RNA–Protein interactions for RNA: ENST00000515149.2

ATR-208, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-208ENST00000515149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.79□□□□□ -0.84
ATR-208ENST00000515149 MTRQ99707 1265 aa9.79□□□□□ -0.84
ATR-208ENST00000515149 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
ATR-208ENST00000515149 SLC10A3P09131 477 aa9.77□□□□□ -0.85
ATR-208ENST00000515149 NLRP7Q8WX94 980 aa9.77□□□□□ -0.85
ATR-208ENST00000515149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATR-208ENST00000515149 ZNF516Q92618 1163 aa9.76□□□□□ -0.85
ATR-208ENST00000515149 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
ATR-208ENST00000515149 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
ATR-208ENST00000515149 IL21Q9HBE4 155 aa9.74□□□□□ -0.85
ATR-208ENST00000515149 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
ATR-208ENST00000515149 COPS2P61201 443 aa9.73□□□□□ -0.85
ATR-208ENST00000515149 CFHP08603 1231 aa9.71□□□□□ -0.86
ATR-208ENST00000515149 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.86
ATR-208ENST00000515149 MAP2K5Q13163 448 aa9.7□□□□□ -0.86
ATR-208ENST00000515149 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
ATR-208ENST00000515149 RGS20O76081 388 aa9.69□□□□□ -0.86
ATR-208ENST00000515149 LMOD2Q6P5Q4 547 aa9.69□□□□□ -0.86
ATR-208ENST00000515149 BLOC1S3Q6QNY0 202 aa9.69□□□□□ -0.86
ATR-208ENST00000515149 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
ATR-208ENST00000515149 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
ATR-208ENST00000515149 IRF6O14896 467 aa9.68□□□□□ -0.86
ATR-208ENST00000515149 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
ATR-208ENST00000515149 ZPR1O75312 459 aa9.66□□□□□ -0.86
ATR-208ENST00000515149 KMT5BQ4FZB7 885 aa9.66□□□□□ -0.86
ATR-208ENST00000515149 MINK1Q8N4C8 1332 aaPredicted RBP9.65□□□□□ -0.86
ATR-208ENST00000515149 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.86
ATR-208ENST00000515149 PPP1R18Q6NYC8 613 aa9.65□□□□□ -0.86
ATR-208ENST00000515149 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
ATR-208ENST00000515149 RDH13Q8NBN7 331 aa9.63□□□□□ -0.87
ATR-208ENST00000515149 TLL1O43897 1013 aa9.62□□□□□ -0.87
ATR-208ENST00000515149 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
ATR-208ENST00000515149 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
ATR-208ENST00000515149 ZMYND10O75800 440 aa9.6□□□□□ -0.87
ATR-208ENST00000515149 GCGRP47871 477 aa9.6□□□□□ -0.87
ATR-208ENST00000515149 RSPH4AQ5TD94 716 aa9.6□□□□□ -0.87
ATR-208ENST00000515149 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.6□□□□□ -0.87
ATR-208ENST00000515149 MDM2Q00987 491 aaPredicted RBP9.59□□□□□ -0.87
ATR-208ENST00000515149 FUT2Q10981 343 aa9.58□□□□□ -0.88
ATR-208ENST00000515149 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
ATR-208ENST00000515149 SULF1Q8IWU6 871 aa9.58□□□□□ -0.88
ATR-208ENST00000515149 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
ATR-208ENST00000515149 MORN1Q5T089 497 aa9.57□□□□□ -0.88
ATR-208ENST00000515149 NR1I2O75469 434 aa9.56□□□□□ -0.88
ATR-208ENST00000515149 CD46P15529 392 aa9.56□□□□□ -0.88
ATR-208ENST00000515149 TMUB1Q9BVT8 246 aa9.56□□□□□ -0.88
ATR-208ENST00000515149 REPIN1Q9BWE0 567 aaKnown RBP9.55□□□□□ -0.88
ATR-208ENST00000515149 RNF223E7ERA6 249 aa9.54□□□□□ -0.88
ATR-208ENST00000515149 PRKD2Q9BZL6 878 aa9.54□□□□□ -0.88
ATR-208ENST00000515149 S1PR4O95977 384 aa9.53□□□□□ -0.88
ATR-208ENST00000515149 ADH1BP00325 375 aa9.53□□□□□ -0.88
ATR-208ENST00000515149 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
ATR-208ENST00000515149 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
ATR-208ENST00000515149 EMID1Q96A84 441 aaPredicted RBP9.53□□□□□ -0.88
ATR-208ENST00000515149 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
ATR-208ENST00000515149 SLC27A5Q9Y2P5 690 aa9.53□□□□□ -0.88
ATR-208ENST00000515149 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
ATR-208ENST00000515149 GGCXP38435 758 aa9.52□□□□□ -0.89
ATR-208ENST00000515149 THAP11Q96EK4 314 aa9.52□□□□□ -0.89
ATR-208ENST00000515149 GPCPD1Q9NPB8 672 aa9.52□□□□□ -0.89
ATR-208ENST00000515149 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
ATR-208ENST00000515149 CLCN1P35523 988 aa9.5□□□□□ -0.89
ATR-208ENST00000515149 SPSB2Q99619 263 aa9.5□□□□□ -0.89
ATR-208ENST00000515149 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
ATR-208ENST00000515149 FAM160A2Q8N612 972 aaPredicted RBP9.48□□□□□ -0.89
ATR-208ENST00000515149 HLA-CQ95604 372 aa9.48□□□□□ -0.89
ATR-208ENST00000515149 SLC6A16Q9GZN6 736 aa9.48□□□□□ -0.89
ATR-208ENST00000515149 KDM4AO75164 1064 aa9.47□□□□□ -0.89
ATR-208ENST00000515149 AMHR2Q16671 573 aa9.47□□□□□ -0.89
ATR-208ENST00000515149 BRICD5Q6PL45 260 aa9.47□□□□□ -0.89
ATR-208ENST00000515149 RNF19BQ6ZMZ0 732 aa9.47□□□□□ -0.89
ATR-208ENST00000515149 SLC24A1O60721 1099 aa9.46□□□□□ -0.9
ATR-208ENST00000515149 PLA2G2CQ5R387 149 aa9.46□□□□□ -0.9
ATR-208ENST00000515149 ANKLE1Q8NAG6 615 aa9.46□□□□□ -0.9
ATR-208ENST00000515149 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
ATR-208ENST00000515149 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
ATR-208ENST00000515149 SSTR3P32745 418 aaPredicted RBP9.44□□□□□ -0.9
ATR-208ENST00000515149 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
ATR-208ENST00000515149 PRDM9Q9NQV7 894 aa9.44□□□□□ -0.9
ATR-208ENST00000515149 TRIM66O15016 1216 aa9.43□□□□□ -0.9
ATR-208ENST00000515149 HOXA2O43364 376 aa9.43□□□□□ -0.9
ATR-208ENST00000515149 SLC19A1P41440 591 aa9.43□□□□□ -0.9
ATR-208ENST00000515149 GRIPAP1Q4V328 841 aa9.43□□□□□ -0.9
ATR-208ENST00000515149 USP46P62068 366 aa9.42□□□□□ -0.9
ATR-208ENST00000515149 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
ATR-208ENST00000515149 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
ATR-208ENST00000515149 GFRA3O60609 400 aa9.41□□□□□ -0.9
ATR-208ENST00000515149 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
ATR-208ENST00000515149 AK7Q96M32 723 aa9.41□□□□□ -0.9
ATR-208ENST00000515149 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
ATR-208ENST00000515149 TRIM67Q6ZTA4 783 aa9.4□□□□□ -0.9
ATR-208ENST00000515149 PARP9Q8IXQ6 854 aa9.4□□□□□ -0.9
ATR-208ENST00000515149 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
ATR-208ENST00000515149 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
ATR-208ENST00000515149 Q3C1V9 767 aa9.38□□□□□ -0.91
ATR-208ENST00000515149 NUTM1Q86Y26 1132 aa9.38□□□□□ -0.91
ATR-208ENST00000515149 SPIRE2Q8WWL2 714 aa9.38□□□□□ -0.91
ATR-208ENST00000515149 FCF1Q9Y324 198 aaKnown RBP9.38□□□□□ -0.91
ATR-208ENST00000515149 LCE2BO14633 110 aa9.37□□□□□ -0.91
ATR-208ENST00000515149 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms