RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 CPS1P31327 1500 aa14.75□□□□□ -0.05
SUB1-210ENST00000511988 KDM5AP29375 1690 aaKnown RBP14.74□□□□□ -0.05
SUB1-210ENST00000511988 TONSLQ96HA7 1378 aa14.74□□□□□ -0.05
SUB1-210ENST00000511988 SIN3AQ96ST3 1273 aa14.73□□□□□ -0.05
SUB1-210ENST00000511988 NEUROD1Q13562 356 aa14.72□□□□□ -0.05
SUB1-210ENST00000511988 MYO3AQ8NEV4 1616 aa14.72□□□□□ -0.05
SUB1-210ENST00000511988 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
SUB1-210ENST00000511988 TNRQ92752 1358 aa14.72□□□□□ -0.05
SUB1-210ENST00000511988 NLRP1Q9C000 1473 aa14.71□□□□□ -0.05
SUB1-210ENST00000511988 SLC52A1Q9NWF4 448 aa14.71□□□□□ -0.05
SUB1-210ENST00000511988 IFT172Q9UG01 1749 aa14.7□□□□□ -0.06
SUB1-210ENST00000511988 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
SUB1-210ENST00000511988 ZNF142P52746 1687 aaPredicted RBP14.69□□□□□ -0.06
SUB1-210ENST00000511988 FBXO31Q5XUX0 539 aaPredicted RBP14.68□□□□□ -0.06
SUB1-210ENST00000511988 UPF1Q92900 1129 aaKnown RBP eCLIP14.68□□□□□ -0.06
SUB1-210ENST00000511988 MYO5BQ9ULV0 1848 aa14.68□□□□□ -0.06
SUB1-210ENST00000511988 CEP170BQ9Y4F5 1589 aaPredicted RBP14.67□□□□□ -0.06
SUB1-210ENST00000511988 UBR1Q8IWV7 1749 aa14.66□□□□□ -0.06
SUB1-210ENST00000511988 PPLO60437 1756 aa14.66□□□□□ -0.06
SUB1-210ENST00000511988 MYOM2P54296 1465 aa14.65□□□□□ -0.06
SUB1-210ENST00000511988 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
SUB1-210ENST00000511988 NEXMIFQ5QGS0 1516 aa14.63□□□□□ -0.07
SUB1-210ENST00000511988 IDI1Q13907 227 aa14.63□□□□□ -0.07
SUB1-210ENST00000511988 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
SUB1-210ENST00000511988 STAC3Q96MF2 364 aa14.62□□□□□ -0.07
SUB1-210ENST00000511988 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
SUB1-210ENST00000511988 RPGRIP1LQ68CZ1 1315 aa14.6□□□□□ -0.07
SUB1-210ENST00000511988 KIAA1210Q9ULL0 1709 aa14.59□□□□□ -0.07
SUB1-210ENST00000511988 CHGAP10645 457 aaKnown RBP14.59□□□□□ -0.07
SUB1-210ENST00000511988 LAMC1P11047 1609 aa14.59□□□□□ -0.07
SUB1-210ENST00000511988 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.07
SUB1-210ENST00000511988 NRXN1Q9ULB1 1477 aa14.58□□□□□ -0.08
SUB1-210ENST00000511988 RGL3Q3MIN7 710 aa14.58□□□□□ -0.08
SUB1-210ENST00000511988 STAG3Q9UJ98 1225 aa14.58□□□□□ -0.08
SUB1-210ENST00000511988 TRPM1Q7Z4N2 1603 aa14.58□□□□□ -0.08
SUB1-210ENST00000511988 ZFYVE9O95405 1425 aa14.58□□□□□ -0.08
SUB1-210ENST00000511988 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
SUB1-210ENST00000511988 SLIT1O75093 1534 aa14.57□□□□□ -0.08
SUB1-210ENST00000511988 PPP1R15AO75807 674 aaPredicted RBP14.57□□□□□ -0.08
SUB1-210ENST00000511988 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
SUB1-210ENST00000511988 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
SUB1-210ENST00000511988 DCAF11Q8TEB1 546 aa14.56□□□□□ -0.08
SUB1-210ENST00000511988 ARHGAP23Q9P227 1491 aa14.56□□□□□ -0.08
SUB1-210ENST00000511988 MSH5O43196 834 aa14.55□□□□□ -0.08
SUB1-210ENST00000511988 RIMS2Q9UQ26 1411 aa14.55□□□□□ -0.08
SUB1-210ENST00000511988 TMEM2Q9UHN6 1383 aa14.54□□□□□ -0.08
SUB1-210ENST00000511988 PIK3C2GO75747 1445 aa14.54□□□□□ -0.08
SUB1-210ENST00000511988 LRRC7Q96NW7 1537 aa14.54□□□□□ -0.08
SUB1-210ENST00000511988 POLR1AO95602 1720 aaPredicted RBP14.52□□□□□ -0.08
SUB1-210ENST00000511988 SETBP1Q9Y6X0 1596 aa14.51□□□□□ -0.09
SUB1-210ENST00000511988 VGFO15240 615 aaPredicted RBP14.51□□□□□ -0.09
SUB1-210ENST00000511988 THEMISQ8N1K5 641 aaPredicted RBP14.51□□□□□ -0.09
SUB1-210ENST00000511988 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.51□□□□□ -0.09
SUB1-210ENST00000511988 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
SUB1-210ENST00000511988 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
SUB1-210ENST00000511988 SCAF11Q99590 1463 aaKnown RBP14.5□□□□□ -0.09
SUB1-210ENST00000511988 IQGAP1P46940 1657 aa14.49□□□□□ -0.09
SUB1-210ENST00000511988 NPHP4O75161 1426 aaPredicted RBP14.49□□□□□ -0.09
SUB1-210ENST00000511988 NRXN3Q9Y4C0 1643 aa14.48□□□□□ -0.09
SUB1-210ENST00000511988 DIP2AQ14689 1571 aa14.48□□□□□ -0.09
SUB1-210ENST00000511988 ADRA2BP18089 450 aa14.48□□□□□ -0.09
SUB1-210ENST00000511988 NBPF8Q3BBV2 869 aa14.48□□□□□ -0.09
SUB1-210ENST00000511988 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
SUB1-210ENST00000511988 GPRASP1Q5JY77 1395 aa14.47□□□□□ -0.09
SUB1-210ENST00000511988 ADGRF5Q8IZF2 1346 aa14.47□□□□□ -0.09
SUB1-210ENST00000511988 ROCK2O75116 1388 aaKnown RBP14.47□□□□□ -0.09
SUB1-210ENST00000511988 PLEKHG1Q9ULL1 1385 aa14.47□□□□□ -0.09
SUB1-210ENST00000511988 EID1Q9Y6B2 187 aa14.46□□□□□ -0.09
SUB1-210ENST00000511988 STRCP1A6NGW2 1772 aa14.45□□□□□ -0.1
SUB1-210ENST00000511988 ADGRB1O14514 1584 aa14.44□□□□□ -0.1
SUB1-210ENST00000511988 ASXL1Q8IXJ9 1541 aa14.43□□□□□ -0.1
SUB1-210ENST00000511988 FAM135BQ49AJ0 1406 aa14.42□□□□□ -0.1
SUB1-210ENST00000511988 MED14O60244 1454 aa14.42□□□□□ -0.1
SUB1-210ENST00000511988 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
SUB1-210ENST00000511988 NUTM2DQ5VT03 806 aaPredicted RBP14.41□□□□□ -0.1
SUB1-210ENST00000511988 TXNDC2Q86VQ3 553 aa14.41□□□□□ -0.1
SUB1-210ENST00000511988 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
SUB1-210ENST00000511988 ADAMTS13Q76LX8 1427 aa14.4□□□□□ -0.1
SUB1-210ENST00000511988 EIF3AQ14152 1382 aaKnown RBP14.39□□□□□ -0.11
SUB1-210ENST00000511988 USP47Q96K76 1375 aa14.39□□□□□ -0.11
SUB1-210ENST00000511988 ARHGEF28Q8N1W1 1705 aaKnown RBP14.39□□□□□ -0.11
SUB1-210ENST00000511988 LTKP29376 864 aa14.39□□□□□ -0.11
SUB1-210ENST00000511988 CARD11Q9BXL7 1154 aa14.39□□□□□ -0.11
SUB1-210ENST00000511988 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
SUB1-210ENST00000511988 ZNF772Q68DY9 489 aaPredicted RBP14.38□□□□□ -0.11
SUB1-210ENST00000511988 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
SUB1-210ENST00000511988 RXRBP28702 533 aa14.36□□□□□ -0.11
SUB1-210ENST00000511988 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
SUB1-210ENST00000511988 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
SUB1-210ENST00000511988 MEX3CQ5U5Q3 659 aaKnown RBP14.36□□□□□ -0.11
SUB1-210ENST00000511988 YTHDC2Q9H6S0 1430 aaKnown RBP14.35□□□□□ -0.11
SUB1-210ENST00000511988 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
SUB1-210ENST00000511988 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
SUB1-210ENST00000511988 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
SUB1-210ENST00000511988 JCADQ9P266 1359 aa14.34□□□□□ -0.11
SUB1-210ENST00000511988 TECPR2O15040 1411 aa14.34□□□□□ -0.11
SUB1-210ENST00000511988 QRICH2Q9H0J4 1663 aa14.34□□□□□ -0.11
SUB1-210ENST00000511988 BCANQ96GW7 911 aa14.34□□□□□ -0.11
SUB1-210ENST00000511988 LRPPRCP42704 1394 aaKnown RBP14.34□□□□□ -0.11
SUB1-210ENST00000511988 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms