RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 POTEAQ6S8J7 498 aa16.82■□□□□ 0.28
SIL1-212ENST00000509400 FOXD1Q16676 465 aa16.81■□□□□ 0.28
SIL1-212ENST00000509400 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
SIL1-212ENST00000509400 UNC13BO14795 1591 aa16.81■□□□□ 0.28
SIL1-212ENST00000509400 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
SIL1-212ENST00000509400 EID1Q9Y6B2 187 aa16.8■□□□□ 0.28
SIL1-212ENST00000509400 LMTK2Q8IWU2 1503 aa16.8■□□□□ 0.28
SIL1-212ENST00000509400 TET3O43151 1660 aa16.79■□□□□ 0.28
SIL1-212ENST00000509400 ROBO1Q9Y6N7 1651 aa16.78■□□□□ 0.28
SIL1-212ENST00000509400 IDI1Q13907 227 aa16.78■□□□□ 0.28
SIL1-212ENST00000509400 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
SIL1-212ENST00000509400 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
SIL1-212ENST00000509400 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
SIL1-212ENST00000509400 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
SIL1-212ENST00000509400 KCNA6P17658 529 aa16.76■□□□□ 0.27
SIL1-212ENST00000509400 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
SIL1-212ENST00000509400 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
SIL1-212ENST00000509400 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
SIL1-212ENST00000509400 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
SIL1-212ENST00000509400 NOS1P29475 1434 aa16.72■□□□□ 0.27
SIL1-212ENST00000509400 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
SIL1-212ENST00000509400 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
SIL1-212ENST00000509400 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
SIL1-212ENST00000509400 MYO5BQ9ULV0 1848 aa16.68■□□□□ 0.26
SIL1-212ENST00000509400 PHLPP1O60346 1717 aa16.67■□□□□ 0.26
SIL1-212ENST00000509400 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
SIL1-212ENST00000509400 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
SIL1-212ENST00000509400 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
SIL1-212ENST00000509400 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
SIL1-212ENST00000509400 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
SIL1-212ENST00000509400 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
SIL1-212ENST00000509400 E9PCH4 1651 aa16.65■□□□□ 0.26
SIL1-212ENST00000509400 MSH6P52701 1360 aa16.64■□□□□ 0.26
SIL1-212ENST00000509400 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
SIL1-212ENST00000509400 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.25
SIL1-212ENST00000509400 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
SIL1-212ENST00000509400 JCADQ9P266 1359 aa16.63■□□□□ 0.25
SIL1-212ENST00000509400 BCANQ96GW7 911 aa16.62■□□□□ 0.25
SIL1-212ENST00000509400 LRP6O75581 1613 aa16.62■□□□□ 0.25
SIL1-212ENST00000509400 PLEKHG1Q9ULL1 1385 aa16.62■□□□□ 0.25
SIL1-212ENST00000509400 TMEM131LA2VDJ0 1609 aa16.61■□□□□ 0.25
SIL1-212ENST00000509400 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
SIL1-212ENST00000509400 RIMS2Q9UQ26 1411 aa16.6■□□□□ 0.25
SIL1-212ENST00000509400 SRCAPQ6ZRS2 3230 aa16.57■□□□□ 0.24
SIL1-212ENST00000509400 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
SIL1-212ENST00000509400 ADAMTS13Q76LX8 1427 aa16.56■□□□□ 0.24
SIL1-212ENST00000509400 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
SIL1-212ENST00000509400 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
SIL1-212ENST00000509400 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
SIL1-212ENST00000509400 TRPM2O94759 1503 aa16.55■□□□□ 0.24
SIL1-212ENST00000509400 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
SIL1-212ENST00000509400 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
SIL1-212ENST00000509400 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
SIL1-212ENST00000509400 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
SIL1-212ENST00000509400 AHDC1Q5TGY3 1603 aaPredicted RBP16.54■□□□□ 0.24
SIL1-212ENST00000509400 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
SIL1-212ENST00000509400 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
SIL1-212ENST00000509400 SHPRHQ149N8 1683 aa16.53■□□□□ 0.24
SIL1-212ENST00000509400 SPATA31A6Q5VVP1 1343 aa16.52■□□□□ 0.24
SIL1-212ENST00000509400 CCER1Q8TC90 406 aaPredicted RBP16.52■□□□□ 0.24
SIL1-212ENST00000509400 PTPRUQ92729 1446 aa16.52■□□□□ 0.23
SIL1-212ENST00000509400 CLTCL1P53675 1640 aa16.52■□□□□ 0.23
SIL1-212ENST00000509400 DIP2AQ14689 1571 aa16.51■□□□□ 0.23
SIL1-212ENST00000509400 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
SIL1-212ENST00000509400 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
SIL1-212ENST00000509400 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
SIL1-212ENST00000509400 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
SIL1-212ENST00000509400 MEX3CQ5U5Q3 659 aaKnown RBP16.49■□□□□ 0.23
SIL1-212ENST00000509400 SPATA31E1Q6ZUB1 1445 aa16.49■□□□□ 0.23
SIL1-212ENST00000509400 BRINP3Q76B58 766 aa16.49■□□□□ 0.23
SIL1-212ENST00000509400 CADPS2Q86UW7 1296 aa16.49■□□□□ 0.23
SIL1-212ENST00000509400 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
SIL1-212ENST00000509400 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.48■□□□□ 0.23
SIL1-212ENST00000509400 ATF3P18847 181 aa16.47■□□□□ 0.23
SIL1-212ENST00000509400 PIK3R4Q99570 1358 aa16.47■□□□□ 0.23
SIL1-212ENST00000509400 AMOTL2Q9Y2J4 779 aa16.46■□□□□ 0.23
SIL1-212ENST00000509400 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
SIL1-212ENST00000509400 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
SIL1-212ENST00000509400 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
SIL1-212ENST00000509400 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
SIL1-212ENST00000509400 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
SIL1-212ENST00000509400 KDM2AQ9Y2K7 1162 aa16.44■□□□□ 0.22
SIL1-212ENST00000509400 RXRBP28702 533 aa16.43■□□□□ 0.22
SIL1-212ENST00000509400 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
SIL1-212ENST00000509400 ASXL1Q8IXJ9 1541 aa16.43■□□□□ 0.22
SIL1-212ENST00000509400 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
SIL1-212ENST00000509400 XRN1Q8IZH2 1706 aaKnown RBP16.42■□□□□ 0.22
SIL1-212ENST00000509400 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
SIL1-212ENST00000509400 AFF2P51816 1311 aa16.42■□□□□ 0.22
SIL1-212ENST00000509400 NHSL1Q5SYE7 1610 aa16.41■□□□□ 0.22
SIL1-212ENST00000509400 VGFO15240 615 aaPredicted RBP16.41■□□□□ 0.22
SIL1-212ENST00000509400 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
SIL1-212ENST00000509400 MST1RQ04912 1400 aa16.41■□□□□ 0.22
SIL1-212ENST00000509400 DCCP43146 1447 aa16.4■□□□□ 0.22
SIL1-212ENST00000509400 CDK12Q9NYV4 1490 aaPredicted RBP16.4■□□□□ 0.22
SIL1-212ENST00000509400 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
SIL1-212ENST00000509400 METP08581 1390 aa16.38■□□□□ 0.21
SIL1-212ENST00000509400 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
SIL1-212ENST00000509400 RGS12O14924 1447 aa16.37■□□□□ 0.21
SIL1-212ENST00000509400 EP400Q96L91 3159 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms