RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 IQGAP3Q86VI3 1631 aa15.46■□□□□ 0.06
SCARB2-204ENST00000509994 XIRP1Q702N8 1843 aaKnown RBP15.45■□□□□ 0.06
SCARB2-204ENST00000509994 NUP155O75694 1391 aa15.43■□□□□ 0.06
SCARB2-204ENST00000509994 MED1Q15648 1581 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-204ENST00000509994 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
SCARB2-204ENST00000509994 HDGFP51858 240 aaKnown RBP15.42■□□□□ 0.06
SCARB2-204ENST00000509994 TMEM131LA2VDJ0 1609 aa15.42■□□□□ 0.06
SCARB2-204ENST00000509994 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
SCARB2-204ENST00000509994 PROSER2Q86WR7 435 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-204ENST00000509994 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
SCARB2-204ENST00000509994 KCNA6P17658 529 aa15.39■□□□□ 0.05
SCARB2-204ENST00000509994 NUTM2DQ5VT03 806 aaPredicted RBP15.39■□□□□ 0.05
SCARB2-204ENST00000509994 RBM33Q96EV2 1170 aaKnown RBP15.39■□□□□ 0.05
SCARB2-204ENST00000509994 SPHKAPQ2M3C7 1700 aa15.38■□□□□ 0.05
SCARB2-204ENST00000509994 SOCS7O14512 581 aa15.38■□□□□ 0.05
SCARB2-204ENST00000509994 PLEKHG1Q9ULL1 1385 aa15.37■□□□□ 0.05
SCARB2-204ENST00000509994 ZFYVE9O95405 1425 aa15.37■□□□□ 0.05
SCARB2-204ENST00000509994 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCARB2-204ENST00000509994 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
SCARB2-204ENST00000509994 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
SCARB2-204ENST00000509994 C14orf37Q86TY3 774 aa15.36■□□□□ 0.05
SCARB2-204ENST00000509994 CHD2O14647 1828 aaKnown RBP15.36■□□□□ 0.05
SCARB2-204ENST00000509994 MSH6P52701 1360 aa15.35■□□□□ 0.05
SCARB2-204ENST00000509994 ZNF326Q5BKZ1 582 aaKnown RBP15.34■□□□□ 0.05
SCARB2-204ENST00000509994 ROBO1Q9Y6N7 1651 aa15.34■□□□□ 0.05
SCARB2-204ENST00000509994 RRBP1Q9P2E9 1410 aaKnown RBP15.32■□□□□ 0.04
SCARB2-204ENST00000509994 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
SCARB2-204ENST00000509994 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
SCARB2-204ENST00000509994 KIF1BO60333 1816 aa15.31■□□□□ 0.04
SCARB2-204ENST00000509994 TRPM2O94759 1503 aa15.3■□□□□ 0.04
SCARB2-204ENST00000509994 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
SCARB2-204ENST00000509994 FAM135BQ49AJ0 1406 aa15.28■□□□□ 0.04
SCARB2-204ENST00000509994 TBX22Q9Y458 520 aa15.28■□□□□ 0.04
SCARB2-204ENST00000509994 CLTCL1P53675 1640 aa15.27■□□□□ 0.03
SCARB2-204ENST00000509994 NAIPQ13075 1403 aa15.26■□□□□ 0.03
SCARB2-204ENST00000509994 ADAMTS13Q76LX8 1427 aa15.26■□□□□ 0.03
SCARB2-204ENST00000509994 SLAIN2Q9P270 581 aa15.25■□□□□ 0.03
SCARB2-204ENST00000509994 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-204ENST00000509994 ATF3P18847 181 aa15.24■□□□□ 0.03
SCARB2-204ENST00000509994 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
SCARB2-204ENST00000509994 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
SCARB2-204ENST00000509994 AMOTL2Q9Y2J4 779 aa15.22■□□□□ 0.03
SCARB2-204ENST00000509994 HFM1A2PYH4 1435 aa15.22■□□□□ 0.03
SCARB2-204ENST00000509994 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.03
SCARB2-204ENST00000509994 SETBP1Q9Y6X0 1596 aa15.21■□□□□ 0.03
SCARB2-204ENST00000509994 NCOA3Q9Y6Q9 1424 aa15.2■□□□□ 0.02
SCARB2-204ENST00000509994 CADPS2Q86UW7 1296 aa15.2■□□□□ 0.02
SCARB2-204ENST00000509994 NEXMIFQ5QGS0 1516 aa15.19■□□□□ 0.02
SCARB2-204ENST00000509994 XRN1Q8IZH2 1706 aaKnown RBP15.19■□□□□ 0.02
SCARB2-204ENST00000509994 PTPRUQ92729 1446 aa15.18■□□□□ 0.02
SCARB2-204ENST00000509994 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
SCARB2-204ENST00000509994 COL16A1Q07092 1604 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-204ENST00000509994 METP08581 1390 aa15.15■□□□□ 0.02
SCARB2-204ENST00000509994 JCADQ9P266 1359 aa15.15■□□□□ 0.02
SCARB2-204ENST00000509994 MEX3CQ5U5Q3 659 aaKnown RBP15.15■□□□□ 0.02
SCARB2-204ENST00000509994 PPLO60437 1756 aa15.14■□□□□ 0.01
SCARB2-204ENST00000509994 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-204ENST00000509994 FOXD1Q16676 465 aa15.13■□□□□ 0.01
SCARB2-204ENST00000509994 NALCNQ8IZF0 1738 aa15.13■□□□□ 0.01
SCARB2-204ENST00000509994 DCCP43146 1447 aa15.12■□□□□ 0.01
SCARB2-204ENST00000509994 AHDC1Q5TGY3 1603 aaPredicted RBP15.12■□□□□ 0.01
SCARB2-204ENST00000509994 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
SCARB2-204ENST00000509994 SHPRHQ149N8 1683 aa15.1■□□□□ 0.01
SCARB2-204ENST00000509994 RGS17Q9UGC6 210 aaPredicted RBP15.1■□□□□ 0.01
SCARB2-204ENST00000509994 ASXL1Q8IXJ9 1541 aa15.1■□□□□ 0.01
SCARB2-204ENST00000509994 ADGRL3Q9HAR2 1447 aa15.09■□□□□ 0.01
SCARB2-204ENST00000509994 BRINP3Q76B58 766 aa15.09■□□□□ 0.01
SCARB2-204ENST00000509994 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
SCARB2-204ENST00000509994 SETD1AO15047 1707 aaKnown RBP15.09■□□□□ 0.01
SCARB2-204ENST00000509994 NUTM2BA6NNL0 878 aaPredicted RBP15.08■□□□□ 0
SCARB2-204ENST00000509994 NUTM2EB1AL46 878 aaPredicted RBP15.08■□□□□ 0
SCARB2-204ENST00000509994 RGL3Q3MIN7 710 aa15.08■□□□□ 0
SCARB2-204ENST00000509994 NUTM2AQ8IVF1 878 aaPredicted RBP15.08■□□□□ 0
SCARB2-204ENST00000509994 POTEAQ6S8J7 498 aa15.07■□□□□ 0
SCARB2-204ENST00000509994 SPATA31A6Q5VVP1 1343 aa15.07■□□□□ 0
SCARB2-204ENST00000509994 MST1RQ04912 1400 aa15.07■□□□□ 0
SCARB2-204ENST00000509994 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
SCARB2-204ENST00000509994 NHSL1Q5SYE7 1610 aa15.06■□□□□ 0
SCARB2-204ENST00000509994 PTCH1Q13635 1447 aa15.05■□□□□ -0
SCARB2-204ENST00000509994 LRP6O75581 1613 aa15.05■□□□□ -0
SCARB2-204ENST00000509994 IFT172Q9UG01 1749 aa15.03■□□□□ -0
SCARB2-204ENST00000509994 ROBO2Q9HCK4 1378 aa15.03■□□□□ -0
SCARB2-204ENST00000509994 DDX17Q92841 729 aaKnown RBP15.02■□□□□ -0
SCARB2-204ENST00000509994 STK26Q9P289 416 aa15.02■□□□□ -0
SCARB2-204ENST00000509994 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
SCARB2-204ENST00000509994 ADGRF5Q8IZF2 1346 aa15□□□□□ -0.01
SCARB2-204ENST00000509994 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
SCARB2-204ENST00000509994 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
SCARB2-204ENST00000509994 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
SCARB2-204ENST00000509994 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
SCARB2-204ENST00000509994 ACIN1Q9UKV3 1341 aaKnown RBP14.99□□□□□ -0.01
SCARB2-204ENST00000509994 SPATA31E1Q6ZUB1 1445 aa14.97□□□□□ -0.01
SCARB2-204ENST00000509994 CDC42BPGQ6DT37 1551 aa14.96□□□□□ -0.01
SCARB2-204ENST00000509994 KNDC1Q76NI1 1749 aa14.96□□□□□ -0.01
SCARB2-204ENST00000509994 C8orf37Q96NL8 207 aa14.96□□□□□ -0.01
SCARB2-204ENST00000509994 ORAI2Q96SN7 254 aa14.96□□□□□ -0.01
SCARB2-204ENST00000509994 PNPLA6Q8IY17 1366 aa14.96□□□□□ -0.02
SCARB2-204ENST00000509994 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
SCARB2-204ENST00000509994 AFF2P51816 1311 aa14.95□□□□□ -0.02
SCARB2-204ENST00000509994 NUTM2FA1L443 756 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms