RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
RAB28-207ENST00000511649 HECW1Q76N89 1606 aa10.77□□□□□ -0.68
RAB28-207ENST00000511649 DOK7Q18PE1 504 aa10.77□□□□□ -0.69
RAB28-207ENST00000511649 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.69
RAB28-207ENST00000511649 RIMS1Q86UR5 1692 aaKnown RBP10.76□□□□□ -0.69
RAB28-207ENST00000511649 PHLDB1Q86UU1 1377 aa10.76□□□□□ -0.69
RAB28-207ENST00000511649 DENND4BO75064 1496 aaPredicted RBP10.75□□□□□ -0.69
RAB28-207ENST00000511649 CFAP74Q9C0B2 1584 aa10.75□□□□□ -0.69
RAB28-207ENST00000511649 POGZQ7Z3K3 1410 aa10.75□□□□□ -0.69
RAB28-207ENST00000511649 MYO5CQ9NQX4 1742 aa10.74□□□□□ -0.69
RAB28-207ENST00000511649 LMTK3Q96Q04 1460 aa10.74□□□□□ -0.69
RAB28-207ENST00000511649 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
RAB28-207ENST00000511649 SLC34A2O95436 690 aa10.73□□□□□ -0.69
RAB28-207ENST00000511649 WDR70Q9NW82 654 aa10.73□□□□□ -0.69
RAB28-207ENST00000511649 PLCH2O75038 1416 aa10.73□□□□□ -0.69
RAB28-207ENST00000511649 CDC42BPBQ9Y5S2 1711 aa10.72□□□□□ -0.69
RAB28-207ENST00000511649 PLEKHD1A6NEE1 506 aa10.71□□□□□ -0.69
RAB28-207ENST00000511649 RIMBP2O15034 1052 aa10.71□□□□□ -0.69
RAB28-207ENST00000511649 KDM5CP41229 1560 aa10.71□□□□□ -0.69
RAB28-207ENST00000511649 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
RAB28-207ENST00000511649 ARHGEF12Q9NZN5 1544 aa10.71□□□□□ -0.69
RAB28-207ENST00000511649 TROQ12816 1431 aaPredicted RBP10.7□□□□□ -0.7
RAB28-207ENST00000511649 CAMK2BQ13554 666 aa10.7□□□□□ -0.7
RAB28-207ENST00000511649 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
RAB28-207ENST00000511649 SCAPERQ9BY12 1400 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 UBTFP17480 764 aaKnown RBP10.69□□□□□ -0.7
RAB28-207ENST00000511649 VSIG10Q8N0Z9 540 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 ZSWIM6Q9HCJ5 1215 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 KDM2AQ9Y2K7 1162 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 FER1L4A9Z1Z3 1794 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 ABCA6Q8N139 1617 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 DIP2CQ9Y2E4 1556 aa10.69□□□□□ -0.7
RAB28-207ENST00000511649 CDC42BPAQ5VT25 1732 aa10.68□□□□□ -0.7
RAB28-207ENST00000511649 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
RAB28-207ENST00000511649 ITSN2Q9NZM3 1697 aa10.67□□□□□ -0.7
RAB28-207ENST00000511649 E2F4Q16254 413 aa10.67□□□□□ -0.7
RAB28-207ENST00000511649 OXER1Q8TDS5 423 aa10.67□□□□□ -0.7
RAB28-207ENST00000511649 MARVELD3Q96A59 401 aa10.67□□□□□ -0.7
RAB28-207ENST00000511649 EMILIN3Q9NT22 766 aa10.67□□□□□ -0.7
RAB28-207ENST00000511649 ABCC1P33527 1531 aa10.67□□□□□ -0.7
RAB28-207ENST00000511649 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
RAB28-207ENST00000511649 GPR153Q6NV75 609 aa10.66□□□□□ -0.7
RAB28-207ENST00000511649 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.7
RAB28-207ENST00000511649 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
RAB28-207ENST00000511649 MAGI2Q86UL8 1455 aa10.66□□□□□ -0.7
RAB28-207ENST00000511649 ARHGAP5Q13017 1502 aa10.65□□□□□ -0.7
RAB28-207ENST00000511649 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
RAB28-207ENST00000511649 TRAPPC8Q9Y2L5 1435 aa10.65□□□□□ -0.7
RAB28-207ENST00000511649 SAMD9LQ8IVG5 1584 aa10.64□□□□□ -0.71
RAB28-207ENST00000511649 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
RAB28-207ENST00000511649 ATP10AO60312 1499 aa10.63□□□□□ -0.71
RAB28-207ENST00000511649 KIDINS220Q9ULH0 1771 aa10.63□□□□□ -0.71
RAB28-207ENST00000511649 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
RAB28-207ENST00000511649 C9orf84Q5VXU9 1444 aa10.63□□□□□ -0.71
RAB28-207ENST00000511649 FYCO1Q9BQS8 1478 aa10.62□□□□□ -0.71
RAB28-207ENST00000511649 HSPA2P54652 639 aa10.62□□□□□ -0.71
RAB28-207ENST00000511649 AFAP1Q8N556 730 aa10.62□□□□□ -0.71
RAB28-207ENST00000511649 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.714e-7■■■■□ 21
RAB28-207ENST00000511649 ATP1B4Q9UN42 357 aaPredicted RBP10.62□□□□□ -0.71
RAB28-207ENST00000511649 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
RAB28-207ENST00000511649 REREQ9P2R6 1566 aa10.61□□□□□ -0.71
RAB28-207ENST00000511649 TBC1D12O60347 775 aa10.61□□□□□ -0.71
RAB28-207ENST00000511649 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
RAB28-207ENST00000511649 EMP3P54852 163 aa10.61□□□□□ -0.71
RAB28-207ENST00000511649 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
RAB28-207ENST00000511649 CLIP1P30622 1438 aa10.6□□□□□ -0.71
RAB28-207ENST00000511649 MLECQ14165 292 aa10.6□□□□□ -0.71
RAB28-207ENST00000511649 KCNV2Q8TDN2 545 aa10.6□□□□□ -0.71
RAB28-207ENST00000511649 SYCP2Q9BX26 1530 aa10.59□□□□□ -0.71
RAB28-207ENST00000511649 NUDT7P0C024 238 aa10.59□□□□□ -0.71
RAB28-207ENST00000511649 MLH3Q9UHC1 1453 aa10.59□□□□□ -0.71
RAB28-207ENST00000511649 STRCQ7RTU9 1775 aa10.59□□□□□ -0.71
RAB28-207ENST00000511649 GPATCH8Q9UKJ3 1502 aaKnown RBP10.58□□□□□ -0.72
RAB28-207ENST00000511649 C3P01024 1663 aa10.58□□□□□ -0.72
RAB28-207ENST00000511649 DPYSL4O14531 572 aa10.58□□□□□ -0.72
RAB28-207ENST00000511649 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
RAB28-207ENST00000511649 EFCAB2Q5VUJ9 269 aa10.58□□□□□ -0.72
RAB28-207ENST00000511649 ARIH1Q9Y4X5 557 aaPredicted RBP10.58□□□□□ -0.72
RAB28-207ENST00000511649 PREX1Q8TCU6 1659 aa10.57□□□□□ -0.72
RAB28-207ENST00000511649 INO80Q9ULG1 1556 aaPredicted RBP10.57□□□□□ -0.72
RAB28-207ENST00000511649 CEBPAP49715 358 aaPredicted RBP10.57□□□□□ -0.72
RAB28-207ENST00000511649 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
RAB28-207ENST00000511649 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
RAB28-207ENST00000511649 AGLP35573 1532 aa10.56□□□□□ -0.72
RAB28-207ENST00000511649 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
RAB28-207ENST00000511649 POTEB3A0JP26 581 aa10.54□□□□□ -0.72
RAB28-207ENST00000511649 EVI5O60447 810 aa10.54□□□□□ -0.72
RAB28-207ENST00000511649 POTEBQ6S5H4 581 aa10.54□□□□□ -0.72
RAB28-207ENST00000511649 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
RAB28-207ENST00000511649 PDIA6Q15084 440 aa10.53□□□□□ -0.72
RAB28-207ENST00000511649 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
RAB28-207ENST00000511649 CDK11AQ9UQ88 783 aaPredicted RBP10.53□□□□□ -0.72
RAB28-207ENST00000511649 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
RAB28-207ENST00000511649 SUPT6HQ7KZ85 1726 aaKnown RBP10.52□□□□□ -0.73
RAB28-207ENST00000511649 ATP7AQ04656 1500 aa10.52□□□□□ -0.73
RAB28-207ENST00000511649 ERBB3P21860 1342 aa10.52□□□□□ -0.73
RAB28-207ENST00000511649 CEP162Q5TB80 1403 aa10.51□□□□□ -0.73
RAB28-207ENST00000511649 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
RAB28-207ENST00000511649 MBD5Q9P267 1494 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms