RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PKDCCQ504Y2 493 aa7.1□□□□□ -1.27
DEPDC1B-204ENST00000509006 PRR14Q9BWN1 585 aa7.1□□□□□ -1.27
DEPDC1B-204ENST00000509006 POTECB2RU33 542 aa7.09□□□□□ -1.27
DEPDC1B-204ENST00000509006 MYT1Q01538 1121 aa7.09□□□□□ -1.27
DEPDC1B-204ENST00000509006 SPRYD7Q5W111 196 aa7.09□□□□□ -1.27
DEPDC1B-204ENST00000509006 S1PR4O95977 384 aa7.08□□□□□ -1.28
DEPDC1B-204ENST00000509006 CFAP44Q96MT7 982 aa7.08□□□□□ -1.28
DEPDC1B-204ENST00000509006 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.08□□□□□ -1.28
DEPDC1B-204ENST00000509006 TNFRSF10AO00220 468 aa7.07□□□□□ -1.28
DEPDC1B-204ENST00000509006 MLLT3P42568 568 aaPredicted RBP7.07□□□□□ -1.28
DEPDC1B-204ENST00000509006 LIAT1Q6ZQX7 453 aa7.07□□□□□ -1.28
DEPDC1B-204ENST00000509006 DNAJB2P25686 324 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 PRR20EP86478 221 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 PRR20CP86479 221 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 PRR20DP86480 221 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 PRR20BP86481 221 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 PRR20AP86496 221 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 ZNF697Q5TEC3 545 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 PAXIP1Q6ZW49 1069 aaPredicted RBP7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 ZNF598Q86UK7 904 aaKnown RBP7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 ANKLE1Q8NAG6 615 aa7.06□□□□□ -1.28
DEPDC1B-204ENST00000509006 FAM187AA6NFU0 413 aa7.05□□□□□ -1.28
DEPDC1B-204ENST00000509006 DGAT1O75907 488 aa7.05□□□□□ -1.28
DEPDC1B-204ENST00000509006 TMEM134Q9H6X4 195 aa7.05□□□□□ -1.28
DEPDC1B-204ENST00000509006 ACTN4O43707 911 aaKnown RBP7.04□□□□□ -1.28
DEPDC1B-204ENST00000509006 CFHP08603 1231 aa7.04□□□□□ -1.28
DEPDC1B-204ENST00000509006 PTGDRQ13258 359 aa7.04□□□□□ -1.28
DEPDC1B-204ENST00000509006 FAM161AQ3B820 660 aa7.04□□□□□ -1.28
DEPDC1B-204ENST00000509006 ADGRG1Q9Y653 693 aa7.04□□□□□ -1.28
DEPDC1B-204ENST00000509006 GDF9O60383 454 aa7.03□□□□□ -1.28
DEPDC1B-204ENST00000509006 KMT5BQ4FZB7 885 aa7.03□□□□□ -1.28
DEPDC1B-204ENST00000509006 PLA2G2CQ5R387 149 aa7.03□□□□□ -1.28
DEPDC1B-204ENST00000509006 RBM46Q8TBY0 533 aaKnown RBP7.03□□□□□ -1.28
DEPDC1B-204ENST00000509006 RCCD1A6NED2 376 aa7.02□□□□□ -1.29
DEPDC1B-204ENST00000509006 ST8SIA5O15466 376 aa7.02□□□□□ -1.29
DEPDC1B-204ENST00000509006 ADH1BP00325 375 aa7.02□□□□□ -1.29
DEPDC1B-204ENST00000509006 SLC10A3P09131 477 aa7.01□□□□□ -1.29
DEPDC1B-204ENST00000509006 SLC6A16Q9GZN6 736 aa6.99□□□□□ -1.29
DEPDC1B-204ENST00000509006 AAASQ9NRG9 546 aa6.99□□□□□ -1.29
DEPDC1B-204ENST00000509006 NR1I2O75469 434 aa6.98□□□□□ -1.29
DEPDC1B-204ENST00000509006 NUTM2FA1L443 756 aa6.97□□□□□ -1.29
DEPDC1B-204ENST00000509006 PUS10Q3MIT2 529 aaKnown RBP6.97□□□□□ -1.29
DEPDC1B-204ENST00000509006 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
DEPDC1B-204ENST00000509006 FOXC1Q12948 553 aa6.96□□□□□ -1.3
DEPDC1B-204ENST00000509006 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1B-204ENST00000509006 SCUBE3Q8IX30 993 aa6.96□□□□□ -1.3
DEPDC1B-204ENST00000509006 ARHGEF1Q92888 912 aaKnown RBP6.96□□□□□ -1.3
DEPDC1B-204ENST00000509006 PKD2L1Q9P0L9 805 aa6.96□□□□□ -1.3
DEPDC1B-204ENST00000509006 TREML4Q6UXN2 200 aa6.95□□□□□ -1.3
DEPDC1B-204ENST00000509006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-204ENST00000509006 SPSB2Q99619 263 aa6.94□□□□□ -1.3
DEPDC1B-204ENST00000509006 DACH1Q9UI36 760 aa6.94□□□□□ -1.3
DEPDC1B-204ENST00000509006 PXYLP1Q8TE99 480 aa6.92□□□□□ -1.3
DEPDC1B-204ENST00000509006 FCHSD2O94868 740 aa6.91□□□□□ -1.3
DEPDC1B-204ENST00000509006 CRIPAKQ8N1N5 446 aa6.91□□□□□ -1.3
DEPDC1B-204ENST00000509006 FCF1Q9Y324 198 aaKnown RBP6.91□□□□□ -1.3
DEPDC1B-204ENST00000509006 LMOD2Q6P5Q4 547 aa6.9□□□□□ -1.3
DEPDC1B-204ENST00000509006 GMPR2Q9P2T1 348 aaKnown RBP6.9□□□□□ -1.3
DEPDC1B-204ENST00000509006 METTL3Q86U44 580 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-204ENST00000509006 TSHZ2Q9NRE2 1034 aa6.89□□□□□ -1.31
DEPDC1B-204ENST00000509006 TOR4AQ9NXH8 423 aa6.89□□□□□ -1.31
DEPDC1B-204ENST00000509006 AVPP01185 164 aa6.88□□□□□ -1.31
DEPDC1B-204ENST00000509006 OATP04181 439 aa6.88□□□□□ -1.31
DEPDC1B-204ENST00000509006 RPIAP49247 311 aa6.88□□□□□ -1.31
DEPDC1B-204ENST00000509006 MORN1Q5T089 497 aa6.88□□□□□ -1.31
DEPDC1B-204ENST00000509006 PRDM9Q9NQV7 894 aa6.88□□□□□ -1.31
DEPDC1B-204ENST00000509006 AXIN1O15169 862 aa6.87□□□□□ -1.31
DEPDC1B-204ENST00000509006 WFS1O76024 890 aa6.87□□□□□ -1.31
DEPDC1B-204ENST00000509006 FUT2Q10981 343 aa6.87□□□□□ -1.31
DEPDC1B-204ENST00000509006 CYP4X1Q8N118 509 aa6.87□□□□□ -1.31
DEPDC1B-204ENST00000509006 THAP11Q96EK4 314 aa6.87□□□□□ -1.31
DEPDC1B-204ENST00000509006 C11orf95C9JLR9 678 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-204ENST00000509006 SEMA3EO15041 775 aa6.86□□□□□ -1.31
DEPDC1B-204ENST00000509006 RSPH4AQ5TD94 716 aa6.86□□□□□ -1.31
DEPDC1B-204ENST00000509006 FAM160A2Q8N612 972 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-204ENST00000509006 RDH13Q8NBN7 331 aa6.86□□□□□ -1.31
DEPDC1B-204ENST00000509006 NLRP7Q8WX94 980 aa6.86□□□□□ -1.31
DEPDC1B-204ENST00000509006 CD2BP2O95400 341 aaKnown RBP6.85□□□□□ -1.31
DEPDC1B-204ENST00000509006 SLC27A5Q9Y2P5 690 aa6.85□□□□□ -1.31
DEPDC1B-204ENST00000509006 DDX11L8A8MPP1 907 aa6.84□□□□□ -1.31
DEPDC1B-204ENST00000509006 FECHP22830 423 aa6.84□□□□□ -1.31
DEPDC1B-204ENST00000509006 NFX1Q12986 1120 aaKnown RBP6.84□□□□□ -1.31
DEPDC1B-204ENST00000509006 HIC1Q14526 733 aa6.84□□□□□ -1.31
DEPDC1B-204ENST00000509006 FMNL1O95466 1100 aaPredicted RBP6.83□□□□□ -1.32
DEPDC1B-204ENST00000509006 CTC1Q2NKJ3 1217 aa6.83□□□□□ -1.32
DEPDC1B-204ENST00000509006 TTC24A2A3L6 582 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-204ENST00000509006 ATP6V1AP38606 617 aa6.82□□□□□ -1.32
DEPDC1B-204ENST00000509006 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-204ENST00000509006 RBM26Q5T8P6 1007 aaKnown RBP6.82□□□□□ -1.32
DEPDC1B-204ENST00000509006 DAXXQ9UER7 740 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-204ENST00000509006 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
DEPDC1B-204ENST00000509006 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
DEPDC1B-204ENST00000509006 SMPD1P17405 629 aa6.8□□□□□ -1.32
DEPDC1B-204ENST00000509006 GCGRP47871 477 aa6.8□□□□□ -1.32
DEPDC1B-204ENST00000509006 BRICD5Q6PL45 260 aa6.8□□□□□ -1.32
DEPDC1B-204ENST00000509006 GNPATO15228 680 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 GPR37O15354 613 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 ZBTB24O43167 697 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 WIPF1O43516 503 aa6.79□□□□□ -1.32
DEPDC1B-204ENST00000509006 SNRPBP14678 240 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms