RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 DIP2CQ9Y2E4 1556 aa9.67□□□□□ -0.86
MATR3-215ENST00000510056 ARHGAP5Q13017 1502 aa9.67□□□□□ -0.86
MATR3-215ENST00000510056 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
MATR3-215ENST00000510056 HSPA1LP34931 641 aa9.66□□□□□ -0.86
MATR3-215ENST00000510056 KIF14Q15058 1648 aa9.66□□□□□ -0.86
MATR3-215ENST00000510056 TRIM66O15016 1216 aa9.65□□□□□ -0.86
MATR3-215ENST00000510056 ABCA6Q8N139 1617 aa9.65□□□□□ -0.86
MATR3-215ENST00000510056 UNCXA6NJT0 531 aa9.64□□□□□ -0.87
MATR3-215ENST00000510056 AK7Q96M32 723 aa9.64□□□□□ -0.87
MATR3-215ENST00000510056 KDM5CP41229 1560 aa9.63□□□□□ -0.87
MATR3-215ENST00000510056 MED1Q15648 1581 aaPredicted RBP9.63□□□□□ -0.87
MATR3-215ENST00000510056 BRPF3Q9ULD4 1205 aa9.62□□□□□ -0.87
MATR3-215ENST00000510056 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
MATR3-215ENST00000510056 ZMYM3Q14202 1370 aa9.61□□□□□ -0.87
MATR3-215ENST00000510056 SUPT6HQ7KZ85 1726 aaKnown RBP9.6□□□□□ -0.87
MATR3-215ENST00000510056 MLH3Q9UHC1 1453 aa9.6□□□□□ -0.87
MATR3-215ENST00000510056 CDC42BPBQ9Y5S2 1711 aa9.59□□□□□ -0.87
MATR3-215ENST00000510056 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
MATR3-215ENST00000510056 CNTLNQ9NXG0 1405 aa9.59□□□□□ -0.87
MATR3-215ENST00000510056 AGLP35573 1532 aa9.59□□□□□ -0.88
MATR3-215ENST00000510056 TROQ12816 1431 aaPredicted RBP9.58□□□□□ -0.88
MATR3-215ENST00000510056 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
MATR3-215ENST00000510056 TOM1O60784 492 aa9.58□□□□□ -0.88
MATR3-215ENST00000510056 GGT6Q6P531 493 aa9.58□□□□□ -0.88
MATR3-215ENST00000510056 ARHGEF1Q92888 912 aaKnown RBP9.58□□□□□ -0.88
MATR3-215ENST00000510056 CLIP1P30622 1438 aa9.58□□□□□ -0.88
MATR3-215ENST00000510056 PDE4CQ08493 712 aa9.57□□□□□ -0.88
MATR3-215ENST00000510056 NPATQ14207 1427 aa9.57□□□□□ -0.88
MATR3-215ENST00000510056 CLTCQ00610 1675 aaKnown RBP9.56□□□□□ -0.88
MATR3-215ENST00000510056 MCM6Q14566 821 aa9.56□□□□□ -0.88
MATR3-215ENST00000510056 MYO3AQ8NEV4 1616 aa9.56□□□□□ -0.88
MATR3-215ENST00000510056 FMN1Q68DA7 1419 aa9.56□□□□□ -0.88
MATR3-215ENST00000510056 HNRNPMP52272 730 aaKnown RBP eCLIP9.56□□□□□ -0.884e-9■■■■■ 28.9
MATR3-215ENST00000510056 E2F4Q16254 413 aa9.56□□□□□ -0.88
MATR3-215ENST00000510056 ITSN2Q9NZM3 1697 aa9.55□□□□□ -0.88
MATR3-215ENST00000510056 ABCC1P33527 1531 aa9.55□□□□□ -0.88
MATR3-215ENST00000510056 CEP170BQ9Y4F5 1589 aaPredicted RBP9.55□□□□□ -0.88
MATR3-215ENST00000510056 LRRIQ1Q96JM4 1722 aa9.55□□□□□ -0.88
MATR3-215ENST00000510056 SPAG9O60271 1321 aaKnown RBP9.54□□□□□ -0.88
MATR3-215ENST00000510056 CCDC97Q96F63 343 aaPredicted RBP9.54□□□□□ -0.88
MATR3-215ENST00000510056 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
MATR3-215ENST00000510056 TCOF1Q13428 1488 aaKnown RBP9.54□□□□□ -0.88
MATR3-215ENST00000510056 MROH2AA6NES4 1674 aa9.54□□□□□ -0.88
MATR3-215ENST00000510056 PLA2R1Q13018 1463 aa9.53□□□□□ -0.88
MATR3-215ENST00000510056 SMARCA5O60264 1052 aaPredicted RBP9.53□□□□□ -0.88
MATR3-215ENST00000510056 PPP1R37O75864 691 aa9.53□□□□□ -0.88
MATR3-215ENST00000510056 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
MATR3-215ENST00000510056 ARHGAP35Q9NRY4 1499 aa9.53□□□□□ -0.88
MATR3-215ENST00000510056 PREX2Q70Z35 1606 aa9.53□□□□□ -0.88
MATR3-215ENST00000510056 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
MATR3-215ENST00000510056 ZNF142P52746 1687 aaPredicted RBP9.52□□□□□ -0.89
MATR3-215ENST00000510056 EEA1Q15075 1411 aa9.52□□□□□ -0.89
MATR3-215ENST00000510056 FLIIQ13045 1269 aa9.52□□□□□ -0.89
MATR3-215ENST00000510056 PROSER2Q86WR7 435 aaPredicted RBP9.52□□□□□ -0.89
MATR3-215ENST00000510056 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
MATR3-215ENST00000510056 SAMD9LQ8IVG5 1584 aa9.52□□□□□ -0.89
MATR3-215ENST00000510056 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
MATR3-215ENST00000510056 A6NJR5 290 aa9.51□□□□□ -0.89
MATR3-215ENST00000510056 DCAF8Q5TAQ9 597 aa9.51□□□□□ -0.89
MATR3-215ENST00000510056 FBXO31Q5XUX0 539 aaPredicted RBP9.51□□□□□ -0.89
MATR3-215ENST00000510056 SHANK2Q9UPX8 1470 aa9.51□□□□□ -0.89
MATR3-215ENST00000510056 KDM4AO75164 1064 aa9.5□□□□□ -0.89
MATR3-215ENST00000510056 SYCP2Q9BX26 1530 aa9.5□□□□□ -0.89
MATR3-215ENST00000510056 CDC42BPAQ5VT25 1732 aa9.5□□□□□ -0.89
MATR3-215ENST00000510056 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
MATR3-215ENST00000510056 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
MATR3-215ENST00000510056 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
MATR3-215ENST00000510056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.49□□□□□ -0.895e-19■■□□□ 13.5
MATR3-215ENST00000510056 A2ML1A8K2U0 1454 aa9.48□□□□□ -0.89
MATR3-215ENST00000510056 A2MP01023 1474 aa9.48□□□□□ -0.89
MATR3-215ENST00000510056 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
MATR3-215ENST00000510056 ZNF592Q92610 1267 aa9.48□□□□□ -0.89
MATR3-215ENST00000510056 RGS17Q9UGC6 210 aaPredicted RBP9.48□□□□□ -0.89
MATR3-215ENST00000510056 CPS1P31327 1500 aa9.48□□□□□ -0.89
MATR3-215ENST00000510056 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
MATR3-215ENST00000510056 PARP9Q8IXQ6 854 aa9.48□□□□□ -0.89
MATR3-215ENST00000510056 POLR1AO95602 1720 aaPredicted RBP9.47□□□□□ -0.89
MATR3-215ENST00000510056 NEURL4Q96JN8 1562 aa9.47□□□□□ -0.89
MATR3-215ENST00000510056 ANKLE2Q86XL3 938 aa9.47□□□□□ -0.89
MATR3-215ENST00000510056 STAG3Q9UJ98 1225 aa9.47□□□□□ -0.89
MATR3-215ENST00000510056 ALKQ9UM73 1620 aa9.47□□□□□ -0.89
MATR3-215ENST00000510056 PYGBP11216 843 aa9.46□□□□□ -0.89
MATR3-215ENST00000510056 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
MATR3-215ENST00000510056 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
MATR3-215ENST00000510056 TNRQ92752 1358 aa9.45□□□□□ -0.9
MATR3-215ENST00000510056 RSPH4AQ5TD94 716 aa9.45□□□□□ -0.9
MATR3-215ENST00000510056 PLXNC1O60486 1568 aa9.45□□□□□ -0.9
MATR3-215ENST00000510056 NUBP1P53384 320 aa9.45□□□□□ -0.9
MATR3-215ENST00000510056 ARIH1Q9Y4X5 557 aaPredicted RBP9.45□□□□□ -0.9
MATR3-215ENST00000510056 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
MATR3-215ENST00000510056 GPATCH8Q9UKJ3 1502 aaKnown RBP9.44□□□□□ -0.9
MATR3-215ENST00000510056 ZNF644Q9H582 1327 aaPredicted RBP9.44□□□□□ -0.9
MATR3-215ENST00000510056 KIF3BO15066 747 aa9.43□□□□□ -0.9
MATR3-215ENST00000510056 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
MATR3-215ENST00000510056 INO80Q9ULG1 1556 aaPredicted RBP9.43□□□□□ -0.9
MATR3-215ENST00000510056 THEMISQ8N1K5 641 aaPredicted RBP9.43□□□□□ -0.9
MATR3-215ENST00000510056 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
MATR3-215ENST00000510056 CCDC18Q5T9S5 1454 aa9.43□□□□□ -0.9
MATR3-215ENST00000510056 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
MATR3-215ENST00000510056 CASKIN1Q8WXD9 1431 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms