RNA–Protein interactions for RNA: ENST00000514999.5

CPNE4-212, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-212ENST00000514999 CUL7Q14999 1698 aa9.34□□□□□ -0.91
CPNE4-212ENST00000514999 PLB1Q6P1J6 1458 aa9.34□□□□□ -0.91
CPNE4-212ENST00000514999 PPRC1Q5VV67 1664 aaKnown RBP9.33□□□□□ -0.92
CPNE4-212ENST00000514999 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
CPNE4-212ENST00000514999 ABCC2Q92887 1545 aa9.33□□□□□ -0.92
CPNE4-212ENST00000514999 TBC1D12O60347 775 aa9.33□□□□□ -0.92
CPNE4-212ENST00000514999 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
CPNE4-212ENST00000514999 PPP1R15AO75807 674 aaPredicted RBP9.32□□□□□ -0.92
CPNE4-212ENST00000514999 FBXO41Q8TF61 875 aa9.32□□□□□ -0.92
CPNE4-212ENST00000514999 GLI2P10070 1586 aa9.32□□□□□ -0.92
CPNE4-212ENST00000514999 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
CPNE4-212ENST00000514999 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
CPNE4-212ENST00000514999 TEX14Q8IWB6 1497 aa9.3□□□□□ -0.92
CPNE4-212ENST00000514999 COL17A1Q9UMD9 1497 aaPredicted RBP9.3□□□□□ -0.92
CPNE4-212ENST00000514999 RAPGEF2Q9Y4G8 1499 aa9.3□□□□□ -0.92
CPNE4-212ENST00000514999 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
CPNE4-212ENST00000514999 IGF1RP08069 1367 aa9.29□□□□□ -0.92
CPNE4-212ENST00000514999 DDX10Q13206 875 aaKnown RBP9.29□□□□□ -0.92
CPNE4-212ENST00000514999 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
CPNE4-212ENST00000514999 KIF27Q86VH2 1401 aa9.29□□□□□ -0.92
CPNE4-212ENST00000514999 ITGAEP38570 1179 aa9.28□□□□□ -0.92
CPNE4-212ENST00000514999 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
CPNE4-212ENST00000514999 UACAQ9BZF9 1416 aa9.28□□□□□ -0.92
CPNE4-212ENST00000514999 MAP3K4Q9Y6R4 1608 aa9.27□□□□□ -0.92
CPNE4-212ENST00000514999 RAB3GAP2Q9H2M9 1393 aa9.27□□□□□ -0.93
CPNE4-212ENST00000514999 EPRSP07814 1512 aaKnown RBP9.27□□□□□ -0.93
CPNE4-212ENST00000514999 ANP32AP39687 249 aaKnown RBP9.27□□□□□ -0.93
CPNE4-212ENST00000514999 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
CPNE4-212ENST00000514999 KCNH8Q96L42 1107 aa9.26□□□□□ -0.93
CPNE4-212ENST00000514999 VPS9D1Q9Y2B5 631 aa9.26□□□□□ -0.93
CPNE4-212ENST00000514999 CARMIL1Q5VZK9 1371 aa9.25□□□□□ -0.93
CPNE4-212ENST00000514999 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
CPNE4-212ENST00000514999 UHRF1BP1LA0JNW5 1464 aa9.25□□□□□ -0.93
CPNE4-212ENST00000514999 PRXQ9BXM0 1461 aa9.25□□□□□ -0.93
CPNE4-212ENST00000514999 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
CPNE4-212ENST00000514999 ZCCHC11Q5TAX3 1644 aaKnown RBP9.24□□□□□ -0.93
CPNE4-212ENST00000514999 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
CPNE4-212ENST00000514999 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
CPNE4-212ENST00000514999 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-212ENST00000514999 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
CPNE4-212ENST00000514999 CRISPLD2Q9H0B8 497 aa9.23□□□□□ -0.93
CPNE4-212ENST00000514999 USP35Q9P2H5 1018 aa9.23□□□□□ -0.93
CPNE4-212ENST00000514999 KDM5BQ9UGL1 1544 aa9.22□□□□□ -0.93
CPNE4-212ENST00000514999 ZNF454Q8N9F8 522 aa9.22□□□□□ -0.93
CPNE4-212ENST00000514999 BCL2L12Q9HB09 334 aa9.22□□□□□ -0.93
CPNE4-212ENST00000514999 CD109Q6YHK3 1445 aa9.22□□□□□ -0.93
CPNE4-212ENST00000514999 HNRNPUQ00839 825 aaKnown RBP eCLIP9.21□□□□□ -0.94
CPNE4-212ENST00000514999 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
CPNE4-212ENST00000514999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.21□□□□□ -0.94
CPNE4-212ENST00000514999 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
CPNE4-212ENST00000514999 FOSBP53539 338 aa9.2□□□□□ -0.94
CPNE4-212ENST00000514999 TONSLQ96HA7 1378 aa9.2□□□□□ -0.94
CPNE4-212ENST00000514999 WDR7Q9Y4E6 1490 aa9.2□□□□□ -0.94
CPNE4-212ENST00000514999 DISP1Q96F81 1524 aa9.2□□□□□ -0.94
CPNE4-212ENST00000514999 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
CPNE4-212ENST00000514999 KANK4Q5T7N3 995 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-212ENST00000514999 IPO9Q96P70 1041 aaKnown RBP9.19□□□□□ -0.94
CPNE4-212ENST00000514999 PTPN5P54829 565 aa9.18□□□□□ -0.94
CPNE4-212ENST00000514999 ARID4BQ4LE39 1312 aaPredicted RBP9.18□□□□□ -0.94
CPNE4-212ENST00000514999 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
CPNE4-212ENST00000514999 LMTK3Q96Q04 1460 aa9.18□□□□□ -0.94
CPNE4-212ENST00000514999 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
CPNE4-212ENST00000514999 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
CPNE4-212ENST00000514999 CFAP43Q8NDM7 1665 aa9.17□□□□□ -0.94
CPNE4-212ENST00000514999 TIAM1Q13009 1591 aa9.17□□□□□ -0.94
CPNE4-212ENST00000514999 ARID3CA6NKF2 412 aa9.17□□□□□ -0.94
CPNE4-212ENST00000514999 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
CPNE4-212ENST00000514999 NCKAP5LQ9HCH0 1330 aa9.16□□□□□ -0.94
CPNE4-212ENST00000514999 PTPREP23469 700 aa9.16□□□□□ -0.94
CPNE4-212ENST00000514999 ZBED2Q9BTP6 218 aa9.16□□□□□ -0.94
CPNE4-212ENST00000514999 KIAA0556O60303 1618 aa9.16□□□□□ -0.94
CPNE4-212ENST00000514999 MAGI3Q5TCQ9 1506 aa9.15□□□□□ -0.94
CPNE4-212ENST00000514999 PTPRMP28827 1452 aa9.15□□□□□ -0.94
CPNE4-212ENST00000514999 ZBED9Q6R2W3 1325 aa9.15□□□□□ -0.94
CPNE4-212ENST00000514999 C11orf95C9JLR9 678 aaPredicted RBP9.15□□□□□ -0.94
CPNE4-212ENST00000514999 PPM1GO15355 546 aaPredicted RBP9.15□□□□□ -0.94
CPNE4-212ENST00000514999 NBR1Q14596 966 aa9.15□□□□□ -0.94
CPNE4-212ENST00000514999 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
CPNE4-212ENST00000514999 PDE4AP27815 886 aa9.14□□□□□ -0.95
CPNE4-212ENST00000514999 UGGT2Q9NYU1 1516 aa9.14□□□□□ -0.95
CPNE4-212ENST00000514999 RGS20O76081 388 aa9.13□□□□□ -0.95
CPNE4-212ENST00000514999 LRRC9Q6ZRR7 1453 aa9.13□□□□□ -0.95
CPNE4-212ENST00000514999 ARHGAP35Q9NRY4 1499 aa9.13□□□□□ -0.95
CPNE4-212ENST00000514999 EVI5O60447 810 aa9.12□□□□□ -0.95
CPNE4-212ENST00000514999 WASHC2AQ641Q2 1341 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 NCOA2Q15596 1464 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 HSPA2P54652 639 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
CPNE4-212ENST00000514999 ZDHHC16Q969W1 377 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 CCDC136Q96JN2 1154 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 CNTLNQ9NXG0 1405 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 DISP3Q9P2K9 1392 aa9.11□□□□□ -0.95
CPNE4-212ENST00000514999 ADAMTSL3P82987 1691 aa9.1□□□□□ -0.95
CPNE4-212ENST00000514999 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
CPNE4-212ENST00000514999 CERKQ8TCT0 537 aa9.1□□□□□ -0.95
CPNE4-212ENST00000514999 WNT2BQ93097 391 aa9.1□□□□□ -0.95
CPNE4-212ENST00000514999 SMG6Q86US8 1419 aaKnown RBP9.1□□□□□ -0.95
CPNE4-212ENST00000514999 PCF11O94913 1555 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms