RNA–Protein interactions for RNA: ENST00000513993.5

SLC38A9-220, Transcript of solute carrier family 38 member 9, humanhuman

TSL 4

Gene SLC38A9, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-220ENST00000513993 CD46P15529 392 aa12.18□□□□□ -0.46
SLC38A9-220ENST00000513993 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
SLC38A9-220ENST00000513993 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
SLC38A9-220ENST00000513993 SPIRE2Q8WWL2 714 aa12.16□□□□□ -0.46
SLC38A9-220ENST00000513993 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
SLC38A9-220ENST00000513993 RABGEF1Q9UJ41 708 aa12.15□□□□□ -0.46
SLC38A9-220ENST00000513993 CLK2P49760 499 aaKnown RBP12.14□□□□□ -0.47
SLC38A9-220ENST00000513993 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
SLC38A9-220ENST00000513993 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
SLC38A9-220ENST00000513993 LIMD1Q9UGP4 676 aa12.13□□□□□ -0.47
SLC38A9-220ENST00000513993 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
SLC38A9-220ENST00000513993 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
SLC38A9-220ENST00000513993 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
SLC38A9-220ENST00000513993 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
SLC38A9-220ENST00000513993 ZMYND15Q9H091 742 aa12.12□□□□□ -0.47
SLC38A9-220ENST00000513993 VPS9D1Q9Y2B5 631 aa12.12□□□□□ -0.47
SLC38A9-220ENST00000513993 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
SLC38A9-220ENST00000513993 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLC38A9-220ENST00000513993 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
SLC38A9-220ENST00000513993 PBX2P40425 430 aa12.1□□□□□ -0.47
SLC38A9-220ENST00000513993 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
SLC38A9-220ENST00000513993 FLIIQ13045 1269 aa12.09□□□□□ -0.47
SLC38A9-220ENST00000513993 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
SLC38A9-220ENST00000513993 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.48
SLC38A9-220ENST00000513993 NDUFV2P19404 249 aa12.08□□□□□ -0.48
SLC38A9-220ENST00000513993 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
SLC38A9-220ENST00000513993 SLC10A3P09131 477 aa12.07□□□□□ -0.48
SLC38A9-220ENST00000513993 FAM98CQ17RN3 349 aaKnown RBP12.06□□□□□ -0.48
SLC38A9-220ENST00000513993 KDM4AO75164 1064 aa12.05□□□□□ -0.48
SLC38A9-220ENST00000513993 HDGFP51858 240 aaKnown RBP12.05□□□□□ -0.48
SLC38A9-220ENST00000513993 RSBN1LQ6PCB5 846 aaPredicted RBP12.05□□□□□ -0.48
SLC38A9-220ENST00000513993 SAMD7Q7Z3H4 446 aa12.05□□□□□ -0.48
SLC38A9-220ENST00000513993 SPTLC1O15269 473 aa12.04□□□□□ -0.48
SLC38A9-220ENST00000513993 GCGRP47871 477 aa12.04□□□□□ -0.48
SLC38A9-220ENST00000513993 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
SLC38A9-220ENST00000513993 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
SLC38A9-220ENST00000513993 RNF40O75150 1001 aa12.02□□□□□ -0.49
SLC38A9-220ENST00000513993 RFC5P40937 340 aa12.02□□□□□ -0.49
SLC38A9-220ENST00000513993 MCM6Q14566 821 aa12.02□□□□□ -0.49
SLC38A9-220ENST00000513993 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
SLC38A9-220ENST00000513993 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
SLC38A9-220ENST00000513993 QPCTQ16769 361 aa12.01□□□□□ -0.49
SLC38A9-220ENST00000513993 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
SLC38A9-220ENST00000513993 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
SLC38A9-220ENST00000513993 LAPTM4BQ86VI4 370 aa11.99□□□□□ -0.49
SLC38A9-220ENST00000513993 HLA-CQ95604 372 aa11.99□□□□□ -0.49
SLC38A9-220ENST00000513993 HOXA2O43364 376 aa11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 UBTFP17480 764 aaKnown RBP11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 SLC4A3P48751 1232 aa11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 LSM11P83369 360 aaKnown RBP eCLIP11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 GUCA2AQ02747 115 aa11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 PPP2R2DQ66LE6 453 aa11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 ADGRD1Q6QNK2 874 aa11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 ZFRQ96KR1 1074 aaKnown RBP11.98□□□□□ -0.49
SLC38A9-220ENST00000513993 TK2O00142 265 aa11.97□□□□□ -0.49
SLC38A9-220ENST00000513993 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
SLC38A9-220ENST00000513993 MRPL50Q8N5N7 158 aaKnown RBP11.97□□□□□ -0.49
SLC38A9-220ENST00000513993 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
SLC38A9-220ENST00000513993 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.49
SLC38A9-220ENST00000513993 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.49
SLC38A9-220ENST00000513993 CFHP08603 1231 aa11.96□□□□□ -0.49
SLC38A9-220ENST00000513993 USP46P62068 366 aa11.96□□□□□ -0.49
SLC38A9-220ENST00000513993 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
SLC38A9-220ENST00000513993 NUTM2DQ5VT03 806 aaPredicted RBP11.96□□□□□ -0.49
SLC38A9-220ENST00000513993 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
SLC38A9-220ENST00000513993 LILRB3O75022 631 aa11.95□□□□□ -0.5
SLC38A9-220ENST00000513993 FDX1P10109 184 aa11.95□□□□□ -0.5
SLC38A9-220ENST00000513993 ANKRD13DQ6ZTN6 518 aa11.95□□□□□ -0.5
SLC38A9-220ENST00000513993 GJA5P36382 358 aa11.94□□□□□ -0.5
SLC38A9-220ENST00000513993 FUT2Q10981 343 aa11.94□□□□□ -0.5
SLC38A9-220ENST00000513993 TMEM259Q4ZIN3 620 aa11.94□□□□□ -0.5
SLC38A9-220ENST00000513993 POM121Q96HA1 1249 aa11.94□□□□□ -0.5
SLC38A9-220ENST00000513993 PCDHGC3Q9UN70 934 aa11.94□□□□□ -0.5
SLC38A9-220ENST00000513993 HRCP23327 699 aa11.92□□□□□ -0.5
SLC38A9-220ENST00000513993 BANK1Q8NDB2 785 aa11.92□□□□□ -0.5
SLC38A9-220ENST00000513993 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
SLC38A9-220ENST00000513993 ARID3CA6NKF2 412 aa11.91□□□□□ -0.5
SLC38A9-220ENST00000513993 HRO43593 1189 aa11.91□□□□□ -0.5
SLC38A9-220ENST00000513993 AP1G2O75843 785 aa11.91□□□□□ -0.5
SLC38A9-220ENST00000513993 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
SLC38A9-220ENST00000513993 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
SLC38A9-220ENST00000513993 ZBTB3Q9H5J0 574 aa11.9□□□□□ -0.5
SLC38A9-220ENST00000513993 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.9□□□□□ -0.5
SLC38A9-220ENST00000513993 A6NJR5 290 aa11.89□□□□□ -0.51
SLC38A9-220ENST00000513993 PRPF38BQ5VTL8 546 aaKnown RBP11.89□□□□□ -0.51
SLC38A9-220ENST00000513993 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
SLC38A9-220ENST00000513993 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
SLC38A9-220ENST00000513993 C1orf115Q9H7X2 142 aa11.87□□□□□ -0.51
SLC38A9-220ENST00000513993 RAD21O60216 631 aa11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 TRAK2O60296 914 aa11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 KMT5BQ4FZB7 885 aa11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 MTMR14Q8NCE2 650 aa11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 COG6Q9Y2V7 657 aa11.86□□□□□ -0.51
SLC38A9-220ENST00000513993 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
SLC38A9-220ENST00000513993 APBB1O00213 710 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms