RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 TRAPPC8Q9Y2L5 1435 aa10.56□□□□□ -0.72
CLGN-203ENST00000509477 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
CLGN-203ENST00000509477 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
CLGN-203ENST00000509477 TOM1O60784 492 aa10.55□□□□□ -0.72
CLGN-203ENST00000509477 SEC24BO95487 1268 aa10.55□□□□□ -0.72
CLGN-203ENST00000509477 RANGAP1P46060 587 aaPredicted RBP10.55□□□□□ -0.72
CLGN-203ENST00000509477 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
CLGN-203ENST00000509477 PPP1R37O75864 691 aa10.52□□□□□ -0.73
CLGN-203ENST00000509477 EFCAB2Q5VUJ9 269 aa10.51□□□□□ -0.73
CLGN-203ENST00000509477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLGN-203ENST00000509477 PLCH2O75038 1416 aa10.5□□□□□ -0.73
CLGN-203ENST00000509477 ZNF518AQ6AHZ1 1483 aa10.5□□□□□ -0.73
CLGN-203ENST00000509477 SAMD9Q5K651 1589 aa10.5□□□□□ -0.73
CLGN-203ENST00000509477 MS4A4AQ96JQ5 239 aa10.49□□□□□ -0.73
CLGN-203ENST00000509477 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
CLGN-203ENST00000509477 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
CLGN-203ENST00000509477 AFAP1Q8N556 730 aa10.48□□□□□ -0.73
CLGN-203ENST00000509477 CNTLNQ9NXG0 1405 aa10.48□□□□□ -0.73
CLGN-203ENST00000509477 PRXQ9BXM0 1461 aa10.48□□□□□ -0.73
CLGN-203ENST00000509477 DIP2CQ9Y2E4 1556 aa10.47□□□□□ -0.73
CLGN-203ENST00000509477 CDAN1Q8IWY9 1227 aa10.46□□□□□ -0.73
CLGN-203ENST00000509477 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.73
CLGN-203ENST00000509477 MYO5CQ9NQX4 1742 aa10.46□□□□□ -0.74
CLGN-203ENST00000509477 AGLP35573 1532 aa10.45□□□□□ -0.74
CLGN-203ENST00000509477 NPATQ14207 1427 aa10.45□□□□□ -0.74
CLGN-203ENST00000509477 PLCG2P16885 1265 aa10.45□□□□□ -0.74
CLGN-203ENST00000509477 REREQ9P2R6 1566 aa10.44□□□□□ -0.74
CLGN-203ENST00000509477 ARHGAP5Q13017 1502 aa10.44□□□□□ -0.74
CLGN-203ENST00000509477 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
CLGN-203ENST00000509477 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
CLGN-203ENST00000509477 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
CLGN-203ENST00000509477 ABCA6Q8N139 1617 aa10.44□□□□□ -0.74
CLGN-203ENST00000509477 KDM5CP41229 1560 aa10.43□□□□□ -0.74
CLGN-203ENST00000509477 CPS1P31327 1500 aa10.43□□□□□ -0.74
CLGN-203ENST00000509477 PTPRKQ15262 1439 aa10.43□□□□□ -0.74
CLGN-203ENST00000509477 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
CLGN-203ENST00000509477 CDK13Q14004 1512 aaKnown RBP10.43□□□□□ -0.74
CLGN-203ENST00000509477 ZMYM3Q14202 1370 aa10.42□□□□□ -0.74
CLGN-203ENST00000509477 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
CLGN-203ENST00000509477 CEP170BQ9Y4F5 1589 aaPredicted RBP10.42□□□□□ -0.74
CLGN-203ENST00000509477 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
CLGN-203ENST00000509477 TCOF1Q13428 1488 aaKnown RBP10.41□□□□□ -0.74
CLGN-203ENST00000509477 MROH2AA6NES4 1674 aa10.41□□□□□ -0.74
CLGN-203ENST00000509477 ZNF142P52746 1687 aaPredicted RBP10.41□□□□□ -0.74
CLGN-203ENST00000509477 CDK11AQ9UQ88 783 aaPredicted RBP10.4□□□□□ -0.74
CLGN-203ENST00000509477 MLH3Q9UHC1 1453 aa10.4□□□□□ -0.74
CLGN-203ENST00000509477 SHANK2Q9UPX8 1470 aa10.39□□□□□ -0.75
CLGN-203ENST00000509477 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
CLGN-203ENST00000509477 KIF14Q15058 1648 aa10.38□□□□□ -0.75
CLGN-203ENST00000509477 RGS17Q9UGC6 210 aaPredicted RBP10.38□□□□□ -0.75
CLGN-203ENST00000509477 PDCD7Q8N8D1 485 aaKnown RBP10.37□□□□□ -0.75
CLGN-203ENST00000509477 CLTCQ00610 1675 aaKnown RBP10.37□□□□□ -0.75
CLGN-203ENST00000509477 CLIP1P30622 1438 aa10.35□□□□□ -0.75
CLGN-203ENST00000509477 POLR1AO95602 1720 aaPredicted RBP10.34□□□□□ -0.75
CLGN-203ENST00000509477 G3V3G9 751 aa10.34□□□□□ -0.75
CLGN-203ENST00000509477 PDE4AP27815 886 aa10.34□□□□□ -0.75
CLGN-203ENST00000509477 GGT6Q6P531 493 aa10.34□□□□□ -0.75
CLGN-203ENST00000509477 POTEAQ6S8J7 498 aa10.33□□□□□ -0.76
CLGN-203ENST00000509477 KIDINS220Q9ULH0 1771 aa10.32□□□□□ -0.76
CLGN-203ENST00000509477 A2ML1A8K2U0 1454 aa10.32□□□□□ -0.76
CLGN-203ENST00000509477 ERICH6Q7L0X2 663 aa10.32□□□□□ -0.76
CLGN-203ENST00000509477 ANKLE2Q86XL3 938 aa10.32□□□□□ -0.76
CLGN-203ENST00000509477 DNMT1P26358 1616 aaKnown RBP10.32□□□□□ -0.76
CLGN-203ENST00000509477 ABCC1P33527 1531 aa10.32□□□□□ -0.76
CLGN-203ENST00000509477 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
CLGN-203ENST00000509477 SETD1AO15047 1707 aaKnown RBP10.31□□□□□ -0.76
CLGN-203ENST00000509477 NBR1Q14596 966 aa10.31□□□□□ -0.76
CLGN-203ENST00000509477 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
CLGN-203ENST00000509477 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
CLGN-203ENST00000509477 RNF17Q9BXT8 1623 aaKnown RBP10.3□□□□□ -0.76
CLGN-203ENST00000509477 ALKQ9UM73 1620 aa10.3□□□□□ -0.76
CLGN-203ENST00000509477 ST18O60284 1047 aa10.3□□□□□ -0.76
CLGN-203ENST00000509477 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
CLGN-203ENST00000509477 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
CLGN-203ENST00000509477 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
CLGN-203ENST00000509477 NEURL4Q96JN8 1562 aa10.3□□□□□ -0.76
CLGN-203ENST00000509477 CDC42BPBQ9Y5S2 1711 aa10.3□□□□□ -0.76
CLGN-203ENST00000509477 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
CLGN-203ENST00000509477 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
CLGN-203ENST00000509477 VWDEQ8N2E2 1590 aa10.29□□□□□ -0.76
CLGN-203ENST00000509477 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
CLGN-203ENST00000509477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.27□□□□□ -0.76
CLGN-203ENST00000509477 NPHP4O75161 1426 aaPredicted RBP10.27□□□□□ -0.77
CLGN-203ENST00000509477 PREX2Q70Z35 1606 aa10.27□□□□□ -0.77
CLGN-203ENST00000509477 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.77
CLGN-203ENST00000509477 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
CLGN-203ENST00000509477 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
CLGN-203ENST00000509477 TMEM121BQ9BXQ6 578 aaPredicted RBP10.26□□□□□ -0.77
CLGN-203ENST00000509477 LRRC7Q96NW7 1537 aa10.26□□□□□ -0.77
CLGN-203ENST00000509477 SYNMO15061 1565 aa10.26□□□□□ -0.77
CLGN-203ENST00000509477 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
CLGN-203ENST00000509477 TNRQ92752 1358 aa10.26□□□□□ -0.77
CLGN-203ENST00000509477 A2MP01023 1474 aa10.25□□□□□ -0.77
CLGN-203ENST00000509477 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
CLGN-203ENST00000509477 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.25□□□□□ -0.77
CLGN-203ENST00000509477 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
CLGN-203ENST00000509477 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
CLGN-203ENST00000509477 E2F4Q16254 413 aa10.24□□□□□ -0.77
CLGN-203ENST00000509477 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLGN-203ENST00000509477 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms