RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 RNF40O75150 1001 aa12.46□□□□□ -0.41
SSBP2-214ENST00000510060 WBP1LQ9NX94 342 aa12.46□□□□□ -0.41
SSBP2-214ENST00000510060 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
SSBP2-214ENST00000510060 IRF6O14896 467 aa12.41□□□□□ -0.42
SSBP2-214ENST00000510060 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
SSBP2-214ENST00000510060 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
SSBP2-214ENST00000510060 RSPH4AQ5TD94 716 aa12.39□□□□□ -0.43
SSBP2-214ENST00000510060 ZMYND10O75800 440 aa12.38□□□□□ -0.43
SSBP2-214ENST00000510060 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
SSBP2-214ENST00000510060 KRI1Q8N9T8 703 aaKnown RBP12.38□□□□□ -0.43
SSBP2-214ENST00000510060 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
SSBP2-214ENST00000510060 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
SSBP2-214ENST00000510060 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
SSBP2-214ENST00000510060 SULF1Q8IWU6 871 aa12.34□□□□□ -0.43
SSBP2-214ENST00000510060 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
SSBP2-214ENST00000510060 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
SSBP2-214ENST00000510060 IFFO2Q5TF58 517 aa12.32□□□□□ -0.44
SSBP2-214ENST00000510060 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
SSBP2-214ENST00000510060 APLP1P51693 650 aa12.3□□□□□ -0.44
SSBP2-214ENST00000510060 CFHP08603 1231 aa12.28□□□□□ -0.44
SSBP2-214ENST00000510060 KCNC4Q03721 635 aa12.28□□□□□ -0.44
SSBP2-214ENST00000510060 CLCN1P35523 988 aa12.27□□□□□ -0.45
SSBP2-214ENST00000510060 RDH13Q8NBN7 331 aa12.27□□□□□ -0.45
SSBP2-214ENST00000510060 DDX11L8A8MPP1 907 aa12.26□□□□□ -0.45
SSBP2-214ENST00000510060 SLC10A3P09131 477 aa12.26□□□□□ -0.45
SSBP2-214ENST00000510060 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
SSBP2-214ENST00000510060 IL21Q9HBE4 155 aa12.26□□□□□ -0.45
SSBP2-214ENST00000510060 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
SSBP2-214ENST00000510060 ACTN4O43707 911 aaKnown RBP12.24□□□□□ -0.45
SSBP2-214ENST00000510060 AK7Q96M32 723 aa12.24□□□□□ -0.45
SSBP2-214ENST00000510060 MTRQ99707 1265 aa12.24□□□□□ -0.45
SSBP2-214ENST00000510060 GPCPD1Q9NPB8 672 aa12.24□□□□□ -0.45
SSBP2-214ENST00000510060 PCDHB3Q9Y5E6 796 aa12.24□□□□□ -0.45
SSBP2-214ENST00000510060 TJAP1Q5JTD0 557 aa12.22□□□□□ -0.45
SSBP2-214ENST00000510060 AMHR2Q16671 573 aa12.21□□□□□ -0.45
SSBP2-214ENST00000510060 GCGRP47871 477 aa12.18□□□□□ -0.46
SSBP2-214ENST00000510060 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
SSBP2-214ENST00000510060 CD46P15529 392 aa12.17□□□□□ -0.46
SSBP2-214ENST00000510060 COPS2P61201 443 aa12.17□□□□□ -0.46
SSBP2-214ENST00000510060 A0A0G2JS52 829 aa12.16□□□□□ -0.46
SSBP2-214ENST00000510060 NR1I2O75469 434 aa12.16□□□□□ -0.46
SSBP2-214ENST00000510060 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
SSBP2-214ENST00000510060 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
SSBP2-214ENST00000510060 TRIM66O15016 1216 aa12.15□□□□□ -0.46
SSBP2-214ENST00000510060 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
SSBP2-214ENST00000510060 BLOC1S3Q6QNY0 202 aa12.15□□□□□ -0.46
SSBP2-214ENST00000510060 ZPR1O75312 459 aa12.14□□□□□ -0.47
SSBP2-214ENST00000510060 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
SSBP2-214ENST00000510060 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
SSBP2-214ENST00000510060 ZNF516Q92618 1163 aa12.12□□□□□ -0.47
SSBP2-214ENST00000510060 RGS20O76081 388 aa12.11□□□□□ -0.47
SSBP2-214ENST00000510060 USP46P62068 366 aa12.11□□□□□ -0.47
SSBP2-214ENST00000510060 FUT2Q10981 343 aa12.11□□□□□ -0.47
SSBP2-214ENST00000510060 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
SSBP2-214ENST00000510060 NISCHQ9Y2I1 1504 aa12.1□□□□□ -0.47
SSBP2-214ENST00000510060 KDM4AO75164 1064 aa12.09□□□□□ -0.47
SSBP2-214ENST00000510060 SSTR3P32745 418 aaPredicted RBP12.09□□□□□ -0.47
SSBP2-214ENST00000510060 GGCXP38435 758 aa12.09□□□□□ -0.47
SSBP2-214ENST00000510060 REPIN1Q9BWE0 567 aaKnown RBP12.08□□□□□ -0.48
SSBP2-214ENST00000510060 PDE4DQ08499 809 aa12.07□□□□□ -0.48
SSBP2-214ENST00000510060 MORN1Q5T089 497 aa12.07□□□□□ -0.48
SSBP2-214ENST00000510060 PARP9Q8IXQ6 854 aa12.07□□□□□ -0.48
SSBP2-214ENST00000510060 PUS10Q3MIT2 529 aaKnown RBP12.06□□□□□ -0.48
SSBP2-214ENST00000510060 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
SSBP2-214ENST00000510060 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
SSBP2-214ENST00000510060 ADH1BP00325 375 aa12.04□□□□□ -0.48
SSBP2-214ENST00000510060 Q3C1V9 767 aa12.03□□□□□ -0.48
SSBP2-214ENST00000510060 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
SSBP2-214ENST00000510060 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
SSBP2-214ENST00000510060 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
SSBP2-214ENST00000510060 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.02□□□□□ -0.49
SSBP2-214ENST00000510060 TLL1O43897 1013 aa12.01□□□□□ -0.49
SSBP2-214ENST00000510060 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
SSBP2-214ENST00000510060 SLC27A5Q9Y2P5 690 aa12.01□□□□□ -0.49
SSBP2-214ENST00000510060 HOXA2O43364 376 aa12□□□□□ -0.49
SSBP2-214ENST00000510060 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
SSBP2-214ENST00000510060 SPSB2Q99619 263 aa12□□□□□ -0.49
SSBP2-214ENST00000510060 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
SSBP2-214ENST00000510060 SLC6A16Q9GZN6 736 aa11.97□□□□□ -0.49
SSBP2-214ENST00000510060 THAP11Q96EK4 314 aa11.96□□□□□ -0.49
SSBP2-214ENST00000510060 MS4A1P11836 297 aa11.95□□□□□ -0.5
SSBP2-214ENST00000510060 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
SSBP2-214ENST00000510060 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
SSBP2-214ENST00000510060 S1PR4O95977 384 aa11.93□□□□□ -0.5
SSBP2-214ENST00000510060 TPRNQ4KMQ1 711 aa11.92□□□□□ -0.5
SSBP2-214ENST00000510060 MSS51Q4VC12 460 aa11.92□□□□□ -0.5
SSBP2-214ENST00000510060 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
SSBP2-214ENST00000510060 FDX1P10109 184 aa11.91□□□□□ -0.5
SSBP2-214ENST00000510060 GJA5P36382 358 aa11.91□□□□□ -0.5
SSBP2-214ENST00000510060 RNF19BQ6ZMZ0 732 aa11.91□□□□□ -0.5
SSBP2-214ENST00000510060 TBC1D2Q9BYX2 928 aa11.91□□□□□ -0.5
SSBP2-214ENST00000510060 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
SSBP2-214ENST00000510060 HLA-CQ95604 372 aa11.89□□□□□ -0.51
SSBP2-214ENST00000510060 USB1Q9BQ65 265 aaKnown RBP11.89□□□□□ -0.51
SSBP2-214ENST00000510060 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
SSBP2-214ENST00000510060 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
SSBP2-214ENST00000510060 FAM160A2Q8N612 972 aaPredicted RBP11.87□□□□□ -0.51
SSBP2-214ENST00000510060 RSPH6AQ9H0K4 717 aa11.87□□□□□ -0.51
SSBP2-214ENST00000510060 KDM4CQ9H3R0 1056 aa11.87□□□□□ -0.51
SSBP2-214ENST00000510060 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms