RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-209ENST00000510638 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
NFKB1-209ENST00000510638 A2ML1A8K2U0 1454 aa12.51□□□□□ -0.41
NFKB1-209ENST00000510638 E9PCH4 1651 aa12.51□□□□□ -0.41
NFKB1-209ENST00000510638 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
NFKB1-209ENST00000510638 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
NFKB1-209ENST00000510638 TIMELESSQ9UNS1 1208 aa12.5□□□□□ -0.41
NFKB1-209ENST00000510638 TRPM2O94759 1503 aa12.5□□□□□ -0.41
NFKB1-209ENST00000510638 IQGAP1P46940 1657 aa12.49□□□□□ -0.41
NFKB1-209ENST00000510638 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
NFKB1-209ENST00000510638 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
NFKB1-209ENST00000510638 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
NFKB1-209ENST00000510638 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
NFKB1-209ENST00000510638 IDI1Q13907 227 aa12.47□□□□□ -0.41
NFKB1-209ENST00000510638 NLRP1Q9C000 1473 aa12.46□□□□□ -0.42
NFKB1-209ENST00000510638 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
NFKB1-209ENST00000510638 ZNF326Q5BKZ1 582 aaKnown RBP12.45□□□□□ -0.42
NFKB1-209ENST00000510638 MED14O60244 1454 aa12.45□□□□□ -0.42
NFKB1-209ENST00000510638 SPHKAPQ2M3C7 1700 aa12.45□□□□□ -0.42
NFKB1-209ENST00000510638 LRRC7Q96NW7 1537 aa12.43□□□□□ -0.42
NFKB1-209ENST00000510638 STAC3Q96MF2 364 aa12.43□□□□□ -0.42
NFKB1-209ENST00000510638 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
NFKB1-209ENST00000510638 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
NFKB1-209ENST00000510638 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
NFKB1-209ENST00000510638 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
NFKB1-209ENST00000510638 SPATA31E1Q6ZUB1 1445 aa12.42□□□□□ -0.42
NFKB1-209ENST00000510638 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
NFKB1-209ENST00000510638 THEMISQ8N1K5 641 aaPredicted RBP12.41□□□□□ -0.42
NFKB1-209ENST00000510638 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
NFKB1-209ENST00000510638 DCAF11Q8TEB1 546 aa12.4□□□□□ -0.42
NFKB1-209ENST00000510638 SRCAPQ6ZRS2 3230 aa12.4□□□□□ -0.42
NFKB1-209ENST00000510638 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
NFKB1-209ENST00000510638 PIK3C2BO00750 1634 aa12.39□□□□□ -0.43
NFKB1-209ENST00000510638 NPHP4O75161 1426 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-209ENST00000510638 ADGRB3O60242 1522 aa12.38□□□□□ -0.43
NFKB1-209ENST00000510638 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-209ENST00000510638 KDM2AQ9Y2K7 1162 aa12.38□□□□□ -0.43
NFKB1-209ENST00000510638 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
NFKB1-209ENST00000510638 EID1Q9Y6B2 187 aa12.37□□□□□ -0.43
NFKB1-209ENST00000510638 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
NFKB1-209ENST00000510638 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
NFKB1-209ENST00000510638 ANKLE2Q86XL3 938 aa12.36□□□□□ -0.43
NFKB1-209ENST00000510638 TMEM2Q9UHN6 1383 aa12.35□□□□□ -0.43
NFKB1-209ENST00000510638 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
NFKB1-209ENST00000510638 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
NFKB1-209ENST00000510638 TMEM131LA2VDJ0 1609 aa12.33□□□□□ -0.43
NFKB1-209ENST00000510638 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
NFKB1-209ENST00000510638 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
NFKB1-209ENST00000510638 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-209ENST00000510638 KIF1BO60333 1816 aa12.32□□□□□ -0.44
NFKB1-209ENST00000510638 ZFYVE9O95405 1425 aa12.32□□□□□ -0.44
NFKB1-209ENST00000510638 BCANQ96GW7 911 aa12.32□□□□□ -0.44
NFKB1-209ENST00000510638 MYOM2P54296 1465 aa12.32□□□□□ -0.44
NFKB1-209ENST00000510638 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-209ENST00000510638 KDM5AP29375 1690 aaKnown RBP12.31□□□□□ -0.44
NFKB1-209ENST00000510638 SLIT1O75093 1534 aa12.3□□□□□ -0.44
NFKB1-209ENST00000510638 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
NFKB1-209ENST00000510638 PRAG1Q86YV5 1406 aa12.29□□□□□ -0.44
NFKB1-209ENST00000510638 ARHGAP23Q9P227 1491 aa12.29□□□□□ -0.44
NFKB1-209ENST00000510638 NEXMIFQ5QGS0 1516 aa12.29□□□□□ -0.44
NFKB1-209ENST00000510638 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
NFKB1-209ENST00000510638 SCAF11Q99590 1463 aaKnown RBP12.28□□□□□ -0.44
NFKB1-209ENST00000510638 LTKP29376 864 aa12.28□□□□□ -0.44
NFKB1-209ENST00000510638 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
NFKB1-209ENST00000510638 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
NFKB1-209ENST00000510638 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
NFKB1-209ENST00000510638 PIK3C2GO75747 1445 aa12.27□□□□□ -0.45
NFKB1-209ENST00000510638 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.45
NFKB1-209ENST00000510638 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
NFKB1-209ENST00000510638 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
NFKB1-209ENST00000510638 C14orf93Q9H972 538 aaKnown RBP12.26□□□□□ -0.45
NFKB1-209ENST00000510638 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
NFKB1-209ENST00000510638 JCADQ9P266 1359 aa12.25□□□□□ -0.45
NFKB1-209ENST00000510638 COL16A1Q07092 1604 aaPredicted RBP12.24□□□□□ -0.45
NFKB1-209ENST00000510638 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
NFKB1-209ENST00000510638 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
NFKB1-209ENST00000510638 TBX22Q9Y458 520 aa12.22□□□□□ -0.45
NFKB1-209ENST00000510638 PPLO60437 1756 aa12.22□□□□□ -0.45
NFKB1-209ENST00000510638 NBPF1Q3BBV0 1214 aa12.21□□□□□ -0.45
NFKB1-209ENST00000510638 SLC26A8Q96RN1 970 aa12.21□□□□□ -0.45
NFKB1-209ENST00000510638 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
NFKB1-209ENST00000510638 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
NFKB1-209ENST00000510638 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
NFKB1-209ENST00000510638 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
NFKB1-209ENST00000510638 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
NFKB1-209ENST00000510638 LRP5O75197 1615 aa12.19□□□□□ -0.46
NFKB1-209ENST00000510638 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
NFKB1-209ENST00000510638 EIF3AQ14152 1382 aaKnown RBP12.18□□□□□ -0.46
NFKB1-209ENST00000510638 MYO5BQ9ULV0 1848 aa12.18□□□□□ -0.46
NFKB1-209ENST00000510638 RXRBP28702 533 aa12.18□□□□□ -0.46
NFKB1-209ENST00000510638 ADAMTS13Q76LX8 1427 aa12.18□□□□□ -0.46
NFKB1-209ENST00000510638 LRP6O75581 1613 aa12.18□□□□□ -0.46
NFKB1-209ENST00000510638 LAMC1P11047 1609 aa12.18□□□□□ -0.46
NFKB1-209ENST00000510638 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
NFKB1-209ENST00000510638 STK26Q9P289 416 aa12.17□□□□□ -0.46
NFKB1-209ENST00000510638 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
NFKB1-209ENST00000510638 DIP2AQ14689 1571 aa12.17□□□□□ -0.46
NFKB1-209ENST00000510638 USP47Q96K76 1375 aa12.17□□□□□ -0.46
NFKB1-209ENST00000510638 METP08581 1390 aa12.16□□□□□ -0.46
NFKB1-209ENST00000510638 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms