RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 TMEM134Q9H6X4 195 aa12.01□□□□□ -0.49
CHD1-209ENST00000512844 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.01□□□□□ -0.49
CHD1-209ENST00000512844 AMHR2Q16671 573 aa12□□□□□ -0.49
CHD1-209ENST00000512844 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CHD1-209ENST00000512844 SLF2Q8IX21 1173 aa12□□□□□ -0.49
CHD1-209ENST00000512844 NECTIN2Q92692 538 aa12□□□□□ -0.49
CHD1-209ENST00000512844 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
CHD1-209ENST00000512844 PDE4DQ08499 809 aa11.99□□□□□ -0.49
CHD1-209ENST00000512844 SWT1Q5T5J6 900 aaKnown RBP11.99□□□□□ -0.49
CHD1-209ENST00000512844 SULF1Q8IWU6 871 aa11.99□□□□□ -0.49
CHD1-209ENST00000512844 KCTD12Q96CX2 325 aaKnown RBP11.99□□□□□ -0.49
CHD1-209ENST00000512844 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
CHD1-209ENST00000512844 NLRP7Q8WX94 980 aa11.98□□□□□ -0.49
CHD1-209ENST00000512844 PHOX2BQ99453 314 aa11.97□□□□□ -0.49
CHD1-209ENST00000512844 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
CHD1-209ENST00000512844 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
CHD1-209ENST00000512844 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
CHD1-209ENST00000512844 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
CHD1-209ENST00000512844 RNF166Q96A37 237 aaPredicted RBP11.93□□□□□ -0.5
CHD1-209ENST00000512844 BCAMP50895 628 aa11.92□□□□□ -0.5
CHD1-209ENST00000512844 PPP4CP60510 307 aa11.92□□□□□ -0.5
CHD1-209ENST00000512844 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
CHD1-209ENST00000512844 PARP9Q8IXQ6 854 aa11.92□□□□□ -0.5
CHD1-209ENST00000512844 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
CHD1-209ENST00000512844 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
CHD1-209ENST00000512844 TSR3Q9UJK0 312 aaKnown RBP11.9□□□□□ -0.5
CHD1-209ENST00000512844 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
CHD1-209ENST00000512844 PTPN5P54829 565 aa11.88□□□□□ -0.51
CHD1-209ENST00000512844 PRR14Q9BWN1 585 aa11.88□□□□□ -0.51
CHD1-209ENST00000512844 KMT5BQ4FZB7 885 aa11.87□□□□□ -0.51
CHD1-209ENST00000512844 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
CHD1-209ENST00000512844 KDM4CQ9H3R0 1056 aa11.86□□□□□ -0.51
CHD1-209ENST00000512844 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
CHD1-209ENST00000512844 CFHP08603 1231 aa11.84□□□□□ -0.51
CHD1-209ENST00000512844 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
CHD1-209ENST00000512844 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
CHD1-209ENST00000512844 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
CHD1-209ENST00000512844 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
CHD1-209ENST00000512844 REPIN1Q9BWE0 567 aaKnown RBP11.83□□□□□ -0.52
CHD1-209ENST00000512844 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
CHD1-209ENST00000512844 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
CHD1-209ENST00000512844 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
CHD1-209ENST00000512844 CD46P15529 392 aa11.81□□□□□ -0.52
CHD1-209ENST00000512844 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
CHD1-209ENST00000512844 SLC10A3P09131 477 aa11.79□□□□□ -0.52
CHD1-209ENST00000512844 DIXDC1Q155Q3 683 aa11.79□□□□□ -0.52
CHD1-209ENST00000512844 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
CHD1-209ENST00000512844 MS4A1P11836 297 aa11.78□□□□□ -0.52
CHD1-209ENST00000512844 GCGRP47871 477 aa11.77□□□□□ -0.53
CHD1-209ENST00000512844 KDM4AO75164 1064 aa11.75□□□□□ -0.53
CHD1-209ENST00000512844 USP46P62068 366 aa11.75□□□□□ -0.53
CHD1-209ENST00000512844 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
CHD1-209ENST00000512844 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
CHD1-209ENST00000512844 PCDHB3Q9Y5E6 796 aa11.74□□□□□ -0.53
CHD1-209ENST00000512844 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
CHD1-209ENST00000512844 APLP1P51693 650 aa11.73□□□□□ -0.53
CHD1-209ENST00000512844 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
CHD1-209ENST00000512844 IL27Q8NEV9 243 aa11.71□□□□□ -0.53
CHD1-209ENST00000512844 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
CHD1-209ENST00000512844 FUT2Q10981 343 aa11.7□□□□□ -0.54
CHD1-209ENST00000512844 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
CHD1-209ENST00000512844 NR1I2O75469 434 aa11.68□□□□□ -0.54
CHD1-209ENST00000512844 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
CHD1-209ENST00000512844 HOXA2O43364 376 aa11.66□□□□□ -0.54
CHD1-209ENST00000512844 COPS2P61201 443 aa11.66□□□□□ -0.54
CHD1-209ENST00000512844 PUS10Q3MIT2 529 aaKnown RBP11.65□□□□□ -0.54
CHD1-209ENST00000512844 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
CHD1-209ENST00000512844 Q3C1V9 767 aa11.63□□□□□ -0.55
CHD1-209ENST00000512844 BLOC1S3Q6QNY0 202 aa11.63□□□□□ -0.55
CHD1-209ENST00000512844 MTRQ99707 1265 aa11.63□□□□□ -0.55
CHD1-209ENST00000512844 FDX1P10109 184 aa11.62□□□□□ -0.55
CHD1-209ENST00000512844 PLEKHG3A1L390 1219 aa11.61□□□□□ -0.55
CHD1-209ENST00000512844 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
CHD1-209ENST00000512844 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
CHD1-209ENST00000512844 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
CHD1-209ENST00000512844 MORN1Q5T089 497 aa11.61□□□□□ -0.55
CHD1-209ENST00000512844 MYSM1Q5VVJ2 828 aa11.61□□□□□ -0.55
CHD1-209ENST00000512844 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
CHD1-209ENST00000512844 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
CHD1-209ENST00000512844 KCNC4Q03721 635 aa11.6□□□□□ -0.55
CHD1-209ENST00000512844 POLR3EQ9NVU0 708 aa11.6□□□□□ -0.55
CHD1-209ENST00000512844 NDUFV2P19404 249 aa11.59□□□□□ -0.55
CHD1-209ENST00000512844 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
CHD1-209ENST00000512844 GJA5P36382 358 aa11.58□□□□□ -0.56
CHD1-209ENST00000512844 RSBN1LQ6PCB5 846 aaPredicted RBP11.58□□□□□ -0.56
CHD1-209ENST00000512844 SCUBE3Q8IX30 993 aa11.58□□□□□ -0.56
CHD1-209ENST00000512844 SLC27A5Q9Y2P5 690 aa11.58□□□□□ -0.56
CHD1-209ENST00000512844 SPTLC1O15269 473 aa11.57□□□□□ -0.56
CHD1-209ENST00000512844 ZPR1O75312 459 aa11.57□□□□□ -0.56
CHD1-209ENST00000512844 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
CHD1-209ENST00000512844 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
CHD1-209ENST00000512844 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
CHD1-209ENST00000512844 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
CHD1-209ENST00000512844 GUCA2AQ02747 115 aa11.56□□□□□ -0.56
CHD1-209ENST00000512844 TMEM132AQ24JP5 1023 aa11.56□□□□□ -0.56
CHD1-209ENST00000512844 TJAP1Q5JTD0 557 aa11.56□□□□□ -0.56
CHD1-209ENST00000512844 HLA-CQ95604 372 aa11.56□□□□□ -0.56
CHD1-209ENST00000512844 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
CHD1-209ENST00000512844 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
CHD1-209ENST00000512844 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms