RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ADGRG1Q9Y653 693 aa7.29□□□□□ -1.24
TRAPPC11-207ENST00000511409 BRPF1P55201 1214 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC11-207ENST00000511409 NRG2O14511 850 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC11-207ENST00000511409 FECHP22830 423 aa7.27□□□□□ -1.25
TRAPPC11-207ENST00000511409 MAP2K5Q13163 448 aa7.27□□□□□ -1.25
TRAPPC11-207ENST00000511409 RBM46Q8TBY0 533 aaKnown RBP7.27□□□□□ -1.25
TRAPPC11-207ENST00000511409 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC11-207ENST00000511409 SMAPO00193 183 aa7.26□□□□□ -1.25
TRAPPC11-207ENST00000511409 OATP04181 439 aa7.26□□□□□ -1.25
TRAPPC11-207ENST00000511409 TJAP1Q5JTD0 557 aa7.26□□□□□ -1.25
TRAPPC11-207ENST00000511409 TRAF7Q6Q0C0 670 aa7.26□□□□□ -1.25
TRAPPC11-207ENST00000511409 V9GY48 417 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC11-207ENST00000511409 TRIM66O15016 1216 aa7.25□□□□□ -1.25
TRAPPC11-207ENST00000511409 CCDC102AQ96A19 550 aa7.25□□□□□ -1.25
TRAPPC11-207ENST00000511409 IRF6O14896 467 aa7.24□□□□□ -1.25
TRAPPC11-207ENST00000511409 GFRA3O60609 400 aa7.24□□□□□ -1.25
TRAPPC11-207ENST00000511409 DNAJB2P25686 324 aa7.24□□□□□ -1.25
TRAPPC11-207ENST00000511409 HDGFP51858 240 aaKnown RBP7.24□□□□□ -1.25
TRAPPC11-207ENST00000511409 SAMD7Q7Z3H4 446 aa7.24□□□□□ -1.25
TRAPPC11-207ENST00000511409 PXYLP1Q8TE99 480 aa7.24□□□□□ -1.25
TRAPPC11-207ENST00000511409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.23□□□□□ -1.25
TRAPPC11-207ENST00000511409 PPP4CP60510 307 aa7.23□□□□□ -1.25
TRAPPC11-207ENST00000511409 PDE4DQ08499 809 aa7.23□□□□□ -1.25
TRAPPC11-207ENST00000511409 NECTIN2Q92692 538 aa7.23□□□□□ -1.25
TRAPPC11-207ENST00000511409 TMEM134Q9H6X4 195 aa7.23□□□□□ -1.25
TRAPPC11-207ENST00000511409 IL21Q9HBE4 155 aa7.23□□□□□ -1.25
TRAPPC11-207ENST00000511409 TMEM132AQ24JP5 1023 aa7.22□□□□□ -1.25
TRAPPC11-207ENST00000511409 METTL3Q86U44 580 aaKnown RBP7.22□□□□□ -1.25
TRAPPC11-207ENST00000511409 PRKD2Q9BZL6 878 aa7.22□□□□□ -1.25
TRAPPC11-207ENST00000511409 GPBP1L1Q9HC44 474 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC11-207ENST00000511409 RCCD1A6NED2 376 aa7.21□□□□□ -1.26
TRAPPC11-207ENST00000511409 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
TRAPPC11-207ENST00000511409 MTRQ99707 1265 aa7.21□□□□□ -1.26
TRAPPC11-207ENST00000511409 SWT1Q5T5J6 900 aaKnown RBP7.2□□□□□ -1.26
TRAPPC11-207ENST00000511409 TTLL12Q14166 644 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-207ENST00000511409 PPP1R18Q6NYC8 613 aa7.19□□□□□ -1.26
TRAPPC11-207ENST00000511409 KDM4CQ9H3R0 1056 aa7.19□□□□□ -1.26
TRAPPC11-207ENST00000511409 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
TRAPPC11-207ENST00000511409 FAM161AQ3B820 660 aa7.18□□□□□ -1.26
TRAPPC11-207ENST00000511409 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.17□□□□□ -1.26
TRAPPC11-207ENST00000511409 AMHR2Q16671 573 aa7.16□□□□□ -1.26
TRAPPC11-207ENST00000511409 IL27Q8NEV9 243 aa7.16□□□□□ -1.26
TRAPPC11-207ENST00000511409 DAXXQ9UER7 740 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC11-207ENST00000511409 PARP9Q8IXQ6 854 aa7.15□□□□□ -1.26
TRAPPC11-207ENST00000511409 PRR14Q9BWN1 585 aa7.15□□□□□ -1.26
TRAPPC11-207ENST00000511409 PHOX2BQ99453 314 aa7.14□□□□□ -1.27
TRAPPC11-207ENST00000511409 APLP1P51693 650 aa7.13□□□□□ -1.27
TRAPPC11-207ENST00000511409 MDM2Q00987 491 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC11-207ENST00000511409 TMUB1Q9BVT8 246 aa7.13□□□□□ -1.27
TRAPPC11-207ENST00000511409 GTF3C3Q9Y5Q9 886 aa7.13□□□□□ -1.27
TRAPPC11-207ENST00000511409 CLCN1P35523 988 aa7.12□□□□□ -1.27
TRAPPC11-207ENST00000511409 GGCXP38435 758 aa7.12□□□□□ -1.27
TRAPPC11-207ENST00000511409 RSPH4AQ5TD94 716 aa7.12□□□□□ -1.27
TRAPPC11-207ENST00000511409 NLRP7Q8WX94 980 aa7.12□□□□□ -1.27
TRAPPC11-207ENST00000511409 ZNF516Q92618 1163 aa7.12□□□□□ -1.27
TRAPPC11-207ENST00000511409 PDZRN3Q9UPQ7 1066 aa7.12□□□□□ -1.27
TRAPPC11-207ENST00000511409 SLC10A3P09131 477 aa7.11□□□□□ -1.27
TRAPPC11-207ENST00000511409 GIGYF2Q6Y7W6 1299 aaKnown RBP7.11□□□□□ -1.27
TRAPPC11-207ENST00000511409 FAM117AQ9C073 453 aa7.11□□□□□ -1.27
TRAPPC11-207ENST00000511409 RNF40O75150 1001 aa7.1□□□□□ -1.27
TRAPPC11-207ENST00000511409 ZNF787Q6DD87 383 aa7.1□□□□□ -1.27
TRAPPC11-207ENST00000511409 SULF1Q8IWU6 871 aa7.1□□□□□ -1.27
TRAPPC11-207ENST00000511409 GPCPD1Q9NPB8 672 aa7.1□□□□□ -1.27
TRAPPC11-207ENST00000511409 ACTN4O43707 911 aaKnown RBP7.09□□□□□ -1.27
TRAPPC11-207ENST00000511409 KMT5BQ4FZB7 885 aa7.09□□□□□ -1.27
TRAPPC11-207ENST00000511409 DDRGK1Q96HY6 314 aa7.09□□□□□ -1.27
TRAPPC11-207ENST00000511409 REPIN1Q9BWE0 567 aaKnown RBP7.09□□□□□ -1.27
TRAPPC11-207ENST00000511409 CFHP08603 1231 aa7.07□□□□□ -1.28
TRAPPC11-207ENST00000511409 MS4A1P11836 297 aa7.07□□□□□ -1.28
TRAPPC11-207ENST00000511409 NKX2-3Q8TAU0 364 aa7.07□□□□□ -1.28
TRAPPC11-207ENST00000511409 ZPR1O75312 459 aa7.06□□□□□ -1.28
TRAPPC11-207ENST00000511409 SSTR3P32745 418 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC11-207ENST00000511409 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
TRAPPC11-207ENST00000511409 CD46P15529 392 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 GCGRP47871 477 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 PRR20EP86478 221 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 PRR20CP86479 221 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 PRR20DP86480 221 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 PRR20BP86481 221 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 PRR20AP86496 221 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 ZNF775Q96BV0 537 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 PCDHB3Q9Y5E6 796 aa7.05□□□□□ -1.28
TRAPPC11-207ENST00000511409 PLEKHG3A1L390 1219 aa7.04□□□□□ -1.28
TRAPPC11-207ENST00000511409 DDX11L8A8MPP1 907 aa7.04□□□□□ -1.28
TRAPPC11-207ENST00000511409 ATP1B4Q9UN42 357 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC11-207ENST00000511409 COPS2P61201 443 aa7.03□□□□□ -1.28
TRAPPC11-207ENST00000511409 BEGAINQ9BUH8 593 aa7.03□□□□□ -1.28
TRAPPC11-207ENST00000511409 FAM217BQ9NTX9 383 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-207ENST00000511409 DGAT1O75907 488 aa7.02□□□□□ -1.29
TRAPPC11-207ENST00000511409 RDH13Q8NBN7 331 aa7.02□□□□□ -1.29
TRAPPC11-207ENST00000511409 EMID1Q96A84 441 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC11-207ENST00000511409 RNF223E7ERA6 249 aa7.01□□□□□ -1.29
TRAPPC11-207ENST00000511409 NR1I2O75469 434 aa7.01□□□□□ -1.29
TRAPPC11-207ENST00000511409 ATP6V1AP38606 617 aa7.01□□□□□ -1.29
TRAPPC11-207ENST00000511409 SLC19A1P41440 591 aa7.01□□□□□ -1.29
TRAPPC11-207ENST00000511409 BLOC1S3Q6QNY0 202 aa7.01□□□□□ -1.29
TRAPPC11-207ENST00000511409 ANKLE1Q8NAG6 615 aa7.01□□□□□ -1.29
TRAPPC11-207ENST00000511409 SALL2Q9Y467 1007 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC11-207ENST00000511409 USP46P62068 366 aa7□□□□□ -1.29
TRAPPC11-207ENST00000511409 MYT1Q01538 1121 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms