RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 STRCP1A6NGW2 1772 aa9□□□□□ -0.97
RNF4-217ENST00000511892 CLEC11AQ9Y240 323 aa9□□□□□ -0.97
RNF4-217ENST00000511892 MYO5BQ9ULV0 1848 aa9□□□□□ -0.97
RNF4-217ENST00000511892 UNC13BO14795 1591 aa8.99□□□□□ -0.97
RNF4-217ENST00000511892 SYNMO15061 1565 aa8.99□□□□□ -0.97
RNF4-217ENST00000511892 EVX2Q03828 476 aa8.99□□□□□ -0.97
RNF4-217ENST00000511892 THEMISQ8N1K5 641 aaPredicted RBP8.99□□□□□ -0.97
RNF4-217ENST00000511892 MED14O60244 1454 aa8.99□□□□□ -0.97
RNF4-217ENST00000511892 IQSEC2Q5JU85 1478 aa8.99□□□□□ -0.97
RNF4-217ENST00000511892 KDM5AP29375 1690 aaKnown RBP8.99□□□□□ -0.97
RNF4-217ENST00000511892 GCC2Q8IWJ2 1684 aa8.99□□□□□ -0.97
RNF4-217ENST00000511892 EFCAB6Q5THR3 1501 aa8.99□□□□□ -0.97
RNF4-217ENST00000511892 ANKRD50Q9ULJ7 1429 aa8.98□□□□□ -0.97
RNF4-217ENST00000511892 TET3O43151 1660 aa8.98□□□□□ -0.97
RNF4-217ENST00000511892 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
RNF4-217ENST00000511892 KANK1Q14678 1352 aa8.98□□□□□ -0.97
RNF4-217ENST00000511892 E9PCH4 1651 aa8.97□□□□□ -0.97
RNF4-217ENST00000511892 ROCK1Q13464 1354 aa8.97□□□□□ -0.97
RNF4-217ENST00000511892 NPHP4O75161 1426 aaPredicted RBP8.97□□□□□ -0.97
RNF4-217ENST00000511892 ARHGAP23Q9P227 1491 aa8.96□□□□□ -0.97
RNF4-217ENST00000511892 SLIT1O75093 1534 aa8.96□□□□□ -0.97
RNF4-217ENST00000511892 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
RNF4-217ENST00000511892 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
RNF4-217ENST00000511892 SPDYE2Q495Y8 402 aa8.96□□□□□ -0.98
RNF4-217ENST00000511892 NOS1P29475 1434 aa8.96□□□□□ -0.98
RNF4-217ENST00000511892 IQGAP3Q86VI3 1631 aa8.95□□□□□ -0.98
RNF4-217ENST00000511892 MKRN4PQ13434 485 aaPredicted RBP8.95□□□□□ -0.98
RNF4-217ENST00000511892 XIRP1Q702N8 1843 aaKnown RBP8.94□□□□□ -0.98
RNF4-217ENST00000511892 LTKP29376 864 aa8.94□□□□□ -0.98
RNF4-217ENST00000511892 IDI1Q13907 227 aa8.94□□□□□ -0.98
RNF4-217ENST00000511892 RPRD2Q5VT52 1461 aaKnown RBP8.94□□□□□ -0.98
RNF4-217ENST00000511892 SCAF11Q99590 1463 aaKnown RBP8.94□□□□□ -0.98
RNF4-217ENST00000511892 CPS1P31327 1500 aa8.94□□□□□ -0.98
RNF4-217ENST00000511892 ITGAEP38570 1179 aa8.93□□□□□ -0.98
RNF4-217ENST00000511892 ZNF692Q9BU19 519 aaPredicted RBP8.93□□□□□ -0.98
RNF4-217ENST00000511892 RRBP1Q9P2E9 1410 aaKnown RBP8.93□□□□□ -0.98
RNF4-217ENST00000511892 ADGRB3O60242 1522 aa8.93□□□□□ -0.98
RNF4-217ENST00000511892 TMEM131LA2VDJ0 1609 aa8.92□□□□□ -0.98
RNF4-217ENST00000511892 PRKAR2AP13861 404 aaKnown RBP8.92□□□□□ -0.98
RNF4-217ENST00000511892 ALKQ9UM73 1620 aa8.91□□□□□ -0.98
RNF4-217ENST00000511892 TMEM2Q9UHN6 1383 aa8.91□□□□□ -0.98
RNF4-217ENST00000511892 TXNDC2Q86VQ3 553 aa8.91□□□□□ -0.98
RNF4-217ENST00000511892 SPHKAPQ2M3C7 1700 aa8.9□□□□□ -0.98
RNF4-217ENST00000511892 LRRC7Q96NW7 1537 aa8.9□□□□□ -0.99
RNF4-217ENST00000511892 UBAP1LF5GYI3 381 aa8.89□□□□□ -0.99
RNF4-217ENST00000511892 SLC52A1Q9NWF4 448 aa8.89□□□□□ -0.99
RNF4-217ENST00000511892 CHD2O14647 1828 aaKnown RBP8.89□□□□□ -0.99
RNF4-217ENST00000511892 NUP155O75694 1391 aa8.88□□□□□ -0.99
RNF4-217ENST00000511892 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
RNF4-217ENST00000511892 EID1Q9Y6B2 187 aa8.88□□□□□ -0.99
RNF4-217ENST00000511892 ZFYVE9O95405 1425 aa8.88□□□□□ -0.99
RNF4-217ENST00000511892 SPDYE1Q8NFV5 336 aaPredicted RBP8.87□□□□□ -0.99
RNF4-217ENST00000511892 NAIPQ13075 1403 aa8.87□□□□□ -0.99
RNF4-217ENST00000511892 KIF1BO60333 1816 aa8.85□□□□□ -0.99
RNF4-217ENST00000511892 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
RNF4-217ENST00000511892 RIMS2Q9UQ26 1411 aa8.85□□□□□ -0.99
RNF4-217ENST00000511892 NWD1Q149M9 1564 aa8.85□□□□□ -0.99
RNF4-217ENST00000511892 CLTCL1P53675 1640 aa8.84□□□□□ -0.99
RNF4-217ENST00000511892 TOM1O60784 492 aa8.84□□□□□ -0.99
RNF4-217ENST00000511892 SLC26A8Q96RN1 970 aa8.84□□□□□ -0.99
RNF4-217ENST00000511892 HFM1A2PYH4 1435 aa8.83□□□□□ -1
RNF4-217ENST00000511892 PIP4K2BP78356 416 aa8.83□□□□□ -1
RNF4-217ENST00000511892 PLEKHG1Q9ULL1 1385 aa8.83□□□□□ -1
RNF4-217ENST00000511892 CHGAP10645 457 aaKnown RBP8.82□□□□□ -1
RNF4-217ENST00000511892 KCNA6P17658 529 aa8.82□□□□□ -1
RNF4-217ENST00000511892 HSPA1LP34931 641 aa8.82□□□□□ -1
RNF4-217ENST00000511892 NRXN3Q9Y4C0 1643 aa8.82□□□□□ -1
RNF4-217ENST00000511892 TRPM2O94759 1503 aa8.81□□□□□ -1
RNF4-217ENST00000511892 NUTM2DQ5VT03 806 aaPredicted RBP8.81□□□□□ -1
RNF4-217ENST00000511892 SSUH2Q9Y2M2 353 aa8.81□□□□□ -1
RNF4-217ENST00000511892 ADAMTS13Q76LX8 1427 aa8.8□□□□□ -1
RNF4-217ENST00000511892 TMEM94Q12767 1356 aa8.8□□□□□ -1
RNF4-217ENST00000511892 DISP3Q9P2K9 1392 aa8.8□□□□□ -1
RNF4-217ENST00000511892 NKTRP30414 1462 aaKnown RBP8.8□□□□□ -1
RNF4-217ENST00000511892 DIP2AQ14689 1571 aa8.8□□□□□ -1
RNF4-217ENST00000511892 PPP1R15AO75807 674 aaPredicted RBP8.79□□□□□ -1
RNF4-217ENST00000511892 HDGFP51858 240 aaKnown RBP8.79□□□□□ -1
RNF4-217ENST00000511892 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.79□□□□□ -1
RNF4-217ENST00000511892 RBM33Q96EV2 1170 aaKnown RBP8.79□□□□□ -1
RNF4-217ENST00000511892 BCANQ96GW7 911 aa8.79□□□□□ -1
RNF4-217ENST00000511892 NEXMIFQ5QGS0 1516 aa8.79□□□□□ -1
RNF4-217ENST00000511892 PPLO60437 1756 aa8.78□□□□□ -1
RNF4-217ENST00000511892 SETBP1Q9Y6X0 1596 aa8.78□□□□□ -1
RNF4-217ENST00000511892 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
RNF4-217ENST00000511892 TBX22Q9Y458 520 aa8.78□□□□□ -1
RNF4-217ENST00000511892 ROBO1Q9Y6N7 1651 aa8.78□□□□□ -1
RNF4-217ENST00000511892 SETD1AO15047 1707 aaKnown RBP8.77□□□□□ -1
RNF4-217ENST00000511892 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1
RNF4-217ENST00000511892 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.77□□□□□ -1
RNF4-217ENST00000511892 PRR29P0C7W0 189 aa8.77□□□□□ -1.01
RNF4-217ENST00000511892 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
RNF4-217ENST00000511892 TRIM52Q96A61 297 aa8.77□□□□□ -1.01
RNF4-217ENST00000511892 PTPRUQ92729 1446 aa8.77□□□□□ -1.01
RNF4-217ENST00000511892 MED1Q15648 1581 aaPredicted RBP8.77□□□□□ -1.01
RNF4-217ENST00000511892 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
RNF4-217ENST00000511892 PIK3R4Q99570 1358 aa8.75□□□□□ -1.01
RNF4-217ENST00000511892 IFT172Q9UG01 1749 aa8.75□□□□□ -1.01
RNF4-217ENST00000511892 FAM135BQ49AJ0 1406 aa8.75□□□□□ -1.01
RNF4-217ENST00000511892 ZNF326Q5BKZ1 582 aaKnown RBP8.75□□□□□ -1.01
RNF4-217ENST00000511892 PHLPP1O60346 1717 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms