RNA–Protein interactions for RNA: ENST00000510410.5

ACSF2-218, Transcript of acyl-CoA synthetase family member 2, human

TSL 2

Gene ACSF2, Length 1,745 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-218	ENST00000510410	SYNM	O15061	1565 aa		33.82	■■■■□ 3.01
ACSF2-218	ENST00000510410	KTN1	Q86UP2	1357 aa	Known RBP	33.82	■■■■□ 3
ACSF2-218	ENST00000510410	TMF1	P82094	1093 aa		33.82	■■■■□ 3
ACSF2-218	ENST00000510410	PPL	O60437	1756 aa		33.81	■■■■□ 3
ACSF2-218	ENST00000510410	POLR3GL	Q9BT43	218 aa		33.81	■■■■□ 3
ACSF2-218	ENST00000510410	CFAP65	Q6ZU64	1925 aa	Known RBP	33.8	■■■■□ 3
ACSF2-218	ENST00000510410	EIF3A	Q14152	1382 aa	Known RBP	33.79	■■■■□ 3
ACSF2-218	ENST00000510410	SLC24A1	O60721	1099 aa		33.78	■■■■□ 3
ACSF2-218	ENST00000510410	SLC52A1	Q9NWF4	448 aa		33.78	■■■■□ 3
ACSF2-218	ENST00000510410	SETBP1	Q9Y6X0	1596 aa		33.77	■■■■□ 3
ACSF2-218	ENST00000510410	ADGRF5	Q8IZF2	1346 aa		33.77	■■■■□ 3
ACSF2-218	ENST00000510410	DISP3	Q9P2K9	1392 aa		33.75	■■■□□ 2.99
ACSF2-218	ENST00000510410	ARHGEF40	Q8TER5	1519 aa		33.75	■■■□□ 2.99
ACSF2-218	ENST00000510410	PREX1	Q8TCU6	1659 aa		33.73	■■■□□ 2.99
ACSF2-218	ENST00000510410	PIK3C2G	O75747	1445 aa		33.72	■■■□□ 2.99
ACSF2-218	ENST00000510410	CDCA8	Q53HL2	280 aa		33.7	■■■□□ 2.99
ACSF2-218	ENST00000510410	CFAP70	Q5T0N1	1121 aa		33.68	■■■□□ 2.98
ACSF2-218	ENST00000510410	CHGA	P10645	457 aa	Known RBP	33.67	■■■□□ 2.98
ACSF2-218	ENST00000510410	ZFYVE9	O95405	1425 aa		33.67	■■■□□ 2.98
ACSF2-218	ENST00000510410	RALBP1	Q15311	655 aa		33.67	■■■□□ 2.98
ACSF2-218	ENST00000510410	MRS2	Q9HD23	443 aa		33.67	■■■□□ 2.98
ACSF2-218	ENST00000510410	C14orf93	Q9H972	538 aa	Known RBP	33.65	■■■□□ 2.98
ACSF2-218	ENST00000510410	NEXMIF	Q5QGS0	1516 aa		33.65	■■■□□ 2.98
ACSF2-218	ENST00000510410	MYO3A	Q8NEV4	1616 aa		33.65	■■■□□ 2.98
ACSF2-218	ENST00000510410	CCDC184	Q52MB2	194 aa		33.65	■■■□□ 2.98
ACSF2-218	ENST00000510410	PER1	O15534	1290 aa	Predicted RBP	33.63	■■■□□ 2.97
ACSF2-218	ENST00000510410	IDI1	Q13907	227 aa		33.63	■■■□□ 2.97
ACSF2-218	ENST00000510410	SBNO2	Q9Y2G9	1366 aa		33.62	■■■□□ 2.97
ACSF2-218	ENST00000510410	VGF	O15240	615 aa	Predicted RBP	33.62	■■■□□ 2.97
ACSF2-218	ENST00000510410	ERVK-7	P63135	1459 aa		33.61	■■■□□ 2.97
ACSF2-218	ENST00000510410	TMEM131L	A2VDJ0	1609 aa		33.58	■■■□□ 2.97
ACSF2-218	ENST00000510410	ADGRB1	O14514	1584 aa		33.58	■■■□□ 2.97
ACSF2-218	ENST00000510410	CLTC	Q00610	1675 aa	Known RBP	33.54	■■■□□ 2.96
ACSF2-218	ENST00000510410	PARD3	Q8TEW0	1356 aa		33.54	■■■□□ 2.96
ACSF2-218	ENST00000510410	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.54	■■■□□ 2.96
ACSF2-218	ENST00000510410	SPATA31D1	Q6ZQQ2	1576 aa		33.54	■■■□□ 2.96
ACSF2-218	ENST00000510410	BRD4	O60885	1362 aa	Predicted RBP	33.53	■■■□□ 2.96
ACSF2-218	ENST00000510410	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.52	■■■□□ 2.96
ACSF2-218	ENST00000510410	PANK3	Q9H999	370 aa		33.5	■■■□□ 2.95
ACSF2-218	ENST00000510410	KDM5A	P29375	1690 aa	Known RBP	33.5	■■■□□ 2.95
ACSF2-218	ENST00000510410	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.46	■■■□□ 2.95
ACSF2-218	ENST00000510410	FAM9B	Q8IZU0	186 aa		33.45	■■■□□ 2.95
ACSF2-218	ENST00000510410	MYO5B	Q9ULV0	1848 aa		33.45	■■■□□ 2.95
ACSF2-218	ENST00000510410	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.44	■■■□□ 2.94
ACSF2-218	ENST00000510410	MYOM1	P52179	1685 aa		33.43	■■■□□ 2.94
ACSF2-218	ENST00000510410	NLRP13	Q86W25	1043 aa		33.41	■■■□□ 2.94
ACSF2-218	ENST00000510410	TMC1	Q8TDI8	760 aa		33.41	■■■□□ 2.94
ACSF2-218	ENST00000510410	PNISR	Q8TF01	805 aa	Known RBP	33.41	■■■□□ 2.94
ACSF2-218	ENST00000510410	ZBED9	Q6R2W3	1325 aa		33.4	■■■□□ 2.94
ACSF2-218	ENST00000510410	NPC1L1	Q9UHC9	1359 aa		33.39	■■■□□ 2.94
ACSF2-218	ENST00000510410	PUS7	Q96PZ0	661 aa	Known RBP	33.36	■■■□□ 2.93
ACSF2-218	ENST00000510410	LRPPRC	P42704	1394 aa	Known RBP	33.36	■■■□□ 2.93
ACSF2-218	ENST00000510410	QRICH2	Q9H0J4	1663 aa		33.35	■■■□□ 2.93
ACSF2-218	ENST00000510410	ZMYM3	Q14202	1370 aa		33.34	■■■□□ 2.93
ACSF2-218	ENST00000510410	ESF1	Q9H501	851 aa	Known RBP	33.33	■■■□□ 2.93
ACSF2-218	ENST00000510410	KNSTRN	Q9Y448	316 aa		33.33	■■■□□ 2.93
ACSF2-218	ENST00000510410	A2ML1	A8K2U0	1454 aa		33.33	■■■□□ 2.93
ACSF2-218	ENST00000510410	TRAK1	Q9UPV9	953 aa		33.33	■■■□□ 2.93
ACSF2-218	ENST00000510410	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.32	■■■□□ 2.92
ACSF2-218	ENST00000510410	MLEC	Q14165	292 aa		33.31	■■■□□ 2.92
ACSF2-218	ENST00000510410	ASXL1	Q8IXJ9	1541 aa		33.31	■■■□□ 2.92
ACSF2-218	ENST00000510410	TMEM132E	Q6IEE7	984 aa		33.31	■■■□□ 2.92
ACSF2-218	ENST00000510410	CNGB1	Q14028	1251 aa	Predicted RBP	33.3	■■■□□ 2.92
ACSF2-218	ENST00000510410	INSR	P06213	1382 aa		33.29	■■■□□ 2.92
ACSF2-218	ENST00000510410	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.28	■■■□□ 2.92
ACSF2-218	ENST00000510410	STAG3	Q9UJ98	1225 aa		33.28	■■■□□ 2.92
ACSF2-218	ENST00000510410	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.26	■■■□□ 2.92
ACSF2-218	ENST00000510410	CC2D1B	Q5T0F9	858 aa	Known RBP	33.24	■■■□□ 2.91
ACSF2-218	ENST00000510410	SUPT16H	Q9Y5B9	1047 aa	Known RBP	33.23	■■■□□ 2.91
ACSF2-218	ENST00000510410	ALK	Q9UM73	1620 aa		33.22	■■■□□ 2.91
ACSF2-218	ENST00000510410	RIMS2	Q9UQ26	1411 aa		33.21	■■■□□ 2.91
ACSF2-218	ENST00000510410	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.18	■■■□□ 2.9
ACSF2-218	ENST00000510410	EVC2	Q86UK5	1308 aa		33.18	■■■□□ 2.9
ACSF2-218	ENST00000510410	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.17	■■■□□ 2.9
ACSF2-218	ENST00000510410	TNR	Q92752	1358 aa		33.17	■■■□□ 2.9
ACSF2-218	ENST00000510410	PTPRM	P28827	1452 aa		33.15	■■■□□ 2.9
ACSF2-218	ENST00000510410	TULP4	Q9NRJ4	1543 aa		33.13	■■■□□ 2.89
ACSF2-218	ENST00000510410	HDGF	P51858	240 aa	Known RBP	33.13	■■■□□ 2.89
ACSF2-218	ENST00000510410	DLC1	Q96QB1	1528 aa		33.12	■■■□□ 2.89
ACSF2-218	ENST00000510410	NEFL	P07196	543 aa		33.11	■■■□□ 2.89
ACSF2-218	ENST00000510410	PPP2R1A	P30153	589 aa		33.1	■■■□□ 2.89
ACSF2-218	ENST00000510410	SETD1A	O15047	1707 aa	Known RBP	33.1	■■■□□ 2.89
ACSF2-218	ENST00000510410	CARD14	Q9BXL6	1004 aa		33.09	■■■□□ 2.89
ACSF2-218	ENST00000510410	NINL	Q9Y2I6	1382 aa		33.09	■■■□□ 2.89
ACSF2-218	ENST00000510410	USP32	Q8NFA0	1604 aa		33.08	■■■□□ 2.89
ACSF2-218	ENST00000510410	NLRP1	Q9C000	1473 aa		33.07	■■■□□ 2.88
ACSF2-218	ENST00000510410	SMG6	Q86US8	1419 aa	Known RBP	33.05	■■■□□ 2.88
ACSF2-218	ENST00000510410	UBR1	Q8IWV7	1749 aa		33.04	■■■□□ 2.88
ACSF2-218	ENST00000510410	BLM	P54132	1417 aa	Predicted RBP	33.03	■■■□□ 2.88
ACSF2-218	ENST00000510410	ABCC11	Q96J66	1382 aa		33.02	■■■□□ 2.88
ACSF2-218	ENST00000510410	NRXN3	Q9Y4C0	1643 aa		33.02	■■■□□ 2.88
ACSF2-218	ENST00000510410	TRH	P20396	242 aa	Predicted RBP	33.02	■■■□□ 2.88
ACSF2-218	ENST00000510410	FKBP8	Q14318	412 aa		33.01	■■■□□ 2.87
ACSF2-218	ENST00000510410	STK26	Q9P289	416 aa		33.01	■■■□□ 2.87
ACSF2-218	ENST00000510410	ANKRD36B	Q8N2N9	1353 aa		33	■■■□□ 2.87
ACSF2-218	ENST00000510410	SLC12A5	Q9H2X9	1139 aa		32.99	■■■□□ 2.87
ACSF2-218	ENST00000510410	TMEM2	Q9UHN6	1383 aa		32.99	■■■□□ 2.87
ACSF2-218	ENST00000510410	ATAD2	Q6PL18	1390 aa		32.98	■■■□□ 2.87
ACSF2-218	ENST00000510410	PRAM1	Q96QH2	718 aa		32.98	■■■□□ 2.87
ACSF2-218	ENST00000510410	NSD3	Q9BZ95	1437 aa		32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms