFY3-215	ENST00000515479	USP46	P62068	366 aa		11.34	□□□□□ -0.59
RUFY3-215	ENST00000515479	TTLL12	Q14166	644 aa	Predicted RBP	11.34	□□□□□ -0.59
RUFY3-215	ENST00000515479	BRICD5	Q6PL45	260 aa		11.34	□□□□□ -0.59
RUFY3-215	ENST00000515479	RNF19B	Q6ZMZ0	732 aa		11.34	□□□□□ -0.59
RUFY3-215	ENST00000515479	NRG2	O14511	850 aa	Predicted RBP	11.33	□□□□□ -0.6
RUFY3-215	ENST00000515479		Q3C1V9	767 aa		11.33	□□□□□ -0.6
RUFY3-215	ENST00000515479	PLA2G2C	Q5R387	149 aa		11.33	□□□□□ -0.6
RUFY3-215	ENST00000515479	SPRYD7	Q5W111	196 aa		11.33	□□□□□ -0.6
RUFY3-215	ENST00000515479	LIAT1	Q6ZQX7	453 aa		11.33	□□□□□ -0.6
RUFY3-215	ENST00000515479	FAM160A2	Q8N612	972 aa	Predicted RBP	11.33	□□□□□ -0.6
RUFY3-215	ENST00000515479	PRDM9	Q9NQV7	894 aa		11.33	□□□□□ -0.6
RUFY3-215	ENST00000515479	REPIN1	Q9BWE0	567 aa	Known RBP	11.32	□□□□□ -0.6
RUFY3-215	ENST00000515479	HOXA2	O43364	376 aa		11.31	□□□□□ -0.6
RUFY3-215	ENST00000515479	NUTM1	Q86Y26	1132 aa		11.31	□□□□□ -0.6
RUFY3-215	ENST00000515479	HLA-C	Q95604	372 aa		11.31	□□□□□ -0.6
RUFY3-215	ENST00000515479	FCF1	Q9Y324	198 aa	Known RBP	11.31	□□□□□ -0.6
RUFY3-215	ENST00000515479	MSS51	Q4VC12	460 aa		11.3	□□□□□ -0.6
RUFY3-215	ENST00000515479	ZNF598	Q86UK7	904 aa	Known RBP	11.3	□□□□□ -0.6
RUFY3-215	ENST00000515479	AMHR2	Q16671	573 aa		11.29	□□□□□ -0.6
RUFY3-215	ENST00000515479	ZNF697	Q5TEC3	545 aa		11.29	□□□□□ -0.6
RUFY3-215	ENST00000515479	SSTR3	P32745	418 aa	Predicted RBP	11.28	□□□□□ -0.6
RUFY3-215	ENST00000515479	GUCA2A	Q02747	115 aa		11.27	□□□□□ -0.61
RUFY3-215	ENST00000515479	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.26	□□□□□ -0.61
RUFY3-215	ENST00000515479	TRIM67	Q6ZTA4	783 aa		11.26	□□□□□ -0.61
RUFY3-215	ENST00000515479	USB1	Q9BQ65	265 aa	Known RBP	11.25	□□□□□ -0.61
RUFY3-215	ENST00000515479	TNFRSF10A	O00220	468 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 7 ms