RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
SNF8-210ENST00000511214 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
SNF8-210ENST00000511214 CRBNQ96SW2 442 aa11.93□□□□□ -0.5
SNF8-210ENST00000511214 SHROOM2Q13796 1616 aa11.93□□□□□ -0.5
SNF8-210ENST00000511214 MADDQ8WXG6 1647 aa11.93□□□□□ -0.5
SNF8-210ENST00000511214 ZNF521Q96K83 1311 aa11.92□□□□□ -0.5
SNF8-210ENST00000511214 ABCC2Q92887 1545 aa11.92□□□□□ -0.5
SNF8-210ENST00000511214 TTC37Q6PGP7 1564 aa11.92□□□□□ -0.5
SNF8-210ENST00000511214 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
SNF8-210ENST00000511214 SCAF11Q99590 1463 aaKnown RBP11.91□□□□□ -0.5
SNF8-210ENST00000511214 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
SNF8-210ENST00000511214 FBLN2P98095 1184 aa11.91□□□□□ -0.5
SNF8-210ENST00000511214 TRPM2O94759 1503 aa11.91□□□□□ -0.5
SNF8-210ENST00000511214 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
SNF8-210ENST00000511214 SPHKAPQ2M3C7 1700 aa11.9□□□□□ -0.5
SNF8-210ENST00000511214 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
SNF8-210ENST00000511214 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
SNF8-210ENST00000511214 RTEL1-TNFRSF6BF6WH68 1400 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 PTPRTO14522 1441 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 PLCH2O75038 1416 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 NEFMP07197 916 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNF8-210ENST00000511214 RGL3Q3MIN7 710 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 TRMT2AQ8IZ69 625 aaKnown RBP11.89□□□□□ -0.51
SNF8-210ENST00000511214 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 ARAP3Q8WWN8 1544 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 NINLQ9Y2I6 1382 aa11.89□□□□□ -0.51
SNF8-210ENST00000511214 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
SNF8-210ENST00000511214 FAM161AQ3B820 660 aa11.88□□□□□ -0.51
SNF8-210ENST00000511214 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
SNF8-210ENST00000511214 CEP152O94986 1710 aa11.88□□□□□ -0.51
SNF8-210ENST00000511214 ABCC1P33527 1531 aa11.87□□□□□ -0.51
SNF8-210ENST00000511214 ADAMTS8Q9UP79 889 aa11.87□□□□□ -0.51
SNF8-210ENST00000511214 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
SNF8-210ENST00000511214 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
SNF8-210ENST00000511214 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
SNF8-210ENST00000511214 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
SNF8-210ENST00000511214 UHRF1BP1LA0JNW5 1464 aa11.85□□□□□ -0.51
SNF8-210ENST00000511214 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
SNF8-210ENST00000511214 PLIN1O60240 522 aa11.85□□□□□ -0.51
SNF8-210ENST00000511214 AAMPQ13685 434 aa11.85□□□□□ -0.51
SNF8-210ENST00000511214 NKTRP30414 1462 aaKnown RBP11.84□□□□□ -0.51
SNF8-210ENST00000511214 EFCAB2Q5VUJ9 269 aa11.84□□□□□ -0.51
SNF8-210ENST00000511214 TET3O43151 1660 aa11.84□□□□□ -0.51
SNF8-210ENST00000511214 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
SNF8-210ENST00000511214 MYOM1P52179 1685 aa11.84□□□□□ -0.51
SNF8-210ENST00000511214 MYOM2P54296 1465 aa11.83□□□□□ -0.52
SNF8-210ENST00000511214 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
SNF8-210ENST00000511214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.523e-7■■□□□ 14.5
SNF8-210ENST00000511214 DAXXQ9UER7 740 aaPredicted RBP11.83□□□□□ -0.52
SNF8-210ENST00000511214 LAS1LQ9Y4W2 734 aaKnown RBP11.83□□□□□ -0.52
SNF8-210ENST00000511214 VWDEQ8N2E2 1590 aa11.83□□□□□ -0.52
SNF8-210ENST00000511214 E9PSI1 815 aa11.82□□□□□ -0.52
SNF8-210ENST00000511214 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
SNF8-210ENST00000511214 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
SNF8-210ENST00000511214 C8orf34Q49A92 452 aa11.81□□□□□ -0.52
SNF8-210ENST00000511214 CLTCL1P53675 1640 aa11.8□□□□□ -0.52
SNF8-210ENST00000511214 GSE1Q14687 1217 aa11.8□□□□□ -0.52
SNF8-210ENST00000511214 C20orf194Q5TEA3 1177 aa11.8□□□□□ -0.52
SNF8-210ENST00000511214 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
SNF8-210ENST00000511214 MYO3AQ8NEV4 1616 aa11.79□□□□□ -0.52
SNF8-210ENST00000511214 NFKBIBQ15653 356 aa11.79□□□□□ -0.52
SNF8-210ENST00000511214 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
SNF8-210ENST00000511214 MAPK8IP3Q9UPT6 1336 aa11.79□□□□□ -0.52
SNF8-210ENST00000511214 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
SNF8-210ENST00000511214 KANK1Q14678 1352 aa11.79□□□□□ -0.52
SNF8-210ENST00000511214 VIRMAQ69YN4 1812 aaKnown RBP11.78□□□□□ -0.52
SNF8-210ENST00000511214 CHD1O14646 1710 aa11.77□□□□□ -0.52
SNF8-210ENST00000511214 ZCCHC11Q5TAX3 1644 aaKnown RBP11.77□□□□□ -0.53
SNF8-210ENST00000511214 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.53
SNF8-210ENST00000511214 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
SNF8-210ENST00000511214 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
SNF8-210ENST00000511214 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
SNF8-210ENST00000511214 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
SNF8-210ENST00000511214 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
SNF8-210ENST00000511214 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
SNF8-210ENST00000511214 LMTK2Q8IWU2 1503 aa11.73□□□□□ -0.53
SNF8-210ENST00000511214 ABCA6Q8N139 1617 aa11.73□□□□□ -0.53
SNF8-210ENST00000511214 USP32Q8NFA0 1604 aa11.73□□□□□ -0.53
SNF8-210ENST00000511214 IFT172Q9UG01 1749 aa11.73□□□□□ -0.53
SNF8-210ENST00000511214 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
SNF8-210ENST00000511214 APAF1O14727 1248 aa11.72□□□□□ -0.53
SNF8-210ENST00000511214 SLC4A2P04920 1241 aa11.72□□□□□ -0.53
SNF8-210ENST00000511214 BECN1Q14457 450 aa11.72□□□□□ -0.53
SNF8-210ENST00000511214 FANCAO15360 1455 aa11.71□□□□□ -0.53
SNF8-210ENST00000511214 CENPJQ9HC77 1338 aaPredicted RBP11.71□□□□□ -0.53
SNF8-210ENST00000511214 IL27Q8NEV9 243 aa11.71□□□□□ -0.53
SNF8-210ENST00000511214 PMFBP1Q8TBY8 1022 aa11.71□□□□□ -0.53
SNF8-210ENST00000511214 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
SNF8-210ENST00000511214 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
SNF8-210ENST00000511214 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.54
SNF8-210ENST00000511214 KIF1BO60333 1816 aa11.7□□□□□ -0.54
SNF8-210ENST00000511214 CCDC27Q2M243 656 aa11.7□□□□□ -0.54
SNF8-210ENST00000511214 WDR63Q8IWG1 891 aa11.7□□□□□ -0.54
SNF8-210ENST00000511214 EFCAB6Q5THR3 1501 aa11.7□□□□□ -0.54
SNF8-210ENST00000511214 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
SNF8-210ENST00000511214 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
SNF8-210ENST00000511214 SKAP1Q86WV1 359 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms