RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 RGS3P49796 1198 aa9.92□□□□□ -0.82
PDLIM5-219ENST00000514743 PRAG1Q86YV5 1406 aa9.92□□□□□ -0.82
PDLIM5-219ENST00000514743 TEX2Q8IWB9 1127 aa9.92□□□□□ -0.82
PDLIM5-219ENST00000514743 FTSJ3Q8IY81 847 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 TRAPPC8Q9Y2L5 1435 aa9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 CEP152O94986 1710 aa9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 HNRNPUQ00839 825 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 INO80Q9ULG1 1556 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 ARID4BQ4LE39 1312 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 CNPY4Q8N129 248 aa9.91□□□□□ -0.82
PDLIM5-219ENST00000514743 PRDM15P57071 1507 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-219ENST00000514743 CCDC144AA2RUR9 1427 aa9.9□□□□□ -0.82
PDLIM5-219ENST00000514743 SPHKAPQ2M3C7 1700 aa9.9□□□□□ -0.82
PDLIM5-219ENST00000514743 HSP90AA1P07900 732 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-219ENST00000514743 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-219ENST00000514743 NEFMP07197 916 aa9.89□□□□□ -0.83
PDLIM5-219ENST00000514743 PRDM4Q9UKN5 801 aa9.88□□□□□ -0.83
PDLIM5-219ENST00000514743 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
PDLIM5-219ENST00000514743 CARD11Q9BXL7 1154 aa9.88□□□□□ -0.83
PDLIM5-219ENST00000514743 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
PDLIM5-219ENST00000514743 WDR7Q9Y4E6 1490 aa9.87□□□□□ -0.83
PDLIM5-219ENST00000514743 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-219ENST00000514743 MADDQ8WXG6 1647 aa9.87□□□□□ -0.83
PDLIM5-219ENST00000514743 VWDEQ8N2E2 1590 aa9.87□□□□□ -0.83
PDLIM5-219ENST00000514743 TET3O43151 1660 aa9.87□□□□□ -0.83
PDLIM5-219ENST00000514743 FAM43AQ8N2R8 423 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 PLCD3Q8N3E9 789 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 MRS2Q9HD23 443 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 IQGAP1P46940 1657 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 RTEL1-TNFRSF6BF6WH68 1400 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 MROH1Q8NDA8 1641 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 ROCK2O75116 1388 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 TRPM2O94759 1503 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 CALD1Q05682 793 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 CLTCL1P53675 1640 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 ST20-MTHFSA0A0A6YYL1 179 aa9.86□□□□□ -0.83
PDLIM5-219ENST00000514743 ATP7AQ04656 1500 aa9.85□□□□□ -0.83
PDLIM5-219ENST00000514743 WASHC2CQ9Y4E1 1318 aa9.85□□□□□ -0.83
PDLIM5-219ENST00000514743 NCLP19338 710 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-219ENST00000514743 MAPK8IP2Q13387 824 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-219ENST00000514743 EFCAB2Q5VUJ9 269 aa9.85□□□□□ -0.83
PDLIM5-219ENST00000514743 PRDM10Q9NQV6 1147 aa9.85□□□□□ -0.83
PDLIM5-219ENST00000514743 ZBED9Q6R2W3 1325 aa9.85□□□□□ -0.83
PDLIM5-219ENST00000514743 COL17A1Q9UMD9 1497 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-219ENST00000514743 FAM9BQ8IZU0 186 aa9.84□□□□□ -0.83
PDLIM5-219ENST00000514743 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
PDLIM5-219ENST00000514743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■□□□□ 11
PDLIM5-219ENST00000514743 KIDINS220Q9ULH0 1771 aa9.83□□□□□ -0.84
PDLIM5-219ENST00000514743 WWC1Q8IX03 1113 aa9.83□□□□□ -0.84
PDLIM5-219ENST00000514743 FANCAO15360 1455 aa9.83□□□□□ -0.84
PDLIM5-219ENST00000514743 SENP3-EIF4A1A0A087X0R7 540 aa9.83□□□□□ -0.84
PDLIM5-219ENST00000514743 IFT172Q9UG01 1749 aa9.82□□□□□ -0.84
PDLIM5-219ENST00000514743 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
PDLIM5-219ENST00000514743 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
PDLIM5-219ENST00000514743 PTPRTO14522 1441 aa9.82□□□□□ -0.84
PDLIM5-219ENST00000514743 CHRM1P11229 460 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-219ENST00000514743 NEURL4Q96JN8 1562 aa9.81□□□□□ -0.84
PDLIM5-219ENST00000514743 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
PDLIM5-219ENST00000514743 KIAA1210Q9ULL0 1709 aa9.8□□□□□ -0.84
PDLIM5-219ENST00000514743 RGL3Q3MIN7 710 aa9.8□□□□□ -0.84
PDLIM5-219ENST00000514743 MROH2AA6NES4 1674 aa9.8□□□□□ -0.84
PDLIM5-219ENST00000514743 SPAG9O60271 1321 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-219ENST00000514743 ADGRL1O94910 1474 aa9.8□□□□□ -0.84
PDLIM5-219ENST00000514743 ASXL2Q76L83 1435 aa9.8□□□□□ -0.84
PDLIM5-219ENST00000514743 DISP3Q9P2K9 1392 aa9.79□□□□□ -0.84
PDLIM5-219ENST00000514743 TESK2Q96S53 571 aa9.79□□□□□ -0.84
PDLIM5-219ENST00000514743 MYOM1P52179 1685 aa9.79□□□□□ -0.84
PDLIM5-219ENST00000514743 LRPPRCP42704 1394 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-219ENST00000514743 PPRC1Q5VV67 1664 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-219ENST00000514743 RNF216Q9NWF9 866 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-219ENST00000514743 CCDC9Q9Y3X0 531 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-219ENST00000514743 KTN1Q86UP2 1357 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-219ENST00000514743 KIF1BO60333 1816 aa9.78□□□□□ -0.84
PDLIM5-219ENST00000514743 PARD3Q8TEW0 1356 aa9.78□□□□□ -0.84
PDLIM5-219ENST00000514743 PPM1GO15355 546 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-219ENST00000514743 PNISRQ8TF01 805 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-219ENST00000514743 KCNG1Q9UIX4 513 aa9.77□□□□□ -0.84
PDLIM5-219ENST00000514743 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.85
PDLIM5-219ENST00000514743 SMG6Q86US8 1419 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-219ENST00000514743 UGGT1Q9NYU2 1555 aa9.77□□□□□ -0.85
PDLIM5-219ENST00000514743 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-219ENST00000514743 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 SCAPERQ9BY12 1400 aa9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 ABCA6Q8N139 1617 aa9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 BRD4O60885 1362 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 FRMPD1Q5SYB0 1578 aa9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 CFAP74Q9C0B2 1584 aa9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 ZNF830Q96NB3 372 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 MAP3K4Q9Y6R4 1608 aa9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 MYBBP1AQ9BQG0 1328 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-219ENST00000514743 TMEM132AQ24JP5 1023 aa9.75□□□□□ -0.85
PDLIM5-219ENST00000514743 IGSF3O75054 1194 aa9.75□□□□□ -0.85
PDLIM5-219ENST00000514743 LMTK2Q8IWU2 1503 aa9.75□□□□□ -0.85
PDLIM5-219ENST00000514743 SYNMO15061 1565 aa9.74□□□□□ -0.85
PDLIM5-219ENST00000514743 RALBP1Q15311 655 aa9.74□□□□□ -0.85
PDLIM5-219ENST00000514743 VGLL3A8MV65 326 aa9.74□□□□□ -0.85
PDLIM5-219ENST00000514743 ZBTB47Q9UFB7 747 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-219ENST00000514743 ZNF518AQ6AHZ1 1483 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms