RNA–Protein interactions for RNA: ENST00000512797.5

RPS3A-211, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-211ENST00000512797 SLC4A3P48751 1232 aa11.52□□□□□ -0.57
RPS3A-211ENST00000512797 IL21Q9HBE4 155 aa11.52□□□□□ -0.57
RPS3A-211ENST00000512797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
RPS3A-211ENST00000512797 METTL3Q86U44 580 aaKnown RBP11.51□□□□□ -0.57
RPS3A-211ENST00000512797 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
RPS3A-211ENST00000512797 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
RPS3A-211ENST00000512797 RGS20O76081 388 aa11.5□□□□□ -0.57
RPS3A-211ENST00000512797 SLC10A3P09131 477 aa11.49□□□□□ -0.57
RPS3A-211ENST00000512797 COPS2P61201 443 aa11.48□□□□□ -0.57
RPS3A-211ENST00000512797 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
RPS3A-211ENST00000512797 NLRP7Q8WX94 980 aa11.47□□□□□ -0.57
RPS3A-211ENST00000512797 PHOX2BQ99453 314 aa11.45□□□□□ -0.58
RPS3A-211ENST00000512797 PCDHB3Q9Y5E6 796 aa11.44□□□□□ -0.58
RPS3A-211ENST00000512797 CFHP08603 1231 aa11.43□□□□□ -0.58
RPS3A-211ENST00000512797 PRR14Q9BWN1 585 aa11.43□□□□□ -0.58
RPS3A-211ENST00000512797 TULP1O00294 542 aaPredicted RBP11.42□□□□□ -0.58
RPS3A-211ENST00000512797 ACTN4O43707 911 aaKnown RBP11.42□□□□□ -0.58
RPS3A-211ENST00000512797 ZPR1O75312 459 aa11.42□□□□□ -0.58
RPS3A-211ENST00000512797 PPP1R18Q6NYC8 613 aa11.42□□□□□ -0.58
RPS3A-211ENST00000512797 BLOC1S3Q6QNY0 202 aa11.42□□□□□ -0.58
RPS3A-211ENST00000512797 DAXXQ9UER7 740 aaPredicted RBP11.41□□□□□ -0.58
RPS3A-211ENST00000512797 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
RPS3A-211ENST00000512797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPS3A-211ENST00000512797 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
RPS3A-211ENST00000512797 DDX11L8A8MPP1 907 aa11.36□□□□□ -0.59
RPS3A-211ENST00000512797 RSPH4AQ5TD94 716 aa11.36□□□□□ -0.59
RPS3A-211ENST00000512797 IRF6O14896 467 aa11.35□□□□□ -0.59
RPS3A-211ENST00000512797 MAP2K5Q13163 448 aa11.35□□□□□ -0.59
RPS3A-211ENST00000512797 RDH13Q8NBN7 331 aa11.35□□□□□ -0.59
RPS3A-211ENST00000512797 TLL1O43897 1013 aa11.33□□□□□ -0.6
RPS3A-211ENST00000512797 PUS10Q3MIT2 529 aaKnown RBP11.33□□□□□ -0.6
RPS3A-211ENST00000512797 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
RPS3A-211ENST00000512797 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
RPS3A-211ENST00000512797 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
RPS3A-211ENST00000512797 SCUBE3Q8IX30 993 aa11.31□□□□□ -0.6
RPS3A-211ENST00000512797 PRKD2Q9BZL6 878 aa11.31□□□□□ -0.6
RPS3A-211ENST00000512797 NR1I2O75469 434 aa11.29□□□□□ -0.6
RPS3A-211ENST00000512797 GCGRP47871 477 aa11.29□□□□□ -0.6
RPS3A-211ENST00000512797 GGCXP38435 758 aa11.28□□□□□ -0.6
RPS3A-211ENST00000512797 FUT2Q10981 343 aa11.27□□□□□ -0.61
RPS3A-211ENST00000512797 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
RPS3A-211ENST00000512797 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
RPS3A-211ENST00000512797 TMUB1Q9BVT8 246 aa11.27□□□□□ -0.61
RPS3A-211ENST00000512797 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
RPS3A-211ENST00000512797 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
RPS3A-211ENST00000512797 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
RPS3A-211ENST00000512797 S1PR4O95977 384 aa11.24□□□□□ -0.61
RPS3A-211ENST00000512797 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
RPS3A-211ENST00000512797 MORN1Q5T089 497 aa11.24□□□□□ -0.61
RPS3A-211ENST00000512797 ADH1BP00325 375 aa11.23□□□□□ -0.61
RPS3A-211ENST00000512797 V9GY48 417 aaPredicted RBP11.23□□□□□ -0.61
RPS3A-211ENST00000512797 CD46P15529 392 aa11.22□□□□□ -0.61
RPS3A-211ENST00000512797 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
RPS3A-211ENST00000512797 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
RPS3A-211ENST00000512797 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
RPS3A-211ENST00000512797 ZMYND10O75800 440 aa11.21□□□□□ -0.61
RPS3A-211ENST00000512797 BARGINQ6ZT62 677 aa11.21□□□□□ -0.61
RPS3A-211ENST00000512797 SPSB2Q99619 263 aa11.21□□□□□ -0.61
RPS3A-211ENST00000512797 SLC27A5Q9Y2P5 690 aa11.21□□□□□ -0.61
RPS3A-211ENST00000512797 SLC6A16Q9GZN6 736 aa11.2□□□□□ -0.62
RPS3A-211ENST00000512797 THAP11Q96EK4 314 aa11.19□□□□□ -0.62
RPS3A-211ENST00000512797 GFRA3O60609 400 aa11.18□□□□□ -0.62
RPS3A-211ENST00000512797 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
RPS3A-211ENST00000512797 REPIN1Q9BWE0 567 aaKnown RBP11.18□□□□□ -0.62
RPS3A-211ENST00000512797 SLC19A1P41440 591 aa11.17□□□□□ -0.62
RPS3A-211ENST00000512797 FAM160A2Q8N612 972 aaPredicted RBP11.16□□□□□ -0.62
RPS3A-211ENST00000512797 GPCPD1Q9NPB8 672 aa11.16□□□□□ -0.62
RPS3A-211ENST00000512797 CLCN1P35523 988 aa11.15□□□□□ -0.62
RPS3A-211ENST00000512797 BRICD5Q6PL45 260 aa11.15□□□□□ -0.62
RPS3A-211ENST00000512797 LIAT1Q6ZQX7 453 aa11.15□□□□□ -0.62
RPS3A-211ENST00000512797 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
RPS3A-211ENST00000512797 KDM4AO75164 1064 aa11.14□□□□□ -0.63
RPS3A-211ENST00000512797 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
RPS3A-211ENST00000512797 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
RPS3A-211ENST00000512797 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
RPS3A-211ENST00000512797 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
RPS3A-211ENST00000512797 Q6ZNB5 142 aa11.13□□□□□ -0.63
RPS3A-211ENST00000512797 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
RPS3A-211ENST00000512797 HLA-CQ95604 372 aa11.12□□□□□ -0.63
RPS3A-211ENST00000512797 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
RPS3A-211ENST00000512797 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
RPS3A-211ENST00000512797 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
RPS3A-211ENST00000512797 PRDM9Q9NQV7 894 aa11.09□□□□□ -0.63
RPS3A-211ENST00000512797 PDZRN3Q9UPQ7 1066 aa11.09□□□□□ -0.63
RPS3A-211ENST00000512797 TRIM67Q6ZTA4 783 aa11.08□□□□□ -0.64
RPS3A-211ENST00000512797 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
RPS3A-211ENST00000512797 NRG2O14511 850 aaPredicted RBP11.07□□□□□ -0.64
RPS3A-211ENST00000512797 LCE2BO14633 110 aa11.06□□□□□ -0.64
RPS3A-211ENST00000512797 HOXA2O43364 376 aa11.06□□□□□ -0.64
RPS3A-211ENST00000512797 USP46P62068 366 aa11.06□□□□□ -0.64
RPS3A-211ENST00000512797 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
RPS3A-211ENST00000512797 Q3C1V9 767 aa11.06□□□□□ -0.64
RPS3A-211ENST00000512797 TTLL12Q14166 644 aaPredicted RBP11.05□□□□□ -0.64
RPS3A-211ENST00000512797 AMHR2Q16671 573 aa11.05□□□□□ -0.64
RPS3A-211ENST00000512797 FCF1Q9Y324 198 aaKnown RBP11.05□□□□□ -0.64
RPS3A-211ENST00000512797 TRIM66O15016 1216 aa11.04□□□□□ -0.64
RPS3A-211ENST00000512797 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
RPS3A-211ENST00000512797 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
RPS3A-211ENST00000512797 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
RPS3A-211ENST00000512797 USB1Q9BQ65 265 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms