RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CCDC18Q5T9S5 1454 aa5.4□□□□□ -1.54
CHD1-211ENST00000514344 CCNB3Q8WWL7 1395 aa5.4□□□□□ -1.54
CHD1-211ENST00000514344 ARHGAP23Q9P227 1491 aa5.4□□□□□ -1.55
CHD1-211ENST00000514344 SLIT1O75093 1534 aa5.4□□□□□ -1.55
CHD1-211ENST00000514344 TMEM2Q9UHN6 1383 aa5.39□□□□□ -1.55
CHD1-211ENST00000514344 ATF3P18847 181 aa5.38□□□□□ -1.55
CHD1-211ENST00000514344 DDX17Q92841 729 aaKnown RBP5.38□□□□□ -1.55
CHD1-211ENST00000514344 USP21Q9UK80 565 aa5.38□□□□□ -1.55
CHD1-211ENST00000514344 NKTRP30414 1462 aaKnown RBP5.38□□□□□ -1.55
CHD1-211ENST00000514344 KDM5AP29375 1690 aaKnown RBP5.38□□□□□ -1.55
CHD1-211ENST00000514344 MBD5Q9P267 1494 aa5.38□□□□□ -1.55
CHD1-211ENST00000514344 BRINP3Q76B58 766 aa5.38□□□□□ -1.55
CHD1-211ENST00000514344 ABCC3O15438 1527 aa5.38□□□□□ -1.55
CHD1-211ENST00000514344 LRP5O75197 1615 aa5.38□□□□□ -1.55
CHD1-211ENST00000514344 AHDC1Q5TGY3 1603 aaPredicted RBP5.38□□□□□ -1.55
CHD1-211ENST00000514344 RTEL1-TNFRSF6BF6WH68 1400 aa5.38□□□□□ -1.55
CHD1-211ENST00000514344 CADPS2Q86UW7 1296 aa5.37□□□□□ -1.55
CHD1-211ENST00000514344 CCDC125Q86Z20 511 aa5.37□□□□□ -1.55
CHD1-211ENST00000514344 DIP2AQ14689 1571 aa5.37□□□□□ -1.55
CHD1-211ENST00000514344 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
CHD1-211ENST00000514344 PIK3C2BO00750 1634 aa5.37□□□□□ -1.55
CHD1-211ENST00000514344 SENP3-EIF4A1A0A087X0R7 540 aa5.37□□□□□ -1.55
CHD1-211ENST00000514344 HRCP23327 699 aa5.37□□□□□ -1.55
CHD1-211ENST00000514344 CEP152O94986 1710 aa5.36□□□□□ -1.55
CHD1-211ENST00000514344 TRPC5Q9UL62 973 aaPredicted RBP5.36□□□□□ -1.55
CHD1-211ENST00000514344 NWD1Q149M9 1564 aa5.36□□□□□ -1.55
CHD1-211ENST00000514344 TET3O43151 1660 aa5.36□□□□□ -1.55
CHD1-211ENST00000514344 SF3B2Q13435 895 aaKnown RBP5.36□□□□□ -1.55
CHD1-211ENST00000514344 LRRC59Q96AG4 307 aaKnown RBP5.36□□□□□ -1.55
CHD1-211ENST00000514344 CASKIN1Q8WXD9 1431 aa5.36□□□□□ -1.55
CHD1-211ENST00000514344 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.35□□□□□ -1.55
CHD1-211ENST00000514344 C19orf44Q9H6X5 657 aa5.35□□□□□ -1.55
CHD1-211ENST00000514344 MTUS2Q5JR59 1369 aa5.35□□□□□ -1.55
CHD1-211ENST00000514344 IDI1Q13907 227 aa5.35□□□□□ -1.55
CHD1-211ENST00000514344 EFCAB6Q5THR3 1501 aa5.35□□□□□ -1.55
CHD1-211ENST00000514344 CCDC141Q6ZP82 1450 aa5.35□□□□□ -1.55
CHD1-211ENST00000514344 BLMP54132 1417 aaPredicted RBP5.35□□□□□ -1.55
CHD1-211ENST00000514344 DSG3P32926 999 aa5.34□□□□□ -1.55
CHD1-211ENST00000514344 EEA1Q15075 1411 aa5.34□□□□□ -1.55
CHD1-211ENST00000514344 PNPLA6Q8IY17 1366 aa5.34□□□□□ -1.55
CHD1-211ENST00000514344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.34□□□□□ -1.55
CHD1-211ENST00000514344 RNF216Q9NWF9 866 aaPredicted RBP5.34□□□□□ -1.55
CHD1-211ENST00000514344 SETD5Q9C0A6 1442 aa5.34□□□□□ -1.55
CHD1-211ENST00000514344 PPP1R15AO75807 674 aaPredicted RBP5.34□□□□□ -1.56
CHD1-211ENST00000514344 TSPY4P0CV99 314 aa5.34□□□□□ -1.56
CHD1-211ENST00000514344 TSPY10P0CW01 314 aa5.34□□□□□ -1.56
CHD1-211ENST00000514344 ASXL1Q8IXJ9 1541 aa5.33□□□□□ -1.56
CHD1-211ENST00000514344 R3HDM1Q15032 1099 aaKnown RBP5.33□□□□□ -1.56
CHD1-211ENST00000514344 PLSCR2Q9NRY7 297 aa5.33□□□□□ -1.56
CHD1-211ENST00000514344 CHD2O14647 1828 aaKnown RBP5.33□□□□□ -1.56
CHD1-211ENST00000514344 NHSL1Q5SYE7 1610 aa5.32□□□□□ -1.56
CHD1-211ENST00000514344 MROH1Q8NDA8 1641 aa5.32□□□□□ -1.56
CHD1-211ENST00000514344 FYCO1Q9BQS8 1478 aa5.32□□□□□ -1.56
CHD1-211ENST00000514344 FNBP4Q8N3X1 1017 aaPredicted RBP5.31□□□□□ -1.56
CHD1-211ENST00000514344 GJD4Q96KN9 370 aaPredicted RBP5.31□□□□□ -1.56
CHD1-211ENST00000514344 CAMSAP2Q08AD1 1489 aa5.31□□□□□ -1.56
CHD1-211ENST00000514344 BCL9LQ86UU0 1499 aa5.31□□□□□ -1.56
CHD1-211ENST00000514344 ATRNO75882 1429 aa5.31□□□□□ -1.56
CHD1-211ENST00000514344 EN1Q05925 392 aaPredicted RBP5.3□□□□□ -1.56
CHD1-211ENST00000514344 ZNF784Q8NCA9 323 aaPredicted RBP5.3□□□□□ -1.56
CHD1-211ENST00000514344 NCOA3Q9Y6Q9 1424 aa5.3□□□□□ -1.56
CHD1-211ENST00000514344 A0A0G2JS52 829 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 BAG6P46379 1132 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 MYT1Q01538 1121 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 RSPH4AQ5TD94 716 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 AMOTL2Q9Y2J4 779 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 PCNTO95613 3336 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 MST1RQ04912 1400 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 ARHGAP31Q2M1Z3 1444 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 BRWD3Q6RI45 1802 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 PLEKHG1Q9ULL1 1385 aa5.29□□□□□ -1.56
CHD1-211ENST00000514344 CHGAP10645 457 aaKnown RBP5.28□□□□□ -1.56
CHD1-211ENST00000514344 CHRDL2Q6WN34 429 aa5.28□□□□□ -1.56
CHD1-211ENST00000514344 TBX22Q9Y458 520 aa5.28□□□□□ -1.56
CHD1-211ENST00000514344 ADGRB3O60242 1522 aa5.28□□□□□ -1.56
CHD1-211ENST00000514344 C1QTNF8P60827 252 aa5.28□□□□□ -1.56
CHD1-211ENST00000514344 SEPT12Q8IYM1 358 aa5.28□□□□□ -1.56
CHD1-211ENST00000514344 PPP1R1BQ9UD71 204 aaPredicted RBP5.28□□□□□ -1.56
CHD1-211ENST00000514344 EIF2AK4Q9P2K8 1649 aaKnown RBP5.28□□□□□ -1.56
CHD1-211ENST00000514344 FAM182BQ5T319 152 aa5.28□□□□□ -1.56
CHD1-211ENST00000514344 MYO5BQ9ULV0 1848 aa5.28□□□□□ -1.56
CHD1-211ENST00000514344 RIMS2Q9UQ26 1411 aa5.27□□□□□ -1.57
CHD1-211ENST00000514344 CCDC9Q9Y3X0 531 aaKnown RBP5.27□□□□□ -1.57
CHD1-211ENST00000514344 ZFYVE9O95405 1425 aa5.27□□□□□ -1.57
CHD1-211ENST00000514344 RALGAPBQ86X10 1494 aa5.27□□□□□ -1.57
CHD1-211ENST00000514344 PLEKHG5O94827 1062 aa5.27□□□□□ -1.57
CHD1-211ENST00000514344 ORAI2Q96SN7 254 aa5.27□□□□□ -1.57
CHD1-211ENST00000514344 RRP7BPQ9NSQ0 103 aa5.27□□□□□ -1.57
CHD1-211ENST00000514344 PTCH1Q13635 1447 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 GLI3P10071 1580 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 XPCQ01831 940 aaPredicted RBP5.26□□□□□ -1.57
CHD1-211ENST00000514344 KRT27Q7Z3Y8 459 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 DCCP43146 1447 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 ADAMTS13Q76LX8 1427 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 CAMTA1Q9Y6Y1 1673 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 HDGFP51858 240 aaKnown RBP5.26□□□□□ -1.57
CHD1-211ENST00000514344 PTPRUQ92729 1446 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 TRPM2O94759 1503 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 UNC13BO14795 1591 aa5.26□□□□□ -1.57
CHD1-211ENST00000514344 SLC52A1Q9NWF4 448 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms