RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 ERBINQ96RT1 1412 aa15.6■□□□□ 0.09
SH3TC2-208ENST00000510779 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
SH3TC2-208ENST00000510779 MCM4P33991 863 aa15.6■□□□□ 0.09
SH3TC2-208ENST00000510779 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
SH3TC2-208ENST00000510779 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
SH3TC2-208ENST00000510779 PLEKHH2Q8IVE3 1493 aa15.59■□□□□ 0.09
SH3TC2-208ENST00000510779 TRAK2O60296 914 aa15.59■□□□□ 0.09
SH3TC2-208ENST00000510779 E9PSI1 815 aa15.59■□□□□ 0.09
SH3TC2-208ENST00000510779 TROQ12816 1431 aaPredicted RBP15.59■□□□□ 0.09
SH3TC2-208ENST00000510779 C9orf84Q5VXU9 1444 aa15.59■□□□□ 0.09
SH3TC2-208ENST00000510779 GPATCH8Q9UKJ3 1502 aaKnown RBP15.58■□□□□ 0.09
SH3TC2-208ENST00000510779 PDZRN3Q9UPQ7 1066 aa15.57■□□□□ 0.08
SH3TC2-208ENST00000510779 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
SH3TC2-208ENST00000510779 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
SH3TC2-208ENST00000510779 ANTXR1Q9H6X2 564 aa15.56■□□□□ 0.08
SH3TC2-208ENST00000510779 TNNQ9UQP3 1299 aa15.56■□□□□ 0.08
SH3TC2-208ENST00000510779 EIF3AQ14152 1382 aaKnown RBP15.56■□□□□ 0.08
SH3TC2-208ENST00000510779 ARHGEF12Q9NZN5 1544 aa15.56■□□□□ 0.08
SH3TC2-208ENST00000510779 TBC1D32Q96NH3 1257 aa15.55■□□□□ 0.08
SH3TC2-208ENST00000510779 ZNF521Q96K83 1311 aa15.55■□□□□ 0.08
SH3TC2-208ENST00000510779 CLCN1P35523 988 aa15.54■□□□□ 0.08
SH3TC2-208ENST00000510779 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
SH3TC2-208ENST00000510779 JPH4Q96JJ6 628 aa15.54■□□□□ 0.08
SH3TC2-208ENST00000510779 NKTRP30414 1462 aaKnown RBP15.54■□□□□ 0.08
SH3TC2-208ENST00000510779 PDE3AQ14432 1141 aa15.54■□□□□ 0.08
SH3TC2-208ENST00000510779 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
SH3TC2-208ENST00000510779 PCDHB15Q9Y5E8 787 aa15.54■□□□□ 0.08
SH3TC2-208ENST00000510779 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
SH3TC2-208ENST00000510779 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
SH3TC2-208ENST00000510779 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
SH3TC2-208ENST00000510779 CHMP5Q9NZZ3 219 aa15.53■□□□□ 0.08
SH3TC2-208ENST00000510779 COL17A1Q9UMD9 1497 aaPredicted RBP15.53■□□□□ 0.08
SH3TC2-208ENST00000510779 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
SH3TC2-208ENST00000510779 MRE11P49959 708 aa15.52■□□□□ 0.08
SH3TC2-208ENST00000510779 HSCBQ8IWL3 235 aa15.52■□□□□ 0.08
SH3TC2-208ENST00000510779 C22orf23Q9BZE7 217 aa15.52■□□□□ 0.08
SH3TC2-208ENST00000510779 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
SH3TC2-208ENST00000510779 ESPNB1AK53 854 aa15.52■□□□□ 0.07
SH3TC2-208ENST00000510779 GRPEL1Q9HAV7 217 aa15.52■□□□□ 0.07
SH3TC2-208ENST00000510779 RWDD1Q9H446 243 aaPredicted RBP15.51■□□□□ 0.07
SH3TC2-208ENST00000510779 RRP9O43818 475 aaKnown RBP15.51■□□□□ 0.07
SH3TC2-208ENST00000510779 CDCA8Q53HL2 280 aa15.51■□□□□ 0.07
SH3TC2-208ENST00000510779 FTSJ3Q8IY81 847 aaKnown RBP15.5■□□□□ 0.07
SH3TC2-208ENST00000510779 RLBP1P12271 317 aa15.5■□□□□ 0.07
SH3TC2-208ENST00000510779 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
SH3TC2-208ENST00000510779 ADGRL2O95490 1459 aa15.49■□□□□ 0.07
SH3TC2-208ENST00000510779 INSRP06213 1382 aa15.48■□□□□ 0.07
SH3TC2-208ENST00000510779 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
SH3TC2-208ENST00000510779 WWC1Q8IX03 1113 aa15.48■□□□□ 0.07
SH3TC2-208ENST00000510779 TRMT2AQ8IZ69 625 aaKnown RBP15.47■□□□□ 0.07
SH3TC2-208ENST00000510779 E9PCH4 1651 aa15.47■□□□□ 0.07
SH3TC2-208ENST00000510779 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
SH3TC2-208ENST00000510779 ARID3AQ99856 593 aa15.47■□□□□ 0.07
SH3TC2-208ENST00000510779 MAGI2Q86UL8 1455 aa15.47■□□□□ 0.07
SH3TC2-208ENST00000510779 DDX11L8A8MPP1 907 aa15.45■□□□□ 0.06
SH3TC2-208ENST00000510779 RARSP54136 660 aaKnown RBP15.45■□□□□ 0.06
SH3TC2-208ENST00000510779 ERBB4Q15303 1308 aa15.44■□□□□ 0.06
SH3TC2-208ENST00000510779 A2MP01023 1474 aa15.44■□□□□ 0.06
SH3TC2-208ENST00000510779 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
SH3TC2-208ENST00000510779 ANP32BQ92688 251 aaKnown RBP15.44■□□□□ 0.06
SH3TC2-208ENST00000510779 ADGBQ8N7X0 1667 aa15.43■□□□□ 0.06
SH3TC2-208ENST00000510779 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
SH3TC2-208ENST00000510779 KDM5DQ9BY66 1539 aa15.42■□□□□ 0.06
SH3TC2-208ENST00000510779 GPRASP1Q5JY77 1395 aa15.42■□□□□ 0.06
SH3TC2-208ENST00000510779 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
SH3TC2-208ENST00000510779 ITPRIPQ8IWB1 547 aa15.42■□□□□ 0.06
SH3TC2-208ENST00000510779 TCP11L2Q8N4U5 519 aa15.42■□□□□ 0.06
SH3TC2-208ENST00000510779 RBM10P98175 930 aaKnown RBP15.41■□□□□ 0.06
SH3TC2-208ENST00000510779 FAM135AQ9P2D6 1515 aa15.41■□□□□ 0.06
SH3TC2-208ENST00000510779 MORC1Q86VD1 984 aa15.41■□□□□ 0.06
SH3TC2-208ENST00000510779 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
SH3TC2-208ENST00000510779 KIAA1211Q6ZU35 1233 aa15.4■□□□□ 0.06
SH3TC2-208ENST00000510779 GAS2L3Q86XJ1 694 aa15.4■□□□□ 0.06
SH3TC2-208ENST00000510779 TNPO1Q92973 898 aaKnown RBP15.39■□□□□ 0.05
SH3TC2-208ENST00000510779 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
SH3TC2-208ENST00000510779 SMC4Q9NTJ3 1288 aa15.38■□□□□ 0.05
SH3TC2-208ENST00000510779 CARMIL2Q6F5E8 1435 aa15.38■□□□□ 0.05
SH3TC2-208ENST00000510779 WDR7Q9Y4E6 1490 aa15.38■□□□□ 0.05
SH3TC2-208ENST00000510779 TRPM1Q7Z4N2 1603 aa15.38■□□□□ 0.05
SH3TC2-208ENST00000510779 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
SH3TC2-208ENST00000510779 DZIP1LQ8IYY4 767 aaKnown RBP15.37■□□□□ 0.05
SH3TC2-208ENST00000510779 NLRP1Q9C000 1473 aa15.37■□□□□ 0.05
SH3TC2-208ENST00000510779 TSR2Q969E8 191 aaKnown RBP15.37■□□□□ 0.05
SH3TC2-208ENST00000510779 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
SH3TC2-208ENST00000510779 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
SH3TC2-208ENST00000510779 ZBTB7CA1YPR0 619 aa15.36■□□□□ 0.05
SH3TC2-208ENST00000510779 MVPQ14764 893 aaKnown RBP15.36■□□□□ 0.05
SH3TC2-208ENST00000510779 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
SH3TC2-208ENST00000510779 PLA2R1Q13018 1463 aa15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 RUNDC1Q96C34 613 aa15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 ABCA8O94911 1581 aa15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 NINLQ9Y2I6 1382 aa15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 NASPP49321 788 aaPredicted RBP15.35■□□□□ 0.05
SH3TC2-208ENST00000510779 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
SH3TC2-208ENST00000510779 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
SH3TC2-208ENST00000510779 DDX49Q9Y6V7 483 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms