RNA–Protein interactions for RNA: ENST00000513522.5

CCSER1-211, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 605 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-211ENST00000513522 FAM181BA6NEQ2 426 aa7.75□□□□□ -1.17
CCSER1-211ENST00000513522 HDGFP51858 240 aaKnown RBP7.75□□□□□ -1.17
CCSER1-211ENST00000513522 CDCA7LQ96GN5 454 aa7.75□□□□□ -1.17
CCSER1-211ENST00000513522 NKX1-1Q15270 411 aaPredicted RBP7.74□□□□□ -1.17
CCSER1-211ENST00000513522 TSR1Q2NL82 804 aaKnown RBP7.74□□□□□ -1.17
CCSER1-211ENST00000513522 TERTO14746 1132 aaKnown RBP7.73□□□□□ -1.17
CCSER1-211ENST00000513522 PPEF1O14829 653 aaPredicted RBP7.73□□□□□ -1.17
CCSER1-211ENST00000513522 AVPP01185 164 aa7.73□□□□□ -1.17
CCSER1-211ENST00000513522 PRSS12P56730 875 aa7.73□□□□□ -1.17
CCSER1-211ENST00000513522 RYDENQ9NUL5 291 aaKnown RBP7.73□□□□□ -1.17
CCSER1-211ENST00000513522 PNMA3Q9UL41 463 aa7.73□□□□□ -1.17
CCSER1-211ENST00000513522 NECTIN2Q92692 538 aa7.72□□□□□ -1.17
CCSER1-211ENST00000513522 DDX12PQ92771 950 aa7.72□□□□□ -1.17
CCSER1-211ENST00000513522 AXIN1O15169 862 aa7.71□□□□□ -1.18
CCSER1-211ENST00000513522 EN1Q05925 392 aaPredicted RBP7.71□□□□□ -1.18
CCSER1-211ENST00000513522 CECR2Q9BXF3 1484 aa7.7□□□□□ -1.18
CCSER1-211ENST00000513522 NBPF26B4DH59 902 aa7.7□□□□□ -1.18
CCSER1-211ENST00000513522 PKD2L1Q9P0L9 805 aa7.7□□□□□ -1.18
CCSER1-211ENST00000513522 MAP3K7O43318 606 aa7.69□□□□□ -1.18
CCSER1-211ENST00000513522 DNAJC5Q9H3Z4 198 aa7.69□□□□□ -1.18
CCSER1-211ENST00000513522 S1PR4O95977 384 aa7.67□□□□□ -1.18
CCSER1-211ENST00000513522 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
CCSER1-211ENST00000513522 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
CCSER1-211ENST00000513522 FOXC1Q12948 553 aa7.67□□□□□ -1.18
CCSER1-211ENST00000513522 CTC1Q2NKJ3 1217 aa7.67□□□□□ -1.18
CCSER1-211ENST00000513522 LMOD2Q6P5Q4 547 aa7.67□□□□□ -1.18
CCSER1-211ENST00000513522 NUDT18Q6ZVK8 323 aa7.67□□□□□ -1.18
CCSER1-211ENST00000513522 PCDHB3Q9Y5E6 796 aa7.67□□□□□ -1.18
CCSER1-211ENST00000513522 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
CCSER1-211ENST00000513522 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
CCSER1-211ENST00000513522 DPYSL4O14531 572 aa7.65□□□□□ -1.18
CCSER1-211ENST00000513522 TLL1O43897 1013 aa7.65□□□□□ -1.18
CCSER1-211ENST00000513522 CHGAP10645 457 aaKnown RBP7.65□□□□□ -1.18
CCSER1-211ENST00000513522 SNRPBP14678 240 aaKnown RBP7.65□□□□□ -1.18
CCSER1-211ENST00000513522 NBR1Q14596 966 aa7.65□□□□□ -1.18
CCSER1-211ENST00000513522 SLF2Q8IX21 1173 aa7.65□□□□□ -1.18
CCSER1-211ENST00000513522 TOR4AQ9NXH8 423 aa7.65□□□□□ -1.18
CCSER1-211ENST00000513522 EIF4G1Q04637 1599 aaKnown RBP7.64□□□□□ -1.19
CCSER1-211ENST00000513522 PLA2G2CQ5R387 149 aa7.64□□□□□ -1.19
CCSER1-211ENST00000513522 ZSCAN1Q8NBB4 408 aa7.64□□□□□ -1.19
CCSER1-211ENST00000513522 CERKQ8TCT0 537 aa7.64□□□□□ -1.19
CCSER1-211ENST00000513522 PRR14Q9BWN1 585 aa7.63□□□□□ -1.19
CCSER1-211ENST00000513522 CAMK2BQ13554 666 aa7.62□□□□□ -1.19
CCSER1-211ENST00000513522 MROH2BQ7Z745 1585 aa7.61□□□□□ -1.19
CCSER1-211ENST00000513522 CYP4X1Q8N118 509 aa7.59□□□□□ -1.19
CCSER1-211ENST00000513522 TRIM47Q96LD4 638 aa7.58□□□□□ -1.2
CCSER1-211ENST00000513522 ATP13A2Q9NQ11 1180 aa7.58□□□□□ -1.2
CCSER1-211ENST00000513522 CC2D2AQ9P2K1 1620 aa7.58□□□□□ -1.2
CCSER1-211ENST00000513522 RSF1Q96T23 1441 aaPredicted RBP7.58□□□□□ -1.2
CCSER1-211ENST00000513522 SMARCA4P51532 1647 aa7.57□□□□□ -1.2
CCSER1-211ENST00000513522 GMPRP36959 345 aa7.57□□□□□ -1.2
CCSER1-211ENST00000513522 BAZ1AQ9NRL2 1556 aaPredicted RBP7.57□□□□□ -1.2
CCSER1-211ENST00000513522 ATAD2BQ9ULI0 1458 aa7.56□□□□□ -1.2
CCSER1-211ENST00000513522 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
CCSER1-211ENST00000513522 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
CCSER1-211ENST00000513522 SENP2Q9HC62 589 aa7.56□□□□□ -1.2
CCSER1-211ENST00000513522 ADH1BP00325 375 aa7.55□□□□□ -1.2
CCSER1-211ENST00000513522 PRIM1P49642 420 aaKnown RBP7.55□□□□□ -1.2
CCSER1-211ENST00000513522 RBM27Q9P2N5 1060 aaKnown RBP7.55□□□□□ -1.2
CCSER1-211ENST00000513522 GTPBP6O43824 516 aaPredicted RBP7.54□□□□□ -1.2
CCSER1-211ENST00000513522 SLC6A16Q9GZN6 736 aa7.54□□□□□ -1.2
CCSER1-211ENST00000513522 RPIAP49247 311 aa7.53□□□□□ -1.2
CCSER1-211ENST00000513522 KCTD17Q8N5Z5 321 aa7.53□□□□□ -1.2
CCSER1-211ENST00000513522 NCAPD3P42695 1498 aa7.53□□□□□ -1.2
CCSER1-211ENST00000513522 TTC13Q8NBP0 860 aa7.52□□□□□ -1.21
CCSER1-211ENST00000513522 CADPS2Q86UW7 1296 aa7.51□□□□□ -1.21
CCSER1-211ENST00000513522 ACTN4O43707 911 aaKnown RBP7.5□□□□□ -1.21
CCSER1-211ENST00000513522 CD2BP2O95400 341 aaKnown RBP7.5□□□□□ -1.21
CCSER1-211ENST00000513522 KIFC2Q96AC6 838 aa7.5□□□□□ -1.21
CCSER1-211ENST00000513522 NXF1Q9UBU9 619 aaKnown RBP7.5□□□□□ -1.21
CCSER1-211ENST00000513522 PEG3Q9GZU2 1588 aa7.5□□□□□ -1.21
CCSER1-211ENST00000513522 TTC24A2A3L6 582 aaPredicted RBP7.49□□□□□ -1.21
CCSER1-211ENST00000513522 PDIA6Q15084 440 aa7.49□□□□□ -1.21
CCSER1-211ENST00000513522 IRF7Q92985 503 aa7.49□□□□□ -1.21
CCSER1-211ENST00000513522 EYA1Q99502 592 aa7.49□□□□□ -1.21
CCSER1-211ENST00000513522 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
CCSER1-211ENST00000513522 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
CCSER1-211ENST00000513522 WIZO95785 1651 aa7.48□□□□□ -1.21
CCSER1-211ENST00000513522 SMPD1P17405 629 aa7.48□□□□□ -1.21
CCSER1-211ENST00000513522 KCNMA1Q12791 1236 aa7.48□□□□□ -1.21
CCSER1-211ENST00000513522 SUPT5HO00267 1087 aaKnown RBP7.47□□□□□ -1.21
CCSER1-211ENST00000513522 GSK3AP49840 483 aa7.47□□□□□ -1.21
CCSER1-211ENST00000513522 NR1I2O75469 434 aa7.46□□□□□ -1.22
CCSER1-211ENST00000513522 BAZ1BQ9UIG0 1483 aaKnown RBP7.46□□□□□ -1.22
CCSER1-211ENST00000513522 SPDYE16A6NNV3 312 aaPredicted RBP7.45□□□□□ -1.22
CCSER1-211ENST00000513522 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
CCSER1-211ENST00000513522 PADI6Q6TGC4 694 aa7.45□□□□□ -1.22
CCSER1-211ENST00000513522 NPAS3Q8IXF0 933 aa7.45□□□□□ -1.22
CCSER1-211ENST00000513522 HMGXB3Q12766 1538 aa7.45□□□□□ -1.22
CCSER1-211ENST00000513522 SCUBE3Q8IX30 993 aa7.43□□□□□ -1.22
CCSER1-211ENST00000513522 RTN4Q9NQC3 1192 aaKnown RBP7.43□□□□□ -1.22
CCSER1-211ENST00000513522 GRXCR2A6NFK2 248 aa7.42□□□□□ -1.22
CCSER1-211ENST00000513522 SNIP1Q8TAD8 396 aaKnown RBP7.42□□□□□ -1.22
CCSER1-211ENST00000513522 ERBB4Q15303 1308 aa7.42□□□□□ -1.22
CCSER1-211ENST00000513522 H3BM21 787 aa7.41□□□□□ -1.22
CCSER1-211ENST00000513522 OSBPP22059 807 aa7.41□□□□□ -1.22
CCSER1-211ENST00000513522 XP32Q5T750 250 aa7.41□□□□□ -1.22
CCSER1-211ENST00000513522 SPSB2Q99619 263 aa7.41□□□□□ -1.22
CCSER1-211ENST00000513522 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
CCSER1-211ENST00000513522 TOP2AP11388 1531 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms