RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
SPSB4-204ENST00000508828 NRXN1Q9ULB1 1477 aa18.48■□□□□ 0.55
SPSB4-204ENST00000508828 WASHC2AQ641Q2 1341 aa18.48■□□□□ 0.55
SPSB4-204ENST00000508828 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
SPSB4-204ENST00000508828 NBPF1Q3BBV0 1214 aa18.45■□□□□ 0.54
SPSB4-204ENST00000508828 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
SPSB4-204ENST00000508828 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
SPSB4-204ENST00000508828 IDI1Q13907 227 aa18.43■□□□□ 0.54
SPSB4-204ENST00000508828 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
SPSB4-204ENST00000508828 SCAF11Q99590 1463 aaKnown RBP18.41■□□□□ 0.54
SPSB4-204ENST00000508828 FBXO31Q5XUX0 539 aaPredicted RBP18.41■□□□□ 0.54
SPSB4-204ENST00000508828 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
SPSB4-204ENST00000508828 ZMYM3Q14202 1370 aa18.41■□□□□ 0.54
SPSB4-204ENST00000508828 MYO5BQ9ULV0 1848 aa18.4■□□□□ 0.54
SPSB4-204ENST00000508828 SETBP1Q9Y6X0 1596 aa18.4■□□□□ 0.54
SPSB4-204ENST00000508828 ST20-MTHFSA0A0A6YYL1 179 aa18.4■□□□□ 0.54
SPSB4-204ENST00000508828 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
SPSB4-204ENST00000508828 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
SPSB4-204ENST00000508828 EIF3AQ14152 1382 aaKnown RBP18.39■□□□□ 0.53
SPSB4-204ENST00000508828 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
SPSB4-204ENST00000508828 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
SPSB4-204ENST00000508828 VGFO15240 615 aaPredicted RBP18.37■□□□□ 0.53
SPSB4-204ENST00000508828 ANP32CO43423 234 aa18.37■□□□□ 0.53
SPSB4-204ENST00000508828 TNRQ92752 1358 aa18.36■□□□□ 0.53
SPSB4-204ENST00000508828 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
SPSB4-204ENST00000508828 CFAP70Q5T0N1 1121 aa18.35■□□□□ 0.53
SPSB4-204ENST00000508828 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.52
SPSB4-204ENST00000508828 ADAMTSL3P82987 1691 aa18.33■□□□□ 0.52
SPSB4-204ENST00000508828 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.52
SPSB4-204ENST00000508828 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
SPSB4-204ENST00000508828 POLR3GLQ9BT43 218 aa18.31■□□□□ 0.52
SPSB4-204ENST00000508828 C3P01024 1663 aa18.31■□□□□ 0.52
SPSB4-204ENST00000508828 MYO3AQ8NEV4 1616 aa18.31■□□□□ 0.52
SPSB4-204ENST00000508828 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
SPSB4-204ENST00000508828 TMF1P82094 1093 aa18.3■□□□□ 0.52
SPSB4-204ENST00000508828 TESK2Q96S53 571 aa18.3■□□□□ 0.52
SPSB4-204ENST00000508828 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
SPSB4-204ENST00000508828 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
SPSB4-204ENST00000508828 RIMS2Q9UQ26 1411 aa18.28■□□□□ 0.52
SPSB4-204ENST00000508828 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
SPSB4-204ENST00000508828 PTPRMP28827 1452 aa18.26■□□□□ 0.51
SPSB4-204ENST00000508828 UBR1Q8IWV7 1749 aa18.26■□□□□ 0.51
SPSB4-204ENST00000508828 CDCA8Q53HL2 280 aa18.25■□□□□ 0.51
SPSB4-204ENST00000508828 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
SPSB4-204ENST00000508828 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.25■□□□□ 0.51
SPSB4-204ENST00000508828 DISP3Q9P2K9 1392 aa18.25■□□□□ 0.51
SPSB4-204ENST00000508828 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
SPSB4-204ENST00000508828 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
SPSB4-204ENST00000508828 HDGFP51858 240 aaKnown RBP18.22■□□□□ 0.51
SPSB4-204ENST00000508828 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
SPSB4-204ENST00000508828 ARHGEF28Q8N1W1 1705 aaKnown RBP18.21■□□□□ 0.51
SPSB4-204ENST00000508828 ALKQ9UM73 1620 aa18.21■□□□□ 0.51
SPSB4-204ENST00000508828 QRICH2Q9H0J4 1663 aa18.21■□□□□ 0.51
SPSB4-204ENST00000508828 CENPJQ9HC77 1338 aaPredicted RBP18.21■□□□□ 0.51
SPSB4-204ENST00000508828 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
SPSB4-204ENST00000508828 CEBPAP49715 358 aaPredicted RBP18.18■□□□□ 0.5
SPSB4-204ENST00000508828 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
SPSB4-204ENST00000508828 TRAK1Q9UPV9 953 aa18.18■□□□□ 0.5
SPSB4-204ENST00000508828 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
SPSB4-204ENST00000508828 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
SPSB4-204ENST00000508828 SETD1AO15047 1707 aaKnown RBP18.16■□□□□ 0.5
SPSB4-204ENST00000508828 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
SPSB4-204ENST00000508828 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
SPSB4-204ENST00000508828 NRXN3Q9Y4C0 1643 aa18.15■□□□□ 0.5
SPSB4-204ENST00000508828 SLIT1O75093 1534 aa18.13■□□□□ 0.49
SPSB4-204ENST00000508828 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
SPSB4-204ENST00000508828 MYOM1P52179 1685 aa18.12■□□□□ 0.49
SPSB4-204ENST00000508828 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
SPSB4-204ENST00000508828 KTN1Q86UP2 1357 aaKnown RBP18.12■□□□□ 0.49
SPSB4-204ENST00000508828 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
SPSB4-204ENST00000508828 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
SPSB4-204ENST00000508828 CEP170BQ9Y4F5 1589 aaPredicted RBP18.1■□□□□ 0.49
SPSB4-204ENST00000508828 PLEKHG1Q9ULL1 1385 aa18.1■□□□□ 0.49
SPSB4-204ENST00000508828 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
SPSB4-204ENST00000508828 ZNF142P52746 1687 aaPredicted RBP18.09■□□□□ 0.49
SPSB4-204ENST00000508828 THEMISQ8N1K5 641 aaPredicted RBP18.08■□□□□ 0.48
SPSB4-204ENST00000508828 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
SPSB4-204ENST00000508828 STK26Q9P289 416 aa18.08■□□□□ 0.48
SPSB4-204ENST00000508828 EID1Q9Y6B2 187 aa18.08■□□□□ 0.48
SPSB4-204ENST00000508828 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
SPSB4-204ENST00000508828 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
SPSB4-204ENST00000508828 PANK3Q9H999 370 aa18.07■□□□□ 0.48
SPSB4-204ENST00000508828 RALBP1Q15311 655 aa18.06■□□□□ 0.48
SPSB4-204ENST00000508828 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
SPSB4-204ENST00000508828 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
SPSB4-204ENST00000508828 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
SPSB4-204ENST00000508828 BCANQ96GW7 911 aa18.05■□□□□ 0.48
SPSB4-204ENST00000508828 POGKQ9P215 609 aa18.05■□□□□ 0.48
SPSB4-204ENST00000508828 TXNDC2Q86VQ3 553 aa18.04■□□□□ 0.48
SPSB4-204ENST00000508828 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
SPSB4-204ENST00000508828 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
SPSB4-204ENST00000508828 FBXO41Q8TF61 875 aa18.03■□□□□ 0.48
SPSB4-204ENST00000508828 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
SPSB4-204ENST00000508828 TECPR2O15040 1411 aa18.03■□□□□ 0.48
SPSB4-204ENST00000508828 ADAMTS13Q76LX8 1427 aa18.03■□□□□ 0.48
SPSB4-204ENST00000508828 CPS1P31327 1500 aa18.03■□□□□ 0.48
SPSB4-204ENST00000508828 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.47
SPSB4-204ENST00000508828 PARD3Q8TEW0 1356 aa18.02■□□□□ 0.47
SPSB4-204ENST00000508828 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
SPSB4-204ENST00000508828 LTKP29376 864 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms