RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
TRIO-219ENST00000512303 C3P01024 1663 aa10.99□□□□□ -0.65
TRIO-219ENST00000512303 PIP4K2BP78356 416 aa10.99□□□□□ -0.65
TRIO-219ENST00000512303 FBXO22Q8NEZ5 403 aa10.99□□□□□ -0.65
TRIO-219ENST00000512303 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
TRIO-219ENST00000512303 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
TRIO-219ENST00000512303 KIF14Q15058 1648 aa10.98□□□□□ -0.65
TRIO-219ENST00000512303 MYO5CQ9NQX4 1742 aa10.97□□□□□ -0.65
TRIO-219ENST00000512303 CDK13Q14004 1512 aaKnown RBP10.96□□□□□ -0.65
TRIO-219ENST00000512303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRIO-219ENST00000512303 IER5LQ5T953 404 aa10.95□□□□□ -0.66
TRIO-219ENST00000512303 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
TRIO-219ENST00000512303 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
TRIO-219ENST00000512303 MROH2AA6NES4 1674 aa10.95□□□□□ -0.66
TRIO-219ENST00000512303 SPAG9O60271 1321 aaKnown RBP10.93□□□□□ -0.66
TRIO-219ENST00000512303 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
TRIO-219ENST00000512303 MS4A4AQ96JQ5 239 aa10.93□□□□□ -0.66
TRIO-219ENST00000512303 CEP170BQ9Y4F5 1589 aaPredicted RBP10.93□□□□□ -0.66
TRIO-219ENST00000512303 SHANK2Q9UPX8 1470 aa10.93□□□□□ -0.66
TRIO-219ENST00000512303 ABCA6Q8N139 1617 aa10.92□□□□□ -0.66
TRIO-219ENST00000512303 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
TRIO-219ENST00000512303 ABCC1P33527 1531 aa10.91□□□□□ -0.66
TRIO-219ENST00000512303 PPP1R37O75864 691 aa10.91□□□□□ -0.66
TRIO-219ENST00000512303 THEMISQ8N1K5 641 aaPredicted RBP10.91□□□□□ -0.66
TRIO-219ENST00000512303 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
TRIO-219ENST00000512303 ZNF142P52746 1687 aaPredicted RBP10.9□□□□□ -0.66
TRIO-219ENST00000512303 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
TRIO-219ENST00000512303 SLC39A7Q92504 469 aa10.9□□□□□ -0.66
TRIO-219ENST00000512303 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
TRIO-219ENST00000512303 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
TRIO-219ENST00000512303 PLEKHH2Q8IVE3 1493 aa10.88□□□□□ -0.67
TRIO-219ENST00000512303 C7P10643 843 aa10.88□□□□□ -0.67
TRIO-219ENST00000512303 GGT6Q6P531 493 aa10.88□□□□□ -0.67
TRIO-219ENST00000512303 KIAA1107Q9UPP5 1409 aa10.88□□□□□ -0.67
TRIO-219ENST00000512303 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
TRIO-219ENST00000512303 LOC105371045A0A1W2PR82 267 aa10.87□□□□□ -0.67
TRIO-219ENST00000512303 A2MP01023 1474 aa10.87□□□□□ -0.67
TRIO-219ENST00000512303 CCDC18Q5T9S5 1454 aa10.87□□□□□ -0.67
TRIO-219ENST00000512303 SEC24BO95487 1268 aa10.86□□□□□ -0.67
TRIO-219ENST00000512303 PLCG2P16885 1265 aa10.86□□□□□ -0.67
TRIO-219ENST00000512303 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
TRIO-219ENST00000512303 UBTFP17480 764 aaKnown RBP10.85□□□□□ -0.67
TRIO-219ENST00000512303 TNRQ92752 1358 aa10.85□□□□□ -0.67
TRIO-219ENST00000512303 FAM135AQ9P2D6 1515 aa10.84□□□□□ -0.67
TRIO-219ENST00000512303 DPY19L2Q6NUT2 758 aa10.84□□□□□ -0.67
TRIO-219ENST00000512303 KIDINS220Q9ULH0 1771 aa10.84□□□□□ -0.67
TRIO-219ENST00000512303 PREX2Q70Z35 1606 aa10.84□□□□□ -0.67
TRIO-219ENST00000512303 SAMD9LQ8IVG5 1584 aa10.83□□□□□ -0.68
TRIO-219ENST00000512303 MED14O60244 1454 aa10.83□□□□□ -0.68
TRIO-219ENST00000512303 NLRP1Q9C000 1473 aa10.83□□□□□ -0.68
TRIO-219ENST00000512303 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
TRIO-219ENST00000512303 ZNF777Q9ULD5 760 aaPredicted RBP10.83□□□□□ -0.68
TRIO-219ENST00000512303 COLQQ9Y215 455 aaPredicted RBP10.83□□□□□ -0.68
TRIO-219ENST00000512303 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
TRIO-219ENST00000512303 ATP7AQ04656 1500 aa10.82□□□□□ -0.68
TRIO-219ENST00000512303 NPHP4O75161 1426 aaPredicted RBP10.82□□□□□ -0.68
TRIO-219ENST00000512303 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
TRIO-219ENST00000512303 DNMT1P26358 1616 aaKnown RBP10.81□□□□□ -0.68
TRIO-219ENST00000512303 CFDP1Q9UEE9 299 aaPredicted RBP10.81□□□□□ -0.68
TRIO-219ENST00000512303 KDM2AQ9Y2K7 1162 aa10.81□□□□□ -0.68
TRIO-219ENST00000512303 WASHC2CQ9Y4E1 1318 aa10.8□□□□□ -0.68
TRIO-219ENST00000512303 PZPP20742 1482 aa10.8□□□□□ -0.68
TRIO-219ENST00000512303 ARHGAP35Q9NRY4 1499 aa10.8□□□□□ -0.68
TRIO-219ENST00000512303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRIO-219ENST00000512303 CDC42BPBQ9Y5S2 1711 aa10.79□□□□□ -0.68
TRIO-219ENST00000512303 RTEL1-TNFRSF6BF6WH68 1400 aa10.79□□□□□ -0.68
TRIO-219ENST00000512303 CASKIN1Q8WXD9 1431 aa10.79□□□□□ -0.68
TRIO-219ENST00000512303 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
TRIO-219ENST00000512303 HNRNPMP52272 730 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRIO-219ENST00000512303 RGS17Q9UGC6 210 aaPredicted RBP10.79□□□□□ -0.68
TRIO-219ENST00000512303 CLTCQ00610 1675 aaKnown RBP10.79□□□□□ -0.68
TRIO-219ENST00000512303 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
TRIO-219ENST00000512303 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
TRIO-219ENST00000512303 MIA2Q96PC5 1412 aa10.78□□□□□ -0.68
TRIO-219ENST00000512303 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
TRIO-219ENST00000512303 L3MBTL3Q96JM7 780 aaPredicted RBP10.78□□□□□ -0.68
TRIO-219ENST00000512303 SYCP2Q9BX26 1530 aa10.78□□□□□ -0.68
TRIO-219ENST00000512303 SYNMO15061 1565 aa10.77□□□□□ -0.68
TRIO-219ENST00000512303 VWDEQ8N2E2 1590 aa10.77□□□□□ -0.68
TRIO-219ENST00000512303 NEURL4Q96JN8 1562 aa10.77□□□□□ -0.68
TRIO-219ENST00000512303 DEPDC5O75140 1603 aa10.77□□□□□ -0.68
TRIO-219ENST00000512303 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
TRIO-219ENST00000512303 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.68
TRIO-219ENST00000512303 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.69
TRIO-219ENST00000512303 GPATCH8Q9UKJ3 1502 aaKnown RBP10.77□□□□□ -0.69
TRIO-219ENST00000512303 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.69
TRIO-219ENST00000512303 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.69
TRIO-219ENST00000512303 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
TRIO-219ENST00000512303 G3V3G9 751 aa10.76□□□□□ -0.69
TRIO-219ENST00000512303 BOLA1Q9Y3E2 137 aa10.76□□□□□ -0.69
TRIO-219ENST00000512303 INO80Q9ULG1 1556 aaPredicted RBP10.75□□□□□ -0.69
TRIO-219ENST00000512303 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
TRIO-219ENST00000512303 KDM5DQ9BY66 1539 aa10.74□□□□□ -0.69
TRIO-219ENST00000512303 KIF3BO15066 747 aa10.74□□□□□ -0.69
TRIO-219ENST00000512303 FBXO31Q5XUX0 539 aaPredicted RBP10.74□□□□□ -0.69
TRIO-219ENST00000512303 MICALL2Q8IY33 904 aa10.74□□□□□ -0.69
TRIO-219ENST00000512303 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
TRIO-219ENST00000512303 POTEAQ6S8J7 498 aa10.73□□□□□ -0.69
TRIO-219ENST00000512303 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
TRIO-219ENST00000512303 FYCO1Q9BQS8 1478 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms