RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
CCSER1-209ENST00000509176 H3BQV1 296 aa13.61□□□□□ -0.23
CCSER1-209ENST00000509176 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
CCSER1-209ENST00000509176 NLRP13Q86W25 1043 aa13.61□□□□□ -0.23
CCSER1-209ENST00000509176 RIC3Q7Z5B4 369 aa13.61□□□□□ -0.23
CCSER1-209ENST00000509176 FAM184AQ8NB25 1140 aa13.61□□□□□ -0.23
CCSER1-209ENST00000509176 A0A0U1RQG5 324 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-209ENST00000509176 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-209ENST00000509176 FKBP5Q13451 457 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-209ENST00000509176 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
CCSER1-209ENST00000509176 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-209ENST00000509176 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-209ENST00000509176 SLKQ9H2G2 1235 aaPredicted RBP13.6□□□□□ -0.23
CCSER1-209ENST00000509176 GBP4Q96PP9 640 aa13.59□□□□□ -0.23
CCSER1-209ENST00000509176 IFIT2P09913 472 aaKnown RBP13.59□□□□□ -0.23
CCSER1-209ENST00000509176 MSNP26038 577 aaKnown RBP13.59□□□□□ -0.23
CCSER1-209ENST00000509176 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
CCSER1-209ENST00000509176 IKQ13123 557 aaPredicted RBP13.59□□□□□ -0.23
CCSER1-209ENST00000509176 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
CCSER1-209ENST00000509176 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.23
CCSER1-209ENST00000509176 G3BP1Q13283 466 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCSER1-209ENST00000509176 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
CCSER1-209ENST00000509176 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
CCSER1-209ENST00000509176 HMOX1P09601 288 aa13.58□□□□□ -0.24
CCSER1-209ENST00000509176 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.24
CCSER1-209ENST00000509176 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
CCSER1-209ENST00000509176 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.24
CCSER1-209ENST00000509176 NEUROD6Q96NK8 337 aa13.57□□□□□ -0.24
CCSER1-209ENST00000509176 CPLX2Q6PUV4 134 aaKnown RBP13.57□□□□□ -0.24
CCSER1-209ENST00000509176 TOM1L2Q6ZVM7 507 aa13.57□□□□□ -0.24
CCSER1-209ENST00000509176 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
CCSER1-209ENST00000509176 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 MCTP1Q6DN14 999 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 TMEM132EQ6IEE7 984 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 SYAP1Q96A49 352 aaPredicted RBP13.56□□□□□ -0.24
CCSER1-209ENST00000509176 GZF1Q9H116 711 aaPredicted RBP13.56□□□□□ -0.24
CCSER1-209ENST00000509176 RIPK4P57078 832 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 TRDNQ13061 729 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 NFXL1Q6ZNB6 911 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 TRIM29Q14134 588 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
CCSER1-209ENST00000509176 CSPP1Q1MSJ5 1256 aa13.55□□□□□ -0.24
CCSER1-209ENST00000509176 ERICH2A1L162 156 aa13.55□□□□□ -0.24
CCSER1-209ENST00000509176 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
CCSER1-209ENST00000509176 AFAP1Q8N556 730 aa13.54□□□□□ -0.24
CCSER1-209ENST00000509176 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
CCSER1-209ENST00000509176 ST18O60284 1047 aa13.54□□□□□ -0.24
CCSER1-209ENST00000509176 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
CCSER1-209ENST00000509176 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
CCSER1-209ENST00000509176 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
CCSER1-209ENST00000509176 CPLX1O14810 134 aa13.53□□□□□ -0.24
CCSER1-209ENST00000509176 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCSER1-209ENST00000509176 TPM3P06753 285 aa13.52□□□□□ -0.24
CCSER1-209ENST00000509176 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.24
CCSER1-209ENST00000509176 WASHC4Q2M389 1173 aa13.52□□□□□ -0.25
CCSER1-209ENST00000509176 WIZO95785 1651 aa13.51□□□□□ -0.25
CCSER1-209ENST00000509176 FOXD4L6Q3SYB3 417 aaPredicted RBP13.51□□□□□ -0.25
CCSER1-209ENST00000509176 FOXD4L3Q6VB84 417 aaPredicted RBP13.51□□□□□ -0.25
CCSER1-209ENST00000509176 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
CCSER1-209ENST00000509176 ZKSCAN2Q63HK3 967 aa13.51□□□□□ -0.25
CCSER1-209ENST00000509176 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
CCSER1-209ENST00000509176 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
CCSER1-209ENST00000509176 TPM2P07951 284 aa13.51□□□□□ -0.25
CCSER1-209ENST00000509176 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
CCSER1-209ENST00000509176 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
CCSER1-209ENST00000509176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
CCSER1-209ENST00000509176 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
CCSER1-209ENST00000509176 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
CCSER1-209ENST00000509176 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
CCSER1-209ENST00000509176 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
CCSER1-209ENST00000509176 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
CCSER1-209ENST00000509176 TMEM132AQ24JP5 1023 aa13.49□□□□□ -0.25
CCSER1-209ENST00000509176 PCMTD1Q96MG8 357 aaPredicted RBP13.49□□□□□ -0.25
CCSER1-209ENST00000509176 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
CCSER1-209ENST00000509176 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
CCSER1-209ENST00000509176 APAF1O14727 1248 aa13.49□□□□□ -0.25
CCSER1-209ENST00000509176 RBM5P52756 815 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCSER1-209ENST00000509176 SLC26A8Q96RN1 970 aa13.49□□□□□ -0.25
CCSER1-209ENST00000509176 MYBBP1AQ9BQG0 1328 aaKnown RBP13.49□□□□□ -0.25
CCSER1-209ENST00000509176 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
CCSER1-209ENST00000509176 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
CCSER1-209ENST00000509176 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
CCSER1-209ENST00000509176 PTMSP20962 102 aa13.48□□□□□ -0.25
CCSER1-209ENST00000509176 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
CCSER1-209ENST00000509176 ZNF644Q9H582 1327 aaPredicted RBP13.48□□□□□ -0.25
CCSER1-209ENST00000509176 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
CCSER1-209ENST00000509176 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
CCSER1-209ENST00000509176 CABP4P57796 275 aa13.47□□□□□ -0.25
CCSER1-209ENST00000509176 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
CCSER1-209ENST00000509176 E9PSI1 815 aa13.46□□□□□ -0.26
CCSER1-209ENST00000509176 API5Q9BZZ5 524 aaKnown RBP13.46□□□□□ -0.26
CCSER1-209ENST00000509176 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
CCSER1-209ENST00000509176 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
CCSER1-209ENST00000509176 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
CCSER1-209ENST00000509176 FOSBP53539 338 aa13.45□□□□□ -0.26
CCSER1-209ENST00000509176 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
CCSER1-209ENST00000509176 RAPGEF3O95398 923 aa13.45□□□□□ -0.26
CCSER1-209ENST00000509176 SMG6Q86US8 1419 aaKnown RBP13.44□□□□□ -0.26
CCSER1-209ENST00000509176 COG6Q9Y2V7 657 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms