RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
SMAD1-209ENST00000511125 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
SMAD1-209ENST00000511125 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
SMAD1-209ENST00000511125 MROH2AA6NES4 1674 aa11.34□□□□□ -0.59
SMAD1-209ENST00000511125 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-209ENST00000511125 PTPRMP28827 1452 aa11.33□□□□□ -0.6
SMAD1-209ENST00000511125 C3P01024 1663 aa11.33□□□□□ -0.6
SMAD1-209ENST00000511125 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
SMAD1-209ENST00000511125 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-209ENST00000511125 EID1Q9Y6B2 187 aa11.33□□□□□ -0.6
SMAD1-209ENST00000511125 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
SMAD1-209ENST00000511125 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
SMAD1-209ENST00000511125 PRAG1Q86YV5 1406 aa11.32□□□□□ -0.6
SMAD1-209ENST00000511125 PIK3C2BO00750 1634 aa11.32□□□□□ -0.6
SMAD1-209ENST00000511125 KIF1BO60333 1816 aa11.32□□□□□ -0.6
SMAD1-209ENST00000511125 RIMS2Q9UQ26 1411 aa11.32□□□□□ -0.6
SMAD1-209ENST00000511125 A2ML1A8K2U0 1454 aa11.31□□□□□ -0.6
SMAD1-209ENST00000511125 USP47Q96K76 1375 aa11.31□□□□□ -0.6
SMAD1-209ENST00000511125 NUTM2FA1L443 756 aa11.3□□□□□ -0.6
SMAD1-209ENST00000511125 WAPLQ7Z5K2 1190 aa11.29□□□□□ -0.6
SMAD1-209ENST00000511125 SPATA31D1Q6ZQQ2 1576 aa11.29□□□□□ -0.6
SMAD1-209ENST00000511125 DIEXFQ68CQ4 756 aaKnown RBP11.29□□□□□ -0.6
SMAD1-209ENST00000511125 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
SMAD1-209ENST00000511125 RPGRIP1LQ68CZ1 1315 aa11.28□□□□□ -0.6
SMAD1-209ENST00000511125 ADAMTSL3P82987 1691 aa11.28□□□□□ -0.6
SMAD1-209ENST00000511125 C14orf93Q9H972 538 aaKnown RBP11.28□□□□□ -0.6
SMAD1-209ENST00000511125 ADGRB3O60242 1522 aa11.28□□□□□ -0.6
SMAD1-209ENST00000511125 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.6
SMAD1-209ENST00000511125 ANKLE2Q86XL3 938 aa11.27□□□□□ -0.61
SMAD1-209ENST00000511125 POGKQ9P215 609 aa11.27□□□□□ -0.61
SMAD1-209ENST00000511125 MINK1Q8N4C8 1332 aaPredicted RBP11.27□□□□□ -0.61
SMAD1-209ENST00000511125 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.61
SMAD1-209ENST00000511125 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMAD1-209ENST00000511125 PRAM1Q96QH2 718 aa11.26□□□□□ -0.61
SMAD1-209ENST00000511125 METP08581 1390 aa11.25□□□□□ -0.61
SMAD1-209ENST00000511125 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
SMAD1-209ENST00000511125 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
SMAD1-209ENST00000511125 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
SMAD1-209ENST00000511125 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
SMAD1-209ENST00000511125 RALGAPBQ86X10 1494 aa11.22□□□□□ -0.61
SMAD1-209ENST00000511125 NLRP1Q9C000 1473 aa11.22□□□□□ -0.61
SMAD1-209ENST00000511125 PIK3C2GO75747 1445 aa11.22□□□□□ -0.61
SMAD1-209ENST00000511125 AMOTL2Q9Y2J4 779 aa11.22□□□□□ -0.61
SMAD1-209ENST00000511125 KIF7Q2M1P5 1343 aa11.21□□□□□ -0.61
SMAD1-209ENST00000511125 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
SMAD1-209ENST00000511125 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
SMAD1-209ENST00000511125 CABP2Q9NPB3 220 aa11.21□□□□□ -0.61
SMAD1-209ENST00000511125 ZFYVE9O95405 1425 aa11.21□□□□□ -0.62
SMAD1-209ENST00000511125 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.62
SMAD1-209ENST00000511125 CEP170BQ9Y4F5 1589 aaPredicted RBP11.2□□□□□ -0.62
SMAD1-209ENST00000511125 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
SMAD1-209ENST00000511125 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
SMAD1-209ENST00000511125 UBR1Q8IWV7 1749 aa11.2□□□□□ -0.62
SMAD1-209ENST00000511125 MYO3AQ8NEV4 1616 aa11.2□□□□□ -0.62
SMAD1-209ENST00000511125 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
SMAD1-209ENST00000511125 PPLO60437 1756 aa11.2□□□□□ -0.62
SMAD1-209ENST00000511125 KCNA6P17658 529 aa11.2□□□□□ -0.62
SMAD1-209ENST00000511125 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
SMAD1-209ENST00000511125 SETD1BQ9UPS6 1966 aaKnown RBP11.19□□□□□ -0.62
SMAD1-209ENST00000511125 TESK2Q96S53 571 aa11.19□□□□□ -0.62
SMAD1-209ENST00000511125 DISP3Q9P2K9 1392 aa11.19□□□□□ -0.62
SMAD1-209ENST00000511125 TRPM1Q7Z4N2 1603 aa11.19□□□□□ -0.62
SMAD1-209ENST00000511125 MIER1Q8N108 512 aa11.19□□□□□ -0.62
SMAD1-209ENST00000511125 MYOM2P54296 1465 aa11.18□□□□□ -0.62
SMAD1-209ENST00000511125 TMF1P82094 1093 aa11.18□□□□□ -0.62
SMAD1-209ENST00000511125 SCAF11Q99590 1463 aaKnown RBP11.17□□□□□ -0.62
SMAD1-209ENST00000511125 ALKQ9UM73 1620 aa11.17□□□□□ -0.62
SMAD1-209ENST00000511125 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
SMAD1-209ENST00000511125 CCDC7Q96M83 1385 aa11.15□□□□□ -0.62
SMAD1-209ENST00000511125 SLC12A5Q9H2X9 1139 aa11.15□□□□□ -0.62
SMAD1-209ENST00000511125 ADAMTS13Q76LX8 1427 aa11.15□□□□□ -0.62
SMAD1-209ENST00000511125 GPRASP1Q5JY77 1395 aa11.15□□□□□ -0.62
SMAD1-209ENST00000511125 PLEKHG1Q9ULL1 1385 aa11.15□□□□□ -0.62
SMAD1-209ENST00000511125 IFT172Q9UG01 1749 aa11.14□□□□□ -0.63
SMAD1-209ENST00000511125 NRXN1Q9ULB1 1477 aa11.14□□□□□ -0.63
SMAD1-209ENST00000511125 TBX22Q9Y458 520 aa11.14□□□□□ -0.63
SMAD1-209ENST00000511125 ROBO2Q9HCK4 1378 aa11.14□□□□□ -0.63
SMAD1-209ENST00000511125 PROSER2Q86WR7 435 aaPredicted RBP11.14□□□□□ -0.63
SMAD1-209ENST00000511125 CDK19Q9BWU1 502 aa11.14□□□□□ -0.63
SMAD1-209ENST00000511125 PANK3Q9H999 370 aa11.13□□□□□ -0.63
SMAD1-209ENST00000511125 EIF3AQ14152 1382 aaKnown RBP11.13□□□□□ -0.63
SMAD1-209ENST00000511125 PTPRUQ92729 1446 aa11.13□□□□□ -0.63
SMAD1-209ENST00000511125 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
SMAD1-209ENST00000511125 ASXL1Q8IXJ9 1541 aa11.13□□□□□ -0.63
SMAD1-209ENST00000511125 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
SMAD1-209ENST00000511125 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
SMAD1-209ENST00000511125 YTHDC1Q96MU7 727 aaKnown RBP11.12□□□□□ -0.63
SMAD1-209ENST00000511125 IQGAP1P46940 1657 aa11.12□□□□□ -0.63
SMAD1-209ENST00000511125 ZNF335Q9H4Z2 1342 aaPredicted RBP11.12□□□□□ -0.63
SMAD1-209ENST00000511125 ADGRB1O14514 1584 aa11.12□□□□□ -0.63
SMAD1-209ENST00000511125 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
SMAD1-209ENST00000511125 TNNT2P45379 298 aaPredicted RBP11.11□□□□□ -0.63
SMAD1-209ENST00000511125 LMTK3Q96Q04 1460 aa11.11□□□□□ -0.63
SMAD1-209ENST00000511125 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
SMAD1-209ENST00000511125 CABP1Q9NZU7 370 aa11.1□□□□□ -0.63
SMAD1-209ENST00000511125 LRPPRCP42704 1394 aaKnown RBP11.1□□□□□ -0.63
SMAD1-209ENST00000511125 SLIT1O75093 1534 aa11.1□□□□□ -0.63
SMAD1-209ENST00000511125 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
SMAD1-209ENST00000511125 NRXN3Q9Y4C0 1643 aa11.09□□□□□ -0.63
SMAD1-209ENST00000511125 NEURL4Q96JN8 1562 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms