RNA–Protein interactions for RNA: ENST00000511317.1

DDX60-204, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-204ENST00000511317 METTL3Q86U44 580 aaKnown RBP13.54□□□□□ -0.24
DDX60-204ENST00000511317 IL21Q9HBE4 155 aa13.54□□□□□ -0.24
DDX60-204ENST00000511317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
DDX60-204ENST00000511317 SLC10A3P09131 477 aa13.51□□□□□ -0.25
DDX60-204ENST00000511317 OATP04181 439 aa13.5□□□□□ -0.25
DDX60-204ENST00000511317 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
DDX60-204ENST00000511317 COPS2P61201 443 aa13.49□□□□□ -0.25
DDX60-204ENST00000511317 NKX2-3Q8TAU0 364 aa13.49□□□□□ -0.25
DDX60-204ENST00000511317 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
DDX60-204ENST00000511317 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
DDX60-204ENST00000511317 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
DDX60-204ENST00000511317 NLRP7Q8WX94 980 aa13.45□□□□□ -0.26
DDX60-204ENST00000511317 CFHP08603 1231 aa13.44□□□□□ -0.26
DDX60-204ENST00000511317 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
DDX60-204ENST00000511317 BLOC1S3Q6QNY0 202 aa13.44□□□□□ -0.26
DDX60-204ENST00000511317 PCDHB3Q9Y5E6 796 aa13.43□□□□□ -0.26
DDX60-204ENST00000511317 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
DDX60-204ENST00000511317 ZPR1O75312 459 aa13.42□□□□□ -0.26
DDX60-204ENST00000511317 PRR14Q9BWN1 585 aa13.41□□□□□ -0.26
DDX60-204ENST00000511317 TLL1O43897 1013 aa13.37□□□□□ -0.27
DDX60-204ENST00000511317 KMT5BQ4FZB7 885 aa13.36□□□□□ -0.27
DDX60-204ENST00000511317 IRX2Q9BZI1 471 aaPredicted RBP13.36□□□□□ -0.27
DDX60-204ENST00000511317 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
DDX60-204ENST00000511317 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
DDX60-204ENST00000511317 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
DDX60-204ENST00000511317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX60-204ENST00000511317 PRKD2Q9BZL6 878 aa13.31□□□□□ -0.28
DDX60-204ENST00000511317 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
DDX60-204ENST00000511317 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
DDX60-204ENST00000511317 EMID1Q96A84 441 aaPredicted RBP13.28□□□□□ -0.28
DDX60-204ENST00000511317 IRF6O14896 467 aa13.27□□□□□ -0.29
DDX60-204ENST00000511317 RNF223E7ERA6 249 aa13.26□□□□□ -0.29
DDX60-204ENST00000511317 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
DDX60-204ENST00000511317 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
DDX60-204ENST00000511317 RDH13Q8NBN7 331 aa13.26□□□□□ -0.29
DDX60-204ENST00000511317 TMUB1Q9BVT8 246 aa13.26□□□□□ -0.29
DDX60-204ENST00000511317 V9GY48 417 aaPredicted RBP13.25□□□□□ -0.29
DDX60-204ENST00000511317 GCGRP47871 477 aa13.24□□□□□ -0.29
DDX60-204ENST00000511317 FUT2Q10981 343 aa13.24□□□□□ -0.29
DDX60-204ENST00000511317 NR1I2O75469 434 aa13.23□□□□□ -0.29
DDX60-204ENST00000511317 S1PR4O95977 384 aa13.23□□□□□ -0.29
DDX60-204ENST00000511317 RSPH4AQ5TD94 716 aa13.23□□□□□ -0.29
DDX60-204ENST00000511317 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
DDX60-204ENST00000511317 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
DDX60-204ENST00000511317 ADH1BP00325 375 aa13.22□□□□□ -0.29
DDX60-204ENST00000511317 GGCXP38435 758 aa13.22□□□□□ -0.29
DDX60-204ENST00000511317 MORN1Q5T089 497 aa13.22□□□□□ -0.29
DDX60-204ENST00000511317 PPEF1O14829 653 aaPredicted RBP13.21□□□□□ -0.29
DDX60-204ENST00000511317 LMOD2Q6P5Q4 547 aa13.21□□□□□ -0.29
DDX60-204ENST00000511317 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
DDX60-204ENST00000511317 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
DDX60-204ENST00000511317 LCE2BO14633 110 aa13.18□□□□□ -0.3
DDX60-204ENST00000511317 CD46P15529 392 aa13.18□□□□□ -0.3
DDX60-204ENST00000511317 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
DDX60-204ENST00000511317 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
DDX60-204ENST00000511317 SLC27A5Q9Y2P5 690 aa13.17□□□□□ -0.3
DDX60-204ENST00000511317 ANKLE1Q8NAG6 615 aa13.16□□□□□ -0.3
DDX60-204ENST00000511317 PLA2G2CQ5R387 149 aa13.15□□□□□ -0.3
DDX60-204ENST00000511317 SPSB2Q99619 263 aa13.15□□□□□ -0.3
DDX60-204ENST00000511317 GFRA3O60609 400 aa13.14□□□□□ -0.31
DDX60-204ENST00000511317 SLC6A16Q9GZN6 736 aa13.14□□□□□ -0.31
DDX60-204ENST00000511317 LIAT1Q6ZQX7 453 aa13.12□□□□□ -0.31
DDX60-204ENST00000511317 TRIM67Q6ZTA4 783 aa13.12□□□□□ -0.31
DDX60-204ENST00000511317 REPIN1Q9BWE0 567 aaKnown RBP13.12□□□□□ -0.31
DDX60-204ENST00000511317 SLC19A1P41440 591 aa13.11□□□□□ -0.31
DDX60-204ENST00000511317 Q6ZNB5 142 aa13.11□□□□□ -0.31
DDX60-204ENST00000511317 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
DDX60-204ENST00000511317 ZMYND10O75800 440 aa13.1□□□□□ -0.31
DDX60-204ENST00000511317 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
DDX60-204ENST00000511317 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
DDX60-204ENST00000511317 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
DDX60-204ENST00000511317 LAPTM4AQ15012 233 aa13.09□□□□□ -0.31
DDX60-204ENST00000511317 BRICD5Q6PL45 260 aa13.09□□□□□ -0.31
DDX60-204ENST00000511317 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
DDX60-204ENST00000511317 HLA-CQ95604 372 aa13.08□□□□□ -0.32
DDX60-204ENST00000511317 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
DDX60-204ENST00000511317 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.32
DDX60-204ENST00000511317 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
DDX60-204ENST00000511317 NRG2O14511 850 aaPredicted RBP13.07□□□□□ -0.32
DDX60-204ENST00000511317 PRDM9Q9NQV7 894 aa13.07□□□□□ -0.32
DDX60-204ENST00000511317 KDM4AO75164 1064 aa13.05□□□□□ -0.32
DDX60-204ENST00000511317 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
DDX60-204ENST00000511317 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
DDX60-204ENST00000511317 CLCN1P35523 988 aa13.04□□□□□ -0.32
DDX60-204ENST00000511317 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
DDX60-204ENST00000511317 HOXA2O43364 376 aa13.01□□□□□ -0.33
DDX60-204ENST00000511317 MSS51Q4VC12 460 aa13.01□□□□□ -0.33
DDX60-204ENST00000511317 FCF1Q9Y324 198 aaKnown RBP13.01□□□□□ -0.33
DDX60-204ENST00000511317 GUCA2AQ02747 115 aa12.99□□□□□ -0.33
DDX60-204ENST00000511317 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
DDX60-204ENST00000511317 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
DDX60-204ENST00000511317 AMHR2Q16671 573 aa12.98□□□□□ -0.33
DDX60-204ENST00000511317 ZNF697Q5TEC3 545 aa12.98□□□□□ -0.33
DDX60-204ENST00000511317 GDF9O60383 454 aa12.97□□□□□ -0.33
DDX60-204ENST00000511317 USP46P62068 366 aa12.97□□□□□ -0.33
DDX60-204ENST00000511317 TRAF7Q6Q0C0 670 aa12.96□□□□□ -0.33
DDX60-204ENST00000511317 PRR20EP86478 221 aa12.95□□□□□ -0.34
DDX60-204ENST00000511317 PRR20CP86479 221 aa12.95□□□□□ -0.34
DDX60-204ENST00000511317 PRR20DP86480 221 aa12.95□□□□□ -0.34
DDX60-204ENST00000511317 PRR20BP86481 221 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms