RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 KHSRPQ92945 711 aaKnown RBP eCLIP13.78□□□□□ -0.2
LDHBP3-201ENST00000514909 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
LDHBP3-201ENST00000514909 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
LDHBP3-201ENST00000514909 RFC5P40937 340 aa13.77□□□□□ -0.21
LDHBP3-201ENST00000514909 TUSC1Q2TAM9 212 aa13.77□□□□□ -0.21
LDHBP3-201ENST00000514909 TMEM259Q4ZIN3 620 aa13.77□□□□□ -0.21
LDHBP3-201ENST00000514909 RBM46Q8TBY0 533 aaKnown RBP13.77□□□□□ -0.21
LDHBP3-201ENST00000514909 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
LDHBP3-201ENST00000514909 ATP1B4Q9UN42 357 aaPredicted RBP13.77□□□□□ -0.21
LDHBP3-201ENST00000514909 COG6Q9Y2V7 657 aa13.77□□□□□ -0.21
LDHBP3-201ENST00000514909 CCDC97Q96F63 343 aaPredicted RBP13.76□□□□□ -0.21
LDHBP3-201ENST00000514909 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
LDHBP3-201ENST00000514909 SOCS7O14512 581 aa13.75□□□□□ -0.21
LDHBP3-201ENST00000514909 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
LDHBP3-201ENST00000514909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.74□□□□□ -0.21
LDHBP3-201ENST00000514909 PRSS12P56730 875 aa13.74□□□□□ -0.21
LDHBP3-201ENST00000514909 ZNF454Q8N9F8 522 aa13.71□□□□□ -0.21
LDHBP3-201ENST00000514909 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
LDHBP3-201ENST00000514909 SNRKQ9NRH2 765 aa13.7□□□□□ -0.22
LDHBP3-201ENST00000514909 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
LDHBP3-201ENST00000514909 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
LDHBP3-201ENST00000514909 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
LDHBP3-201ENST00000514909 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
LDHBP3-201ENST00000514909 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
LDHBP3-201ENST00000514909 ADAM33Q9BZ11 813 aa13.68□□□□□ -0.22
LDHBP3-201ENST00000514909 SPTLC1O15269 473 aa13.67□□□□□ -0.22
LDHBP3-201ENST00000514909 CD46P15529 392 aa13.67□□□□□ -0.22
LDHBP3-201ENST00000514909 GJA5P36382 358 aa13.67□□□□□ -0.22
LDHBP3-201ENST00000514909 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
LDHBP3-201ENST00000514909 FBXO31Q5XUX0 539 aaPredicted RBP13.65□□□□□ -0.22
LDHBP3-201ENST00000514909 SULF1Q8IWU6 871 aa13.65□□□□□ -0.22
LDHBP3-201ENST00000514909 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
LDHBP3-201ENST00000514909 NECTIN2Q92692 538 aa13.64□□□□□ -0.23
LDHBP3-201ENST00000514909 EYA1Q99502 592 aa13.64□□□□□ -0.23
LDHBP3-201ENST00000514909 RCCD1A6NED2 376 aa13.63□□□□□ -0.23
LDHBP3-201ENST00000514909 NUDT7P0C024 238 aa13.63□□□□□ -0.23
LDHBP3-201ENST00000514909 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
LDHBP3-201ENST00000514909 MTMR14Q8NCE2 650 aa13.63□□□□□ -0.23
LDHBP3-201ENST00000514909 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
LDHBP3-201ENST00000514909 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
LDHBP3-201ENST00000514909 KCTD17Q8N5Z5 321 aa13.61□□□□□ -0.23
LDHBP3-201ENST00000514909 PRM3Q9NNZ6 103 aa13.6□□□□□ -0.23
LDHBP3-201ENST00000514909 POTEEQ6S8J3 1075 aa13.59□□□□□ -0.23
LDHBP3-201ENST00000514909 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
LDHBP3-201ENST00000514909 LSM11P83369 360 aaKnown RBP eCLIP13.58□□□□□ -0.24
LDHBP3-201ENST00000514909 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
LDHBP3-201ENST00000514909 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
LDHBP3-201ENST00000514909 NUTM1Q86Y26 1132 aa13.58□□□□□ -0.24
LDHBP3-201ENST00000514909 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
LDHBP3-201ENST00000514909 DNAJB2P25686 324 aa13.57□□□□□ -0.24
LDHBP3-201ENST00000514909 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
LDHBP3-201ENST00000514909 LILRB3O75022 631 aa13.56□□□□□ -0.24
LDHBP3-201ENST00000514909 PPP1R15AO75807 674 aaPredicted RBP13.56□□□□□ -0.24
LDHBP3-201ENST00000514909 GDPD2Q9HCC8 539 aa13.56□□□□□ -0.24
LDHBP3-201ENST00000514909 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
LDHBP3-201ENST00000514909 NBPF26B4DH59 902 aa13.54□□□□□ -0.24
LDHBP3-201ENST00000514909 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
LDHBP3-201ENST00000514909 TMEM134Q9H6X4 195 aa13.54□□□□□ -0.24
LDHBP3-201ENST00000514909 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
LDHBP3-201ENST00000514909 COL9A1P20849 921 aa13.53□□□□□ -0.24
LDHBP3-201ENST00000514909 PPP4R3BQ5MIZ7 849 aa13.53□□□□□ -0.24
LDHBP3-201ENST00000514909 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
LDHBP3-201ENST00000514909 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
LDHBP3-201ENST00000514909 DDX11L8A8MPP1 907 aa13.51□□□□□ -0.25
LDHBP3-201ENST00000514909 PBX2P40425 430 aa13.51□□□□□ -0.25
LDHBP3-201ENST00000514909 QPCTQ16769 361 aa13.5□□□□□ -0.25
LDHBP3-201ENST00000514909 NUDT18Q6ZVK8 323 aa13.5□□□□□ -0.25
LDHBP3-201ENST00000514909 RETREG2Q8NC44 543 aa13.5□□□□□ -0.25
LDHBP3-201ENST00000514909 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
LDHBP3-201ENST00000514909 ABL2P42684 1182 aa13.48□□□□□ -0.25
LDHBP3-201ENST00000514909 CALR3Q96L12 384 aaKnown RBP13.48□□□□□ -0.25
LDHBP3-201ENST00000514909 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
LDHBP3-201ENST00000514909 AP1G2O75843 785 aa13.47□□□□□ -0.25
LDHBP3-201ENST00000514909 USP17L8P0C7I0 530 aa13.47□□□□□ -0.25
LDHBP3-201ENST00000514909 PTPREP23469 700 aa13.47□□□□□ -0.25
LDHBP3-201ENST00000514909 USP46P62068 366 aa13.47□□□□□ -0.25
LDHBP3-201ENST00000514909 TATDN2Q93075 761 aa13.47□□□□□ -0.25
LDHBP3-201ENST00000514909 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
LDHBP3-201ENST00000514909 NDUFV2P19404 249 aa13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 PDE4CQ08493 712 aa13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 PACS2Q86VP3 889 aa13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 GLMNQ92990 594 aa13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 PNMA3Q9UL41 463 aa13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 PCDHB15Q9Y5E8 787 aa13.46□□□□□ -0.25
LDHBP3-201ENST00000514909 C3orf80F5H4A9 247 aa13.44□□□□□ -0.26
LDHBP3-201ENST00000514909 KDM4AO75164 1064 aa13.44□□□□□ -0.26
LDHBP3-201ENST00000514909 ZBTB3Q9H5J0 574 aa13.44□□□□□ -0.26
LDHBP3-201ENST00000514909 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
LDHBP3-201ENST00000514909 NUTM2BA6NNL0 878 aaPredicted RBP13.42□□□□□ -0.26
LDHBP3-201ENST00000514909 POM121CA8CG34 1229 aa13.42□□□□□ -0.26
LDHBP3-201ENST00000514909 NUTM2EB1AL46 878 aaPredicted RBP13.42□□□□□ -0.26
LDHBP3-201ENST00000514909 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
LDHBP3-201ENST00000514909 NUTM2AQ8IVF1 878 aaPredicted RBP13.42□□□□□ -0.26
LDHBP3-201ENST00000514909 GJD4Q96KN9 370 aaPredicted RBP13.42□□□□□ -0.26
LDHBP3-201ENST00000514909 HOXA2O43364 376 aa13.4□□□□□ -0.26
LDHBP3-201ENST00000514909 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
LDHBP3-201ENST00000514909 RDH13Q8NBN7 331 aa13.4□□□□□ -0.26
LDHBP3-201ENST00000514909 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms