RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CEBPAP49715 358 aaPredicted RBP11.2□□□□□ -0.62
HMGXB3-204ENST00000513318 MPHOSPH9Q99550 1183 aa11.2□□□□□ -0.62
HMGXB3-204ENST00000513318 PTPRTO14522 1441 aa11.19□□□□□ -0.62
HMGXB3-204ENST00000513318 TNRQ92752 1358 aa11.19□□□□□ -0.62
HMGXB3-204ENST00000513318 PKD2Q13563 968 aa11.19□□□□□ -0.62
HMGXB3-204ENST00000513318 UGGT1Q9NYU2 1555 aa11.18□□□□□ -0.62
HMGXB3-204ENST00000513318 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
HMGXB3-204ENST00000513318 UHRF1BP1Q6BDS2 1440 aa11.18□□□□□ -0.62
HMGXB3-204ENST00000513318 FBXO31Q5XUX0 539 aaPredicted RBP11.17□□□□□ -0.62
HMGXB3-204ENST00000513318 ADGRB3O60242 1522 aa11.17□□□□□ -0.62
HMGXB3-204ENST00000513318 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
HMGXB3-204ENST00000513318 TMEM131LA2VDJ0 1609 aa11.17□□□□□ -0.62
HMGXB3-204ENST00000513318 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
HMGXB3-204ENST00000513318 NEURL4Q96JN8 1562 aa11.16□□□□□ -0.62
HMGXB3-204ENST00000513318 IFT172Q9UG01 1749 aa11.15□□□□□ -0.62
HMGXB3-204ENST00000513318 PLA2R1Q13018 1463 aa11.15□□□□□ -0.62
HMGXB3-204ENST00000513318 PPLO60437 1756 aa11.15□□□□□ -0.62
HMGXB3-204ENST00000513318 LMTK3Q96Q04 1460 aa11.14□□□□□ -0.63
HMGXB3-204ENST00000513318 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
HMGXB3-204ENST00000513318 CCDC144AA2RUR9 1427 aa11.14□□□□□ -0.63
HMGXB3-204ENST00000513318 ANKRD30BQ9BXX2 1392 aa11.13□□□□□ -0.63
HMGXB3-204ENST00000513318 IDI1Q13907 227 aa11.1□□□□□ -0.63
HMGXB3-204ENST00000513318 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
HMGXB3-204ENST00000513318 SLIT1O75093 1534 aa11.09□□□□□ -0.63
HMGXB3-204ENST00000513318 ARHGAP23Q9P227 1491 aa11.08□□□□□ -0.64
HMGXB3-204ENST00000513318 NEXMIFQ5QGS0 1516 aa11.08□□□□□ -0.64
HMGXB3-204ENST00000513318 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
HMGXB3-204ENST00000513318 SPATA31E1Q6ZUB1 1445 aa11.07□□□□□ -0.64
HMGXB3-204ENST00000513318 IQGAP1P46940 1657 aa11.07□□□□□ -0.64
HMGXB3-204ENST00000513318 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
HMGXB3-204ENST00000513318 ZFYVE9O95405 1425 aa11.05□□□□□ -0.64
HMGXB3-204ENST00000513318 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
HMGXB3-204ENST00000513318 TMEM2Q9UHN6 1383 aa11.04□□□□□ -0.64
HMGXB3-204ENST00000513318 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
HMGXB3-204ENST00000513318 SCAF11Q99590 1463 aaKnown RBP11.04□□□□□ -0.64
HMGXB3-204ENST00000513318 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
HMGXB3-204ENST00000513318 LAMC1P11047 1609 aa11.03□□□□□ -0.64
HMGXB3-204ENST00000513318 SETD1AO15047 1707 aaKnown RBP11.03□□□□□ -0.64
HMGXB3-204ENST00000513318 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.64
HMGXB3-204ENST00000513318 MYOM2P54296 1465 aa11.02□□□□□ -0.65
HMGXB3-204ENST00000513318 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
HMGXB3-204ENST00000513318 MED14O60244 1454 aa11.01□□□□□ -0.65
HMGXB3-204ENST00000513318 HSPA2P54652 639 aa11.01□□□□□ -0.65
HMGXB3-204ENST00000513318 ZNF326Q5BKZ1 582 aaKnown RBP11.01□□□□□ -0.65
HMGXB3-204ENST00000513318 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
HMGXB3-204ENST00000513318 KIAA1210Q9ULL0 1709 aa11.01□□□□□ -0.65
HMGXB3-204ENST00000513318 DIP2AQ14689 1571 aa11□□□□□ -0.65
HMGXB3-204ENST00000513318 SETBP1Q9Y6X0 1596 aa11□□□□□ -0.65
HMGXB3-204ENST00000513318 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
HMGXB3-204ENST00000513318 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.99□□□□□ -0.65
HMGXB3-204ENST00000513318 SIN3AQ96ST3 1273 aa10.99□□□□□ -0.65
HMGXB3-204ENST00000513318 EID1Q9Y6B2 187 aa10.99□□□□□ -0.65
HMGXB3-204ENST00000513318 CHD2O14647 1828 aaKnown RBP10.99□□□□□ -0.65
HMGXB3-204ENST00000513318 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
HMGXB3-204ENST00000513318 ANKLE2Q86XL3 938 aa10.98□□□□□ -0.65
HMGXB3-204ENST00000513318 TONSLQ96HA7 1378 aa10.98□□□□□ -0.65
HMGXB3-204ENST00000513318 PLEKHG1Q9ULL1 1385 aa10.98□□□□□ -0.65
HMGXB3-204ENST00000513318 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
HMGXB3-204ENST00000513318 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
HMGXB3-204ENST00000513318 PPP1R15AO75807 674 aaPredicted RBP10.97□□□□□ -0.65
HMGXB3-204ENST00000513318 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
HMGXB3-204ENST00000513318 TXNDC2Q86VQ3 553 aa10.97□□□□□ -0.65
HMGXB3-204ENST00000513318 TRPM1Q7Z4N2 1603 aa10.97□□□□□ -0.65
HMGXB3-204ENST00000513318 PIK3C2GO75747 1445 aa10.96□□□□□ -0.65
HMGXB3-204ENST00000513318 LTKP29376 864 aa10.96□□□□□ -0.65
HMGXB3-204ENST00000513318 FKBP8Q14318 412 aa10.96□□□□□ -0.65
HMGXB3-204ENST00000513318 STAC3Q96MF2 364 aa10.96□□□□□ -0.65
HMGXB3-204ENST00000513318 KNDC1Q76NI1 1749 aa10.95□□□□□ -0.66
HMGXB3-204ENST00000513318 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
HMGXB3-204ENST00000513318 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
HMGXB3-204ENST00000513318 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
HMGXB3-204ENST00000513318 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
HMGXB3-204ENST00000513318 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
HMGXB3-204ENST00000513318 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
HMGXB3-204ENST00000513318 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
HMGXB3-204ENST00000513318 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
HMGXB3-204ENST00000513318 NWD1Q149M9 1564 aa10.94□□□□□ -0.66
HMGXB3-204ENST00000513318 XRN1Q8IZH2 1706 aaKnown RBP10.93□□□□□ -0.66
HMGXB3-204ENST00000513318 NUTM2DQ5VT03 806 aaPredicted RBP10.93□□□□□ -0.66
HMGXB3-204ENST00000513318 DCAF11Q8TEB1 546 aa10.93□□□□□ -0.66
HMGXB3-204ENST00000513318 L3MBTL2Q969R5 705 aa10.93□□□□□ -0.66
HMGXB3-204ENST00000513318 TIMELESSQ9UNS1 1208 aa10.93□□□□□ -0.66
HMGXB3-204ENST00000513318 ADAMTS13Q76LX8 1427 aa10.92□□□□□ -0.66
HMGXB3-204ENST00000513318 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
HMGXB3-204ENST00000513318 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
HMGXB3-204ENST00000513318 ASXL1Q8IXJ9 1541 aa10.92□□□□□ -0.66
HMGXB3-204ENST00000513318 ADGRF5Q8IZF2 1346 aa10.91□□□□□ -0.66
HMGXB3-204ENST00000513318 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
HMGXB3-204ENST00000513318 ARHGEF28Q8N1W1 1705 aaKnown RBP10.9□□□□□ -0.66
HMGXB3-204ENST00000513318 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.66
HMGXB3-204ENST00000513318 XIRP1Q702N8 1843 aaKnown RBP10.9□□□□□ -0.66
HMGXB3-204ENST00000513318 BCANQ96GW7 911 aa10.89□□□□□ -0.67
HMGXB3-204ENST00000513318 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
HMGXB3-204ENST00000513318 ADGRB1O14514 1584 aa10.89□□□□□ -0.67
HMGXB3-204ENST00000513318 PIK3R4Q99570 1358 aa10.89□□□□□ -0.67
HMGXB3-204ENST00000513318 RALGAPBQ86X10 1494 aa10.88□□□□□ -0.67
HMGXB3-204ENST00000513318 TBX22Q9Y458 520 aa10.88□□□□□ -0.67
HMGXB3-204ENST00000513318 CPS1P31327 1500 aa10.88□□□□□ -0.67
HMGXB3-204ENST00000513318 NKTRP30414 1462 aaKnown RBP10.87□□□□□ -0.67
HMGXB3-204ENST00000513318 SLC26A8Q96RN1 970 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms