RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
PRDM5-212ENST00000515109 UGGT1Q9NYU2 1555 aa23.26■■□□□ 1.31
PRDM5-212ENST00000515109 RCAN3Q9UKA8 241 aa23.26■■□□□ 1.31
PRDM5-212ENST00000515109 EFCAB6Q5THR3 1501 aa23.25■■□□□ 1.31
PRDM5-212ENST00000515109 MYOM1P52179 1685 aa23.25■■□□□ 1.31
PRDM5-212ENST00000515109 EIF3AQ14152 1382 aaKnown RBP23.25■■□□□ 1.31
PRDM5-212ENST00000515109 MAP3K4Q9Y6R4 1608 aa23.25■■□□□ 1.31
PRDM5-212ENST00000515109 KNSTRNQ9Y448 316 aa23.25■■□□□ 1.31
PRDM5-212ENST00000515109 ABCA6Q8N139 1617 aa23.24■■□□□ 1.31
PRDM5-212ENST00000515109 KDM5AP29375 1690 aaKnown RBP23.23■■□□□ 1.31
PRDM5-212ENST00000515109 PPRC1Q5VV67 1664 aaKnown RBP23.23■■□□□ 1.31
PRDM5-212ENST00000515109 IFT172Q9UG01 1749 aa23.23■■□□□ 1.31
PRDM5-212ENST00000515109 MYOM2P54296 1465 aa23.22■■□□□ 1.31
PRDM5-212ENST00000515109 MROH2AA6NES4 1674 aa23.21■■□□□ 1.31
PRDM5-212ENST00000515109 ZNF518AQ6AHZ1 1483 aa23.21■■□□□ 1.31
PRDM5-212ENST00000515109 CDCA7LQ96GN5 454 aa23.2■■□□□ 1.3
PRDM5-212ENST00000515109 ASXL1Q8IXJ9 1541 aa23.19■■□□□ 1.3
PRDM5-212ENST00000515109 AMER1Q5JTC6 1135 aaPredicted RBP23.19■■□□□ 1.3
PRDM5-212ENST00000515109 PPP2R1AP30153 589 aa23.18■■□□□ 1.3
PRDM5-212ENST00000515109 LMTK2Q8IWU2 1503 aa23.17■■□□□ 1.3
PRDM5-212ENST00000515109 CFAP74Q9C0B2 1584 aa23.17■■□□□ 1.3
PRDM5-212ENST00000515109 CFAP70Q5T0N1 1121 aa23.16■■□□□ 1.3
PRDM5-212ENST00000515109 ADGRF5Q8IZF2 1346 aa23.15■■□□□ 1.3
PRDM5-212ENST00000515109 EXOC6Q8TAG9 804 aa23.15■■□□□ 1.3
PRDM5-212ENST00000515109 ADAMTS8Q9UP79 889 aa23.15■■□□□ 1.3
PRDM5-212ENST00000515109 NPM1P06748 294 aaKnown RBP eCLIP23.14■■□□□ 1.29
PRDM5-212ENST00000515109 WDR43Q15061 677 aaKnown RBP eCLIP23.12■■□□□ 1.29
PRDM5-212ENST00000515109 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
PRDM5-212ENST00000515109 CFAP65Q6ZU64 1925 aaKnown RBP23.11■■□□□ 1.29
PRDM5-212ENST00000515109 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
PRDM5-212ENST00000515109 ADGRB3O60242 1522 aa23.11■■□□□ 1.29
PRDM5-212ENST00000515109 PIK3C2GO75747 1445 aa23.11■■□□□ 1.29
PRDM5-212ENST00000515109 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
PRDM5-212ENST00000515109 POGZQ7Z3K3 1410 aa23.1■■□□□ 1.29
PRDM5-212ENST00000515109 NRXN1Q9ULB1 1477 aa23.1■■□□□ 1.29
PRDM5-212ENST00000515109 CD109Q6YHK3 1445 aa23.1■■□□□ 1.29
PRDM5-212ENST00000515109 MYO3AQ8NEV4 1616 aa23.09■■□□□ 1.29
PRDM5-212ENST00000515109 SLC24A1O60721 1099 aa23.09■■□□□ 1.29
PRDM5-212ENST00000515109 HECW2Q9P2P5 1572 aa23.09■■□□□ 1.29
PRDM5-212ENST00000515109 FRMPD1Q5SYB0 1578 aa23.08■■□□□ 1.29
PRDM5-212ENST00000515109 NOS1P29475 1434 aa23.07■■□□□ 1.28
PRDM5-212ENST00000515109 MLH3Q9UHC1 1453 aa23.06■■□□□ 1.28
PRDM5-212ENST00000515109 PPLO60437 1756 aa23.06■■□□□ 1.28
PRDM5-212ENST00000515109 CHGAP10645 457 aaKnown RBP23.05■■□□□ 1.28
PRDM5-212ENST00000515109 SETBP1Q9Y6X0 1596 aa23.05■■□□□ 1.28
PRDM5-212ENST00000515109 NPATQ14207 1427 aa23.05■■□□□ 1.28
PRDM5-212ENST00000515109 PLEKHH1Q9ULM0 1364 aa23.04■■□□□ 1.28
PRDM5-212ENST00000515109 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
PRDM5-212ENST00000515109 PLIN1O60240 522 aa23.03■■□□□ 1.28
PRDM5-212ENST00000515109 GGT6Q6P531 493 aa23.02■■□□□ 1.28
PRDM5-212ENST00000515109 SBNO2Q9Y2G9 1366 aa23.01■■□□□ 1.27
PRDM5-212ENST00000515109 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
PRDM5-212ENST00000515109 ABCC3O15438 1527 aa22.99■■□□□ 1.27
PRDM5-212ENST00000515109 QRICH2Q9H0J4 1663 aa22.99■■□□□ 1.27
PRDM5-212ENST00000515109 CENPJQ9HC77 1338 aaPredicted RBP22.98■■□□□ 1.27
PRDM5-212ENST00000515109 ZNF521Q96K83 1311 aa22.98■■□□□ 1.27
PRDM5-212ENST00000515109 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
PRDM5-212ENST00000515109 CAMSAP1Q5T5Y3 1602 aa22.98■■□□□ 1.27
PRDM5-212ENST00000515109 CRBNQ96SW2 442 aa22.97■■□□□ 1.27
PRDM5-212ENST00000515109 DUSP27Q5VZP5 1158 aa22.96■■□□□ 1.27
PRDM5-212ENST00000515109 GOLGA2Q08379 1002 aa22.96■■□□□ 1.27
PRDM5-212ENST00000515109 CCDC146Q8IYE0 955 aa22.94■■□□□ 1.26
PRDM5-212ENST00000515109 SIGLEC1Q9BZZ2 1709 aa22.94■■□□□ 1.26
PRDM5-212ENST00000515109 TCERG1O14776 1098 aaKnown RBP22.94■■□□□ 1.26
PRDM5-212ENST00000515109 TRAK1Q9UPV9 953 aa22.94■■□□□ 1.26
PRDM5-212ENST00000515109 ADGRB1O14514 1584 aa22.94■■□□□ 1.26
PRDM5-212ENST00000515109 C14orf93Q9H972 538 aaKnown RBP22.93■■□□□ 1.26
PRDM5-212ENST00000515109 ANP32AP39687 249 aaKnown RBP22.93■■□□□ 1.26
PRDM5-212ENST00000515109 NEO1Q92859 1461 aa22.92■■□□□ 1.26
PRDM5-212ENST00000515109 NOP58Q9Y2X3 529 aaKnown RBP22.92■■□□□ 1.26
PRDM5-212ENST00000515109 RPGRIP1LQ68CZ1 1315 aa22.91■■□□□ 1.26
PRDM5-212ENST00000515109 DIP2CQ9Y2E4 1556 aa22.9■■□□□ 1.26
PRDM5-212ENST00000515109 C20orf194Q5TEA3 1177 aa22.89■■□□□ 1.26
PRDM5-212ENST00000515109 PIK3C2BO00750 1634 aa22.89■■□□□ 1.26
PRDM5-212ENST00000515109 RAPGEF3O95398 923 aa22.89■■□□□ 1.25
PRDM5-212ENST00000515109 SLFN5Q08AF3 891 aa22.89■■□□□ 1.25
PRDM5-212ENST00000515109 NSD3Q9BZ95 1437 aa22.89■■□□□ 1.25
PRDM5-212ENST00000515109 APAF1O14727 1248 aa22.88■■□□□ 1.25
PRDM5-212ENST00000515109 TMEM132EQ6IEE7 984 aa22.88■■□□□ 1.25
PRDM5-212ENST00000515109 GLI2P10070 1586 aa22.87■■□□□ 1.25
PRDM5-212ENST00000515109 RICTORQ6R327 1708 aa22.85■■□□□ 1.25
PRDM5-212ENST00000515109 IPO9Q96P70 1041 aaKnown RBP22.85■■□□□ 1.25
PRDM5-212ENST00000515109 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
PRDM5-212ENST00000515109 MS4A1P11836 297 aa22.84■■□□□ 1.25
PRDM5-212ENST00000515109 NEXMIFQ5QGS0 1516 aa22.84■■□□□ 1.25
PRDM5-212ENST00000515109 ARHGEF28Q8N1W1 1705 aaKnown RBP22.84■■□□□ 1.25
PRDM5-212ENST00000515109 TRMT2AQ8IZ69 625 aaKnown RBP22.84■■□□□ 1.25
PRDM5-212ENST00000515109 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.84■■□□□ 1.25
PRDM5-212ENST00000515109 SLC12A5Q9H2X9 1139 aa22.83■■□□□ 1.25
PRDM5-212ENST00000515109 PAK3O75914 559 aaPredicted RBP22.83■■□□□ 1.24
PRDM5-212ENST00000515109 USP32Q8NFA0 1604 aa22.83■■□□□ 1.24
PRDM5-212ENST00000515109 SHPRHQ149N8 1683 aa22.82■■□□□ 1.24
PRDM5-212ENST00000515109 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
PRDM5-212ENST00000515109 PDE4AP27815 886 aa22.82■■□□□ 1.24
PRDM5-212ENST00000515109 MORC1Q86VD1 984 aa22.82■■□□□ 1.24
PRDM5-212ENST00000515109 NUTM2DQ5VT03 806 aaPredicted RBP22.81■■□□□ 1.24
PRDM5-212ENST00000515109 SPINK5Q9NQ38 1064 aaPredicted RBP22.81■■□□□ 1.24
PRDM5-212ENST00000515109 NGEFQ8N5V2 710 aa22.8■■□□□ 1.24
PRDM5-212ENST00000515109 E9PSI1 815 aa22.79■■□□□ 1.24
PRDM5-212ENST00000515109 VGFO15240 615 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms