RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.29□□□□□ -0.12
MATR3-224ENST00000514488 PHF8Q9UPP1 1060 aa14.29□□□□□ -0.12
MATR3-224ENST00000514488 ZNF335Q9H4Z2 1342 aaPredicted RBP14.29□□□□□ -0.12
MATR3-224ENST00000514488 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
MATR3-224ENST00000514488 ABCC1P33527 1531 aa14.29□□□□□ -0.12
MATR3-224ENST00000514488 UBAP1LF5GYI3 381 aa14.28□□□□□ -0.12
MATR3-224ENST00000514488 C3orf67Q6ZVT6 689 aa14.28□□□□□ -0.12
MATR3-224ENST00000514488 PREX2Q70Z35 1606 aa14.28□□□□□ -0.12
MATR3-224ENST00000514488 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
MATR3-224ENST00000514488 NCKAP5LQ9HCH0 1330 aa14.28□□□□□ -0.12
MATR3-224ENST00000514488 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.13
MATR3-224ENST00000514488 BOLA1Q9Y3E2 137 aa14.27□□□□□ -0.13
MATR3-224ENST00000514488 MROH2AA6NES4 1674 aa14.26□□□□□ -0.13
MATR3-224ENST00000514488 CLIP1P30622 1438 aa14.26□□□□□ -0.13
MATR3-224ENST00000514488 FMN1Q68DA7 1419 aa14.26□□□□□ -0.13
MATR3-224ENST00000514488 G3V3G9 751 aa14.26□□□□□ -0.13
MATR3-224ENST00000514488 NLRP6P59044 892 aa14.26□□□□□ -0.13
MATR3-224ENST00000514488 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
MATR3-224ENST00000514488 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
MATR3-224ENST00000514488 HS6ST3Q8IZP7 471 aa14.25□□□□□ -0.13
MATR3-224ENST00000514488 CLTCQ00610 1675 aaKnown RBP14.25□□□□□ -0.13
MATR3-224ENST00000514488 MYO3AQ8NEV4 1616 aa14.25□□□□□ -0.13
MATR3-224ENST00000514488 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
MATR3-224ENST00000514488 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
MATR3-224ENST00000514488 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
MATR3-224ENST00000514488 FBXO22Q8NEZ5 403 aa14.23□□□□□ -0.13
MATR3-224ENST00000514488 MFRPQ9BY79 579 aa14.23□□□□□ -0.13
MATR3-224ENST00000514488 NPATQ14207 1427 aa14.22□□□□□ -0.13
MATR3-224ENST00000514488 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
MATR3-224ENST00000514488 TMEM121BQ9BXQ6 578 aaPredicted RBP14.21□□□□□ -0.13
MATR3-224ENST00000514488 ZMYM3Q14202 1370 aa14.21□□□□□ -0.14
MATR3-224ENST00000514488 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
MATR3-224ENST00000514488 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
MATR3-224ENST00000514488 CEP170BQ9Y4F5 1589 aaPredicted RBP14.2□□□□□ -0.14
MATR3-224ENST00000514488 CHGAP10645 457 aaKnown RBP14.18□□□□□ -0.14
MATR3-224ENST00000514488 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
MATR3-224ENST00000514488 TCOF1Q13428 1488 aaKnown RBP14.18□□□□□ -0.14
MATR3-224ENST00000514488 SYCP2Q9BX26 1530 aa14.17□□□□□ -0.14
MATR3-224ENST00000514488 HSPA1LP34931 641 aa14.17□□□□□ -0.14
MATR3-224ENST00000514488 PIP4K2BP78356 416 aa14.17□□□□□ -0.14
MATR3-224ENST00000514488 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
MATR3-224ENST00000514488 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
MATR3-224ENST00000514488 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
MATR3-224ENST00000514488 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
MATR3-224ENST00000514488 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
MATR3-224ENST00000514488 POLR1AO95602 1720 aaPredicted RBP14.14□□□□□ -0.15
MATR3-224ENST00000514488 ATP7AQ04656 1500 aa14.14□□□□□ -0.15
MATR3-224ENST00000514488 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
MATR3-224ENST00000514488 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
MATR3-224ENST00000514488 DNMT1P26358 1616 aaKnown RBP14.12□□□□□ -0.15
MATR3-224ENST00000514488 HNRNPMP52272 730 aaKnown RBP eCLIP14.12□□□□□ -0.152e-9■■■■■ 32.4
MATR3-224ENST00000514488 GGT6Q6P531 493 aa14.11□□□□□ -0.15
MATR3-224ENST00000514488 A2MP01023 1474 aa14.11□□□□□ -0.15
MATR3-224ENST00000514488 CCDC18Q5T9S5 1454 aa14.11□□□□□ -0.15
MATR3-224ENST00000514488 NEURL4Q96JN8 1562 aa14.1□□□□□ -0.15
MATR3-224ENST00000514488 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
MATR3-224ENST00000514488 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
MATR3-224ENST00000514488 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
MATR3-224ENST00000514488 ADGBQ8N7X0 1667 aa14.08□□□□□ -0.16
MATR3-224ENST00000514488 A2ML1A8K2U0 1454 aa14.08□□□□□ -0.16
MATR3-224ENST00000514488 SNPHO15079 494 aa14.08□□□□□ -0.16
MATR3-224ENST00000514488 CPS1P31327 1500 aa14.07□□□□□ -0.16
MATR3-224ENST00000514488 TOM1O60784 492 aa14.07□□□□□ -0.16
MATR3-224ENST00000514488 SHANK2Q9UPX8 1470 aa14.06□□□□□ -0.16
MATR3-224ENST00000514488 ALKQ9UM73 1620 aa14.06□□□□□ -0.16
MATR3-224ENST00000514488 LCE2DQ5TA82 110 aaPredicted RBP14.06□□□□□ -0.16
MATR3-224ENST00000514488 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
MATR3-224ENST00000514488 RTN4Q9NQC3 1192 aaKnown RBP14.03□□□□□ -0.16
MATR3-224ENST00000514488 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.16
MATR3-224ENST00000514488 NKX1-1Q15270 411 aaPredicted RBP14.02□□□□□ -0.17
MATR3-224ENST00000514488 FBXO31Q5XUX0 539 aaPredicted RBP14.02□□□□□ -0.17
MATR3-224ENST00000514488 FYCO1Q9BQS8 1478 aa14.01□□□□□ -0.17
MATR3-224ENST00000514488 KIAA1107Q9UPP5 1409 aa14.01□□□□□ -0.17
MATR3-224ENST00000514488 CFDP1Q9UEE9 299 aaPredicted RBP14.01□□□□□ -0.17
MATR3-224ENST00000514488 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
MATR3-224ENST00000514488 TNRQ92752 1358 aa14□□□□□ -0.17
MATR3-224ENST00000514488 TMEM92Q6UXU6 159 aa14□□□□□ -0.17
MATR3-224ENST00000514488 RYDENQ9NUL5 291 aaKnown RBP14□□□□□ -0.17
MATR3-224ENST00000514488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.17
MATR3-224ENST00000514488 CCNB3Q8WWL7 1395 aa13.98□□□□□ -0.17
MATR3-224ENST00000514488 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
MATR3-224ENST00000514488 ZNF644Q9H582 1327 aaPredicted RBP13.98□□□□□ -0.17
MATR3-224ENST00000514488 POTEMA6NI47 508 aa13.98□□□□□ -0.17
MATR3-224ENST00000514488 ST18O60284 1047 aa13.98□□□□□ -0.17
MATR3-224ENST00000514488 PPP1R37O75864 691 aa13.98□□□□□ -0.17
MATR3-224ENST00000514488 POTEGQ6S5H5 508 aa13.97□□□□□ -0.17
MATR3-224ENST00000514488 PZPP20742 1482 aa13.96□□□□□ -0.17
MATR3-224ENST00000514488 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
MATR3-224ENST00000514488 RNF17Q9BXT8 1623 aaKnown RBP13.96□□□□□ -0.17
MATR3-224ENST00000514488 NPHP4O75161 1426 aaPredicted RBP13.96□□□□□ -0.18
MATR3-224ENST00000514488 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
MATR3-224ENST00000514488 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
MATR3-224ENST00000514488 TIAM1Q13009 1591 aa13.95□□□□□ -0.18
MATR3-224ENST00000514488 CFAP65Q6ZU64 1925 aaKnown RBP13.94□□□□□ -0.18
MATR3-224ENST00000514488 UGGT1Q9NYU2 1555 aa13.94□□□□□ -0.18
MATR3-224ENST00000514488 LRRC7Q96NW7 1537 aa13.94□□□□□ -0.18
MATR3-224ENST00000514488 MED14O60244 1454 aa13.93□□□□□ -0.18
MATR3-224ENST00000514488 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
MATR3-224ENST00000514488 KIF3BO15066 747 aa13.93□□□□□ -0.18
MATR3-224ENST00000514488 RGS17Q9UGC6 210 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms