RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
LIN54-210ENST00000510877 ARAP3Q8WWN8 1544 aa16.78■□□□□ 0.28
LIN54-210ENST00000510877 NLRP2Q9NX02 1062 aa16.77■□□□□ 0.28
LIN54-210ENST00000510877 ABCC5O15440 1437 aa16.77■□□□□ 0.28
LIN54-210ENST00000510877 NLRP13Q86W25 1043 aa16.77■□□□□ 0.27
LIN54-210ENST00000510877 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.27
LIN54-210ENST00000510877 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
LIN54-210ENST00000510877 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
LIN54-210ENST00000510877 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
LIN54-210ENST00000510877 ANKRD30BQ9BXX2 1392 aa16.75■□□□□ 0.27
LIN54-210ENST00000510877 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
LIN54-210ENST00000510877 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
LIN54-210ENST00000510877 TOM1L2Q6ZVM7 507 aa16.74■□□□□ 0.27
LIN54-210ENST00000510877 CENPJQ9HC77 1338 aaPredicted RBP16.73■□□□□ 0.27
LIN54-210ENST00000510877 COG3Q96JB2 828 aa16.73■□□□□ 0.27
LIN54-210ENST00000510877 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
LIN54-210ENST00000510877 KRT28Q7Z3Y7 464 aa16.73■□□□□ 0.27
LIN54-210ENST00000510877 HFM1A2PYH4 1435 aa16.73■□□□□ 0.27
LIN54-210ENST00000510877 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
LIN54-210ENST00000510877 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
LIN54-210ENST00000510877 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
LIN54-210ENST00000510877 NCOA1Q15788 1441 aa16.72■□□□□ 0.27
LIN54-210ENST00000510877 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
LIN54-210ENST00000510877 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
LIN54-210ENST00000510877 GLI2P10070 1586 aa16.71■□□□□ 0.27
LIN54-210ENST00000510877 RTL5Q5HYW3 569 aaPredicted RBP16.7■□□□□ 0.26
LIN54-210ENST00000510877 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
LIN54-210ENST00000510877 GTF3C3Q9Y5Q9 886 aa16.7■□□□□ 0.26
LIN54-210ENST00000510877 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
LIN54-210ENST00000510877 COL17A1Q9UMD9 1497 aaPredicted RBP16.7■□□□□ 0.26
LIN54-210ENST00000510877 SAMD9Q5K651 1589 aa16.7■□□□□ 0.26
LIN54-210ENST00000510877 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
LIN54-210ENST00000510877 TMEM94Q12767 1356 aa16.69■□□□□ 0.26
LIN54-210ENST00000510877 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
LIN54-210ENST00000510877 LTKP29376 864 aa16.68■□□□□ 0.26
LIN54-210ENST00000510877 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
LIN54-210ENST00000510877 RXRBP28702 533 aa16.68■□□□□ 0.26
LIN54-210ENST00000510877 RAPGEF4Q8WZA2 1011 aa16.67■□□□□ 0.26
LIN54-210ENST00000510877 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
LIN54-210ENST00000510877 HSPA1LP34931 641 aa16.67■□□□□ 0.26
LIN54-210ENST00000510877 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
LIN54-210ENST00000510877 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
LIN54-210ENST00000510877 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
LIN54-210ENST00000510877 CABP2Q9NPB3 220 aa16.65■□□□□ 0.26
LIN54-210ENST00000510877 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
LIN54-210ENST00000510877 ANP32CO43423 234 aa16.63■□□□□ 0.25
LIN54-210ENST00000510877 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
LIN54-210ENST00000510877 USP21Q9UK80 565 aa16.63■□□□□ 0.25
LIN54-210ENST00000510877 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
LIN54-210ENST00000510877 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
LIN54-210ENST00000510877 TMX4Q9H1E5 349 aaPredicted RBP16.62■□□□□ 0.25
LIN54-210ENST00000510877 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
LIN54-210ENST00000510877 TTC37Q6PGP7 1564 aa16.61■□□□□ 0.25
LIN54-210ENST00000510877 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
LIN54-210ENST00000510877 QTRT2Q9H974 415 aaKnown RBP16.6■□□□□ 0.25
LIN54-210ENST00000510877 NUDT16Q96DE0 195 aaKnown RBP16.6■□□□□ 0.25
LIN54-210ENST00000510877 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
LIN54-210ENST00000510877 NBPF14Q5TI25 921 aa16.59■□□□□ 0.25
LIN54-210ENST00000510877 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
LIN54-210ENST00000510877 UGGT1Q9NYU2 1555 aa16.59■□□□□ 0.25
LIN54-210ENST00000510877 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
LIN54-210ENST00000510877 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
LIN54-210ENST00000510877 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
LIN54-210ENST00000510877 PTPN23Q9H3S7 1636 aa16.59■□□□□ 0.25
LIN54-210ENST00000510877 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
LIN54-210ENST00000510877 NPATQ14207 1427 aa16.57■□□□□ 0.24
LIN54-210ENST00000510877 MAP3K1Q13233 1512 aa16.57■□□□□ 0.24
LIN54-210ENST00000510877 ABCA9Q8IUA7 1624 aa16.56■□□□□ 0.24
LIN54-210ENST00000510877 DIEXFQ68CQ4 756 aaKnown RBP16.55■□□□□ 0.24
LIN54-210ENST00000510877 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
LIN54-210ENST00000510877 BAG6P46379 1132 aa16.55■□□□□ 0.24
LIN54-210ENST00000510877 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
LIN54-210ENST00000510877 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
LIN54-210ENST00000510877 SCAF11Q99590 1463 aaKnown RBP16.55■□□□□ 0.24
LIN54-210ENST00000510877 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
LIN54-210ENST00000510877 GTF2E1P29083 439 aaPredicted RBP16.54■□□□□ 0.24
LIN54-210ENST00000510877 DAXXQ9UER7 740 aaPredicted RBP16.54■□□□□ 0.24
LIN54-210ENST00000510877 KCNH5Q8NCM2 988 aa16.54■□□□□ 0.24
LIN54-210ENST00000510877 ADGRF5Q8IZF2 1346 aa16.54■□□□□ 0.24
LIN54-210ENST00000510877 NOS1P29475 1434 aa16.53■□□□□ 0.24
LIN54-210ENST00000510877 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
LIN54-210ENST00000510877 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
LIN54-210ENST00000510877 ORAI2Q96SN7 254 aa16.52■□□□□ 0.24
LIN54-210ENST00000510877 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
LIN54-210ENST00000510877 ABCC1P33527 1531 aa16.52■□□□□ 0.23
LIN54-210ENST00000510877 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.23
LIN54-210ENST00000510877 WASLO00401 505 aaPredicted RBP16.51■□□□□ 0.23
LIN54-210ENST00000510877 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
LIN54-210ENST00000510877 ST20-MTHFSA0A0A6YYL1 179 aa16.51■□□□□ 0.23
LIN54-210ENST00000510877 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
LIN54-210ENST00000510877 EXOC5O00471 708 aa16.5■□□□□ 0.23
LIN54-210ENST00000510877 SAMD9LQ8IVG5 1584 aa16.5■□□□□ 0.23
LIN54-210ENST00000510877 ZRANB1Q9UGI0 708 aa16.49■□□□□ 0.23
LIN54-210ENST00000510877 KDM5DQ9BY66 1539 aa16.48■□□□□ 0.23
LIN54-210ENST00000510877 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
LIN54-210ENST00000510877 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
LIN54-210ENST00000510877 TATP17735 454 aaPredicted RBP16.48■□□□□ 0.23
LIN54-210ENST00000510877 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
LIN54-210ENST00000510877 DDX17Q92841 729 aaKnown RBP16.47■□□□□ 0.23
LIN54-210ENST00000510877 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms