RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 NEXNQ0ZGT2 675 aa11.23□□□□□ -0.61
NEK1-207ENST00000511633 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
NEK1-207ENST00000511633 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
NEK1-207ENST00000511633 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
NEK1-207ENST00000511633 TOPBP1Q92547 1522 aa11.23□□□□□ -0.61
NEK1-207ENST00000511633 C9orf78Q9NZ63 289 aaPredicted RBP11.23□□□□□ -0.61
NEK1-207ENST00000511633 PTMSP20962 102 aa11.22□□□□□ -0.61
NEK1-207ENST00000511633 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
NEK1-207ENST00000511633 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
NEK1-207ENST00000511633 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
NEK1-207ENST00000511633 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
NEK1-207ENST00000511633 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
NEK1-207ENST00000511633 MEX3CQ5U5Q3 659 aaKnown RBP11.22□□□□□ -0.61
NEK1-207ENST00000511633 ST18O60284 1047 aa11.21□□□□□ -0.61
NEK1-207ENST00000511633 POLA1P09884 1462 aaPredicted RBP11.21□□□□□ -0.62
NEK1-207ENST00000511633 STAC3Q96MF2 364 aa11.21□□□□□ -0.62
NEK1-207ENST00000511633 MIA2Q96PC5 1412 aa11.21□□□□□ -0.62
NEK1-207ENST00000511633 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
NEK1-207ENST00000511633 NCBP3Q53F19 620 aaKnown RBP11.2□□□□□ -0.62
NEK1-207ENST00000511633 SYAP1Q96A49 352 aaPredicted RBP11.2□□□□□ -0.62
NEK1-207ENST00000511633 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
NEK1-207ENST00000511633 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
NEK1-207ENST00000511633 RASSF8Q8NHQ8 419 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 DZIP1LQ8IYY4 767 aaKnown RBP11.19□□□□□ -0.62
NEK1-207ENST00000511633 RRBP1Q9P2E9 1410 aaKnown RBP11.19□□□□□ -0.62
NEK1-207ENST00000511633 NLRP6P59044 892 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 NLRP2Q9NX02 1062 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 DDX19BQ9UMR2 479 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 CNTLNQ9NXG0 1405 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 TOP2BQ02880 1626 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 TXNDC2Q86VQ3 553 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
NEK1-207ENST00000511633 C9orf84Q5VXU9 1444 aa11.18□□□□□ -0.62
NEK1-207ENST00000511633 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
NEK1-207ENST00000511633 EFCAB5A4FU69 1503 aa11.18□□□□□ -0.62
NEK1-207ENST00000511633 AEBP2Q6ZN18 517 aaPredicted RBP11.18□□□□□ -0.62
NEK1-207ENST00000511633 SCAPERQ9BY12 1400 aa11.18□□□□□ -0.62
NEK1-207ENST00000511633 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
NEK1-207ENST00000511633 EHBP1L1Q8N3D4 1523 aa11.18□□□□□ -0.62
NEK1-207ENST00000511633 PDE4AP27815 886 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 DDX58O95786 925 aaKnown RBP11.17□□□□□ -0.62
NEK1-207ENST00000511633 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 HMGXB3Q12766 1538 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 WASHC2AQ641Q2 1341 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 GNAI1P63096 354 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
NEK1-207ENST00000511633 MTHFSP49914 203 aa11.16□□□□□ -0.62
NEK1-207ENST00000511633 ESCO1Q5FWF5 840 aa11.16□□□□□ -0.62
NEK1-207ENST00000511633 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
NEK1-207ENST00000511633 IFIT2P09913 472 aaKnown RBP11.16□□□□□ -0.62
NEK1-207ENST00000511633 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
NEK1-207ENST00000511633 VPS53Q5VIR6 699 aa11.16□□□□□ -0.62
NEK1-207ENST00000511633 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
NEK1-207ENST00000511633 CREBRFQ8IUR6 639 aa11.15□□□□□ -0.62
NEK1-207ENST00000511633 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
NEK1-207ENST00000511633 RAPGEF3O95398 923 aa11.15□□□□□ -0.62
NEK1-207ENST00000511633 TPM4P67936 248 aa11.15□□□□□ -0.62
NEK1-207ENST00000511633 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
NEK1-207ENST00000511633 FOXD4L6Q3SYB3 417 aaPredicted RBP11.15□□□□□ -0.62
NEK1-207ENST00000511633 FOXD4L3Q6VB84 417 aaPredicted RBP11.15□□□□□ -0.62
NEK1-207ENST00000511633 HECW1Q76N89 1606 aa11.15□□□□□ -0.62
NEK1-207ENST00000511633 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.63
NEK1-207ENST00000511633 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
NEK1-207ENST00000511633 GOLGA6L3A6NEY3 463 aa11.14□□□□□ -0.63
NEK1-207ENST00000511633 H3BQV1 296 aa11.14□□□□□ -0.63
NEK1-207ENST00000511633 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
NEK1-207ENST00000511633 TROQ12816 1431 aaPredicted RBP11.14□□□□□ -0.63
NEK1-207ENST00000511633 CCDC34Q96HJ3 373 aa11.14□□□□□ -0.63
NEK1-207ENST00000511633 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
NEK1-207ENST00000511633 KIF3AQ9Y496 699 aa11.14□□□□□ -0.63
NEK1-207ENST00000511633 MARCH6O60337 910 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 G3BP1Q13283 466 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEK1-207ENST00000511633 PROSER2Q86WR7 435 aaPredicted RBP11.13□□□□□ -0.63
NEK1-207ENST00000511633 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 ROCK1Q13464 1354 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 GPRASP1Q5JY77 1395 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
NEK1-207ENST00000511633 VPS37DQ86XT2 251 aa11.12□□□□□ -0.63
NEK1-207ENST00000511633 PLEKHH2Q8IVE3 1493 aa11.12□□□□□ -0.63
NEK1-207ENST00000511633 KIAA1107Q9UPP5 1409 aa11.12□□□□□ -0.63
NEK1-207ENST00000511633 APPP05067 770 aa11.12□□□□□ -0.63
NEK1-207ENST00000511633 RAD21O60216 631 aa11.12□□□□□ -0.63
NEK1-207ENST00000511633 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
NEK1-207ENST00000511633 PPP2R1AP30153 589 aa11.12□□□□□ -0.63
NEK1-207ENST00000511633 RUFY2Q8WXA3 655 aa11.11□□□□□ -0.63
NEK1-207ENST00000511633 HFM1A2PYH4 1435 aa11.11□□□□□ -0.63
NEK1-207ENST00000511633 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
NEK1-207ENST00000511633 CDK13Q14004 1512 aaKnown RBP11.11□□□□□ -0.63
NEK1-207ENST00000511633 NOL10Q9BSC4 688 aaKnown RBP11.11□□□□□ -0.63
NEK1-207ENST00000511633 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
NEK1-207ENST00000511633 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
NEK1-207ENST00000511633 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
NEK1-207ENST00000511633 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
NEK1-207ENST00000511633 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
NEK1-207ENST00000511633 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms