RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
CPNE4-213ENST00000515418 ERVK-7P63135 1459 aa12.81□□□□□ -0.36
CPNE4-213ENST00000515418 NEURL4Q96JN8 1562 aa12.8□□□□□ -0.36
CPNE4-213ENST00000515418 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
CPNE4-213ENST00000515418 MYO5BQ9ULV0 1848 aa12.8□□□□□ -0.36
CPNE4-213ENST00000515418 GPRASP1Q5JY77 1395 aa12.79□□□□□ -0.36
CPNE4-213ENST00000515418 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
CPNE4-213ENST00000515418 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
CPNE4-213ENST00000515418 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
CPNE4-213ENST00000515418 IFT172Q9UG01 1749 aa12.78□□□□□ -0.36
CPNE4-213ENST00000515418 RPGRIP1LQ68CZ1 1315 aa12.78□□□□□ -0.36
CPNE4-213ENST00000515418 PPLO60437 1756 aa12.77□□□□□ -0.37
CPNE4-213ENST00000515418 TMEM131LA2VDJ0 1609 aa12.76□□□□□ -0.37
CPNE4-213ENST00000515418 MYOM2P54296 1465 aa12.76□□□□□ -0.37
CPNE4-213ENST00000515418 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
CPNE4-213ENST00000515418 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
CPNE4-213ENST00000515418 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
CPNE4-213ENST00000515418 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
CPNE4-213ENST00000515418 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
CPNE4-213ENST00000515418 NEXMIFQ5QGS0 1516 aa12.74□□□□□ -0.37
CPNE4-213ENST00000515418 TESK2Q96S53 571 aa12.74□□□□□ -0.37
CPNE4-213ENST00000515418 TNRQ92752 1358 aa12.72□□□□□ -0.37
CPNE4-213ENST00000515418 PIK3C2GO75747 1445 aa12.72□□□□□ -0.37
CPNE4-213ENST00000515418 LAMC1P11047 1609 aa12.72□□□□□ -0.37
CPNE4-213ENST00000515418 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.37
CPNE4-213ENST00000515418 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.37
CPNE4-213ENST00000515418 A2ML1A8K2U0 1454 aa12.71□□□□□ -0.38
CPNE4-213ENST00000515418 TRAK1Q9UPV9 953 aa12.7□□□□□ -0.38
CPNE4-213ENST00000515418 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
CPNE4-213ENST00000515418 ANP32CO43423 234 aa12.7□□□□□ -0.38
CPNE4-213ENST00000515418 SCAF11Q99590 1463 aaKnown RBP12.7□□□□□ -0.38
CPNE4-213ENST00000515418 IQGAP1P46940 1657 aa12.69□□□□□ -0.38
CPNE4-213ENST00000515418 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-213ENST00000515418 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
CPNE4-213ENST00000515418 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
CPNE4-213ENST00000515418 C3P01024 1663 aa12.68□□□□□ -0.38
CPNE4-213ENST00000515418 ZFYVE9O95405 1425 aa12.67□□□□□ -0.38
CPNE4-213ENST00000515418 STK26Q9P289 416 aa12.67□□□□□ -0.38
CPNE4-213ENST00000515418 RIMS2Q9UQ26 1411 aa12.67□□□□□ -0.38
CPNE4-213ENST00000515418 TMF1P82094 1093 aa12.67□□□□□ -0.38
CPNE4-213ENST00000515418 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
CPNE4-213ENST00000515418 EIF3AQ14152 1382 aaKnown RBP12.64□□□□□ -0.39
CPNE4-213ENST00000515418 SETBP1Q9Y6X0 1596 aa12.64□□□□□ -0.39
CPNE4-213ENST00000515418 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE4-213ENST00000515418 RIMS1Q86UR5 1692 aaKnown RBP12.63□□□□□ -0.39
CPNE4-213ENST00000515418 BCANQ96GW7 911 aa12.63□□□□□ -0.39
CPNE4-213ENST00000515418 UBR1Q8IWV7 1749 aa12.63□□□□□ -0.39
CPNE4-213ENST00000515418 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
CPNE4-213ENST00000515418 LTKP29376 864 aa12.62□□□□□ -0.39
CPNE4-213ENST00000515418 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
CPNE4-213ENST00000515418 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPNE4-213ENST00000515418 TMEM2Q9UHN6 1383 aa12.61□□□□□ -0.39
CPNE4-213ENST00000515418 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
CPNE4-213ENST00000515418 PRKRIP1Q9H875 184 aaPredicted RBP12.61□□□□□ -0.39
CPNE4-213ENST00000515418 TXNDC2Q86VQ3 553 aa12.6□□□□□ -0.39
CPNE4-213ENST00000515418 PANK3Q9H999 370 aa12.6□□□□□ -0.39
CPNE4-213ENST00000515418 NLRP1Q9C000 1473 aa12.6□□□□□ -0.39
CPNE4-213ENST00000515418 ASXL1Q8IXJ9 1541 aa12.6□□□□□ -0.39
CPNE4-213ENST00000515418 ADAMTSL3P82987 1691 aa12.59□□□□□ -0.39
CPNE4-213ENST00000515418 PTPRMP28827 1452 aa12.58□□□□□ -0.39
CPNE4-213ENST00000515418 CCER2I3L3R5 266 aa12.58□□□□□ -0.4
CPNE4-213ENST00000515418 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
CPNE4-213ENST00000515418 YTHDC2Q9H6S0 1430 aaKnown RBP12.58□□□□□ -0.4
CPNE4-213ENST00000515418 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-213ENST00000515418 THEMISQ8N1K5 641 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-213ENST00000515418 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
CPNE4-213ENST00000515418 METP08581 1390 aa12.57□□□□□ -0.4
CPNE4-213ENST00000515418 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
CPNE4-213ENST00000515418 KDM5AP29375 1690 aaKnown RBP12.57□□□□□ -0.4
CPNE4-213ENST00000515418 WAPLQ7Z5K2 1190 aa12.56□□□□□ -0.4
CPNE4-213ENST00000515418 SLC26A8Q96RN1 970 aa12.56□□□□□ -0.4
CPNE4-213ENST00000515418 POGKQ9P215 609 aa12.56□□□□□ -0.4
CPNE4-213ENST00000515418 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
CPNE4-213ENST00000515418 NRXN3Q9Y4C0 1643 aa12.56□□□□□ -0.4
CPNE4-213ENST00000515418 QRICH2Q9H0J4 1663 aa12.56□□□□□ -0.4
CPNE4-213ENST00000515418 ARHGEF28Q8N1W1 1705 aaKnown RBP12.56□□□□□ -0.4
CPNE4-213ENST00000515418 MINK1Q8N4C8 1332 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-213ENST00000515418 MYO3AQ8NEV4 1616 aa12.55□□□□□ -0.4
CPNE4-213ENST00000515418 SETD1BQ9UPS6 1966 aaKnown RBP12.54□□□□□ -0.4
CPNE4-213ENST00000515418 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
CPNE4-213ENST00000515418 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
CPNE4-213ENST00000515418 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
CPNE4-213ENST00000515418 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
CPNE4-213ENST00000515418 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
CPNE4-213ENST00000515418 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
CPNE4-213ENST00000515418 SLC12A5Q9H2X9 1139 aa12.52□□□□□ -0.4
CPNE4-213ENST00000515418 PLEKHH1Q9ULM0 1364 aa12.52□□□□□ -0.4
CPNE4-213ENST00000515418 EVC2Q86UK5 1308 aa12.52□□□□□ -0.41
CPNE4-213ENST00000515418 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.41
CPNE4-213ENST00000515418 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.41
CPNE4-213ENST00000515418 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
CPNE4-213ENST00000515418 SLIT1O75093 1534 aa12.51□□□□□ -0.41
CPNE4-213ENST00000515418 ARHGAP23Q9P227 1491 aa12.51□□□□□ -0.41
CPNE4-213ENST00000515418 CEP170BQ9Y4F5 1589 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-213ENST00000515418 ABCC11Q96J66 1382 aa12.51□□□□□ -0.41
CPNE4-213ENST00000515418 CARD14Q9BXL6 1004 aa12.5□□□□□ -0.41
CPNE4-213ENST00000515418 MYOM1P52179 1685 aa12.5□□□□□ -0.41
CPNE4-213ENST00000515418 SRPK2P78362 688 aaKnown RBP12.5□□□□□ -0.41
CPNE4-213ENST00000515418 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
CPNE4-213ENST00000515418 KNSTRNQ9Y448 316 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms