RNA–Protein interactions for RNA: ENST00000511807.1

UBE2B-208, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-208ENST00000511807 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
UBE2B-208ENST00000511807 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
UBE2B-208ENST00000511807 ITGAEP38570 1179 aa17.11■□□□□ 0.33
UBE2B-208ENST00000511807 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
UBE2B-208ENST00000511807 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
UBE2B-208ENST00000511807 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
UBE2B-208ENST00000511807 TRIM26Q12899 539 aaPredicted RBP17.1■□□□□ 0.33
UBE2B-208ENST00000511807 RRBP1Q9P2E9 1410 aaKnown RBP17.09■□□□□ 0.33
UBE2B-208ENST00000511807 TET3O43151 1660 aa17.09■□□□□ 0.33
UBE2B-208ENST00000511807 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
UBE2B-208ENST00000511807 ROCK1Q13464 1354 aa17.07■□□□□ 0.32
UBE2B-208ENST00000511807 HDGFP51858 240 aaKnown RBP17.07■□□□□ 0.32
UBE2B-208ENST00000511807 UNC13BO14795 1591 aa17.06■□□□□ 0.32
UBE2B-208ENST00000511807 ZFYVE9O95405 1425 aa17.05■□□□□ 0.32
UBE2B-208ENST00000511807 PLEKHG1Q9ULL1 1385 aa17.05■□□□□ 0.32
UBE2B-208ENST00000511807 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
UBE2B-208ENST00000511807 NUP155O75694 1391 aa17.04■□□□□ 0.32
UBE2B-208ENST00000511807 NUTM2DQ5VT03 806 aaPredicted RBP17.04■□□□□ 0.32
UBE2B-208ENST00000511807 XIRP1Q702N8 1843 aaKnown RBP17.04■□□□□ 0.32
UBE2B-208ENST00000511807 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
UBE2B-208ENST00000511807 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
UBE2B-208ENST00000511807 MSH6P52701 1360 aa17.02■□□□□ 0.32
UBE2B-208ENST00000511807 TMEM131LA2VDJ0 1609 aa17.02■□□□□ 0.31
UBE2B-208ENST00000511807 NWD1Q149M9 1564 aa17.02■□□□□ 0.31
UBE2B-208ENST00000511807 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
UBE2B-208ENST00000511807 TBX22Q9Y458 520 aa16.99■□□□□ 0.31
UBE2B-208ENST00000511807 E9PCH4 1651 aa16.99■□□□□ 0.31
UBE2B-208ENST00000511807 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
UBE2B-208ENST00000511807 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
UBE2B-208ENST00000511807 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
UBE2B-208ENST00000511807 ROBO1Q9Y6N7 1651 aa16.96■□□□□ 0.31
UBE2B-208ENST00000511807 MYO5BQ9ULV0 1848 aa16.96■□□□□ 0.3
UBE2B-208ENST00000511807 ADAMTS13Q76LX8 1427 aa16.96■□□□□ 0.3
UBE2B-208ENST00000511807 RGS17Q9UGC6 210 aaPredicted RBP16.94■□□□□ 0.3
UBE2B-208ENST00000511807 PIK3R4Q99570 1358 aa16.91■□□□□ 0.3
UBE2B-208ENST00000511807 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
UBE2B-208ENST00000511807 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
UBE2B-208ENST00000511807 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
UBE2B-208ENST00000511807 DIP2AQ14689 1571 aa16.9■□□□□ 0.3
UBE2B-208ENST00000511807 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
UBE2B-208ENST00000511807 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
UBE2B-208ENST00000511807 ATF3P18847 181 aa16.89■□□□□ 0.29
UBE2B-208ENST00000511807 TRPM2O94759 1503 aa16.88■□□□□ 0.29
UBE2B-208ENST00000511807 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
UBE2B-208ENST00000511807 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
UBE2B-208ENST00000511807 JCADQ9P266 1359 aa16.87■□□□□ 0.29
UBE2B-208ENST00000511807 PTPRUQ92729 1446 aa16.87■□□□□ 0.29
UBE2B-208ENST00000511807 POTEAQ6S8J7 498 aa16.86■□□□□ 0.29
UBE2B-208ENST00000511807 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
UBE2B-208ENST00000511807 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
UBE2B-208ENST00000511807 NAIPQ13075 1403 aa16.84■□□□□ 0.29
UBE2B-208ENST00000511807 SPHKAPQ2M3C7 1700 aa16.83■□□□□ 0.28
UBE2B-208ENST00000511807 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
UBE2B-208ENST00000511807 METP08581 1390 aa16.81■□□□□ 0.28
UBE2B-208ENST00000511807 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
UBE2B-208ENST00000511807 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
UBE2B-208ENST00000511807 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
UBE2B-208ENST00000511807 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
UBE2B-208ENST00000511807 NRXN3Q9Y4C0 1643 aa16.8■□□□□ 0.28
UBE2B-208ENST00000511807 MEX3CQ5U5Q3 659 aaKnown RBP16.79■□□□□ 0.28
UBE2B-208ENST00000511807 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
UBE2B-208ENST00000511807 DCCP43146 1447 aa16.78■□□□□ 0.28
UBE2B-208ENST00000511807 NEXMIFQ5QGS0 1516 aa16.77■□□□□ 0.28
UBE2B-208ENST00000511807 XRN1Q8IZH2 1706 aaKnown RBP16.77■□□□□ 0.28
UBE2B-208ENST00000511807 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
UBE2B-208ENST00000511807 HFM1A2PYH4 1435 aa16.77■□□□□ 0.27
UBE2B-208ENST00000511807 AHDC1Q5TGY3 1603 aaPredicted RBP16.77■□□□□ 0.27
UBE2B-208ENST00000511807 LRP6O75581 1613 aa16.76■□□□□ 0.27
UBE2B-208ENST00000511807 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
UBE2B-208ENST00000511807 ACIN1Q9UKV3 1341 aaKnown RBP16.74■□□□□ 0.27
UBE2B-208ENST00000511807 MST1RQ04912 1400 aa16.74■□□□□ 0.27
UBE2B-208ENST00000511807 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
UBE2B-208ENST00000511807 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
UBE2B-208ENST00000511807 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
UBE2B-208ENST00000511807 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
UBE2B-208ENST00000511807 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
UBE2B-208ENST00000511807 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
UBE2B-208ENST00000511807 HRCP23327 699 aa16.72■□□□□ 0.27
UBE2B-208ENST00000511807 ZNF772Q68DY9 489 aaPredicted RBP16.71■□□□□ 0.27
UBE2B-208ENST00000511807 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
UBE2B-208ENST00000511807 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
UBE2B-208ENST00000511807 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
UBE2B-208ENST00000511807 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
UBE2B-208ENST00000511807 KIF1BO60333 1816 aa16.68■□□□□ 0.26
UBE2B-208ENST00000511807 RAB3GAP2Q9H2M9 1393 aa16.68■□□□□ 0.26
UBE2B-208ENST00000511807 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
UBE2B-208ENST00000511807 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
UBE2B-208ENST00000511807 NALCNQ8IZF0 1738 aa16.65■□□□□ 0.26
UBE2B-208ENST00000511807 C1orf167Q5SNV9 1468 aa16.65■□□□□ 0.26
UBE2B-208ENST00000511807 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
UBE2B-208ENST00000511807 ORAI2Q96SN7 254 aa16.64■□□□□ 0.25
UBE2B-208ENST00000511807 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
UBE2B-208ENST00000511807 AFF2P51816 1311 aa16.64■□□□□ 0.25
UBE2B-208ENST00000511807 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.25
UBE2B-208ENST00000511807 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
UBE2B-208ENST00000511807 RXRBP28702 533 aa16.63■□□□□ 0.25
UBE2B-208ENST00000511807 C8orf37Q96NL8 207 aa16.63■□□□□ 0.25
UBE2B-208ENST00000511807 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
UBE2B-208ENST00000511807 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
UBE2B-208ENST00000511807 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms