RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 HDGFP51858 240 aaKnown RBP7.55□□□□□ -1.2
XRCC4-205ENST00000511817 COPS2P61201 443 aa7.55□□□□□ -1.2
XRCC4-205ENST00000511817 PNMA3Q9UL41 463 aa7.55□□□□□ -1.2
XRCC4-205ENST00000511817 RNF223E7ERA6 249 aa7.54□□□□□ -1.2
XRCC4-205ENST00000511817 ZPR1O75312 459 aa7.54□□□□□ -1.2
XRCC4-205ENST00000511817 AVPP01185 164 aa7.54□□□□□ -1.2
XRCC4-205ENST00000511817 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
XRCC4-205ENST00000511817 NBR1Q14596 966 aa7.53□□□□□ -1.2
XRCC4-205ENST00000511817 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
XRCC4-205ENST00000511817 RNF40O75150 1001 aa7.52□□□□□ -1.2
XRCC4-205ENST00000511817 CTC1Q2NKJ3 1217 aa7.52□□□□□ -1.2
XRCC4-205ENST00000511817 LMOD2Q6P5Q4 547 aa7.52□□□□□ -1.21
XRCC4-205ENST00000511817 AXIN1O15169 862 aa7.51□□□□□ -1.21
XRCC4-205ENST00000511817 ANKLE1Q8NAG6 615 aa7.51□□□□□ -1.21
XRCC4-205ENST00000511817 SMCPP49901 116 aaPredicted RBP7.5□□□□□ -1.21
XRCC4-205ENST00000511817 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
XRCC4-205ENST00000511817 XP32Q5T750 250 aa7.49□□□□□ -1.21
XRCC4-205ENST00000511817 LIAT1Q6ZQX7 453 aa7.49□□□□□ -1.21
XRCC4-205ENST00000511817 NUDT18Q6ZVK8 323 aa7.49□□□□□ -1.21
XRCC4-205ENST00000511817 SLF2Q8IX21 1173 aa7.49□□□□□ -1.21
XRCC4-205ENST00000511817 KCTD17Q8N5Z5 321 aa7.47□□□□□ -1.21
XRCC4-205ENST00000511817 SWT1Q5T5J6 900 aaKnown RBP7.46□□□□□ -1.21
XRCC4-205ENST00000511817 RBM27Q9P2N5 1060 aaKnown RBP7.46□□□□□ -1.21
XRCC4-205ENST00000511817 PDIA6Q15084 440 aa7.45□□□□□ -1.22
XRCC4-205ENST00000511817 PRR14Q9BWN1 585 aa7.45□□□□□ -1.22
XRCC4-205ENST00000511817 SLC16A10Q8TF71 515 aa7.45□□□□□ -1.22
XRCC4-205ENST00000511817 PCDHB3Q9Y5E6 796 aa7.45□□□□□ -1.22
XRCC4-205ENST00000511817 KCNMA1Q12791 1236 aa7.44□□□□□ -1.22
XRCC4-205ENST00000511817 SPDYE16A6NNV3 312 aaPredicted RBP7.43□□□□□ -1.22
XRCC4-205ENST00000511817 GMPRP36959 345 aa7.43□□□□□ -1.22
XRCC4-205ENST00000511817 PPEF1O14829 653 aaPredicted RBP7.42□□□□□ -1.22
XRCC4-205ENST00000511817 SNRPBP14678 240 aaKnown RBP7.42□□□□□ -1.22
XRCC4-205ENST00000511817 PRIM1P49642 420 aaKnown RBP7.42□□□□□ -1.22
XRCC4-205ENST00000511817 BLOC1S3Q6QNY0 202 aa7.42□□□□□ -1.22
XRCC4-205ENST00000511817 TRIM47Q96LD4 638 aa7.42□□□□□ -1.22
XRCC4-205ENST00000511817 PKD2L1Q9P0L9 805 aa7.42□□□□□ -1.22
XRCC4-205ENST00000511817 SLC4A3P48751 1232 aa7.41□□□□□ -1.22
XRCC4-205ENST00000511817 SENP2Q9HC62 589 aa7.41□□□□□ -1.22
XRCC4-205ENST00000511817 TTC13Q8NBP0 860 aa7.41□□□□□ -1.22
XRCC4-205ENST00000511817 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
XRCC4-205ENST00000511817 TLL1O43897 1013 aa7.4□□□□□ -1.22
XRCC4-205ENST00000511817 S1PR4O95977 384 aa7.4□□□□□ -1.22
XRCC4-205ENST00000511817 TOR4AQ9NXH8 423 aa7.39□□□□□ -1.23
XRCC4-205ENST00000511817 GSK3AP49840 483 aa7.38□□□□□ -1.23
XRCC4-205ENST00000511817 KRTAP9-2Q9BYQ4 174 aa7.38□□□□□ -1.23
XRCC4-205ENST00000511817 CDHR5Q9HBB8 845 aa7.38□□□□□ -1.23
XRCC4-205ENST00000511817 ATP13A2Q9NQ11 1180 aa7.38□□□□□ -1.23
XRCC4-205ENST00000511817 IRF7Q92985 503 aa7.38□□□□□ -1.23
XRCC4-205ENST00000511817 FOXC1Q12948 553 aa7.36□□□□□ -1.23
XRCC4-205ENST00000511817 KIFC2Q96AC6 838 aa7.36□□□□□ -1.23
XRCC4-205ENST00000511817 PLA2G2CQ5R387 149 aa7.35□□□□□ -1.23
XRCC4-205ENST00000511817 NPAS3Q8IXF0 933 aa7.35□□□□□ -1.23
XRCC4-205ENST00000511817 EYA1Q99502 592 aa7.35□□□□□ -1.23
XRCC4-205ENST00000511817 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
XRCC4-205ENST00000511817 GRXCR2A6NFK2 248 aa7.34□□□□□ -1.23
XRCC4-205ENST00000511817 ADH1BP00325 375 aa7.34□□□□□ -1.23
XRCC4-205ENST00000511817 PADI6Q6TGC4 694 aa7.34□□□□□ -1.24
XRCC4-205ENST00000511817 TMEM151AQ8N4L1 468 aa7.34□□□□□ -1.24
XRCC4-205ENST00000511817 ACTN4O43707 911 aaKnown RBP7.33□□□□□ -1.24
XRCC4-205ENST00000511817 OSBPP22059 807 aa7.33□□□□□ -1.24
XRCC4-205ENST00000511817 CYP4X1Q8N118 509 aa7.33□□□□□ -1.24
XRCC4-205ENST00000511817 SLC6A16Q9GZN6 736 aa7.32□□□□□ -1.24
XRCC4-205ENST00000511817 NXF1Q9UBU9 619 aaKnown RBP7.32□□□□□ -1.24
XRCC4-205ENST00000511817 KMT5BQ4FZB7 885 aa7.31□□□□□ -1.24
XRCC4-205ENST00000511817 KRTAP1-3Q8IUG1 177 aa7.31□□□□□ -1.24
XRCC4-205ENST00000511817 PSMG3-AS1Q96PY0 264 aa7.31□□□□□ -1.24
XRCC4-205ENST00000511817 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
XRCC4-205ENST00000511817 RPIAP49247 311 aa7.3□□□□□ -1.24
XRCC4-205ENST00000511817 NR1I2O75469 434 aa7.29□□□□□ -1.24
XRCC4-205ENST00000511817 ARIH1Q9Y4X5 557 aaPredicted RBP7.29□□□□□ -1.24
XRCC4-205ENST00000511817 GDF11O95390 407 aa7.28□□□□□ -1.24
XRCC4-205ENST00000511817 H3BM21 787 aa7.26□□□□□ -1.25
XRCC4-205ENST00000511817 DNAJB2P25686 324 aa7.26□□□□□ -1.25
XRCC4-205ENST00000511817 RASSF7Q02833 373 aa7.26□□□□□ -1.25
XRCC4-205ENST00000511817 CD2BP2O95400 341 aaKnown RBP7.25□□□□□ -1.25
XRCC4-205ENST00000511817 IGHA1P01876 353 aa7.25□□□□□ -1.25
XRCC4-205ENST00000511817 CFHP08603 1231 aa7.25□□□□□ -1.25
XRCC4-205ENST00000511817 TMEM134Q9H6X4 195 aa7.24□□□□□ -1.25
XRCC4-205ENST00000511817 RNF225M0QZC1 329 aaPredicted RBP7.23□□□□□ -1.25
XRCC4-205ENST00000511817 SCUBE3Q8IX30 993 aa7.23□□□□□ -1.25
XRCC4-205ENST00000511817 ERBB4Q15303 1308 aa7.23□□□□□ -1.25
XRCC4-205ENST00000511817 E2F4Q16254 413 aa7.21□□□□□ -1.26
XRCC4-205ENST00000511817 SPSB2Q99619 263 aa7.21□□□□□ -1.26
XRCC4-205ENST00000511817 TTC24A2A3L6 582 aaPredicted RBP7.2□□□□□ -1.26
XRCC4-205ENST00000511817 RBM46Q8TBY0 533 aaKnown RBP7.2□□□□□ -1.26
XRCC4-205ENST00000511817 SLC10A3P09131 477 aa7.19□□□□□ -1.26
XRCC4-205ENST00000511817 SMPD1P17405 629 aa7.19□□□□□ -1.26
XRCC4-205ENST00000511817 FCF1Q9Y324 198 aaKnown RBP7.18□□□□□ -1.26
XRCC4-205ENST00000511817 RCCD1A6NED2 376 aa7.17□□□□□ -1.26
XRCC4-205ENST00000511817 DNMT3AQ9Y6K1 912 aaPredicted RBP7.17□□□□□ -1.26
XRCC4-205ENST00000511817 SNIP1Q8TAD8 396 aaKnown RBP7.16□□□□□ -1.26
XRCC4-205ENST00000511817 ADGRG1Q9Y653 693 aa7.16□□□□□ -1.26
XRCC4-205ENST00000511817 GPAT2Q6NUI2 795 aa7.16□□□□□ -1.26
XRCC4-205ENST00000511817 WNT7AO00755 349 aa7.15□□□□□ -1.27
XRCC4-205ENST00000511817 VEGFBP49765 207 aa7.15□□□□□ -1.27
XRCC4-205ENST00000511817 FOXK2Q01167 660 aa7.14□□□□□ -1.27
XRCC4-205ENST00000511817 PUS10Q3MIT2 529 aaKnown RBP7.14□□□□□ -1.27
XRCC4-205ENST00000511817 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
XRCC4-205ENST00000511817 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
XRCC4-205ENST00000511817 ZBTB24O43167 697 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms