RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 KANK1Q14678 1352 aa18.02■□□□□ 0.47
NEDD9-212ENST00000508800 FOXD1Q16676 465 aa18.01■□□□□ 0.47
NEDD9-212ENST00000508800 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
NEDD9-212ENST00000508800 IDI1Q13907 227 aa17.98■□□□□ 0.47
NEDD9-212ENST00000508800 MYOM3Q5VTT5 1437 aa17.98■□□□□ 0.47
NEDD9-212ENST00000508800 KIF15Q9NS87 1388 aa17.97■□□□□ 0.47
NEDD9-212ENST00000508800 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
NEDD9-212ENST00000508800 BCANQ96GW7 911 aa17.96■□□□□ 0.47
NEDD9-212ENST00000508800 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
NEDD9-212ENST00000508800 DIP2AQ14689 1571 aa17.95■□□□□ 0.46
NEDD9-212ENST00000508800 SLC52A1Q9NWF4 448 aa17.94■□□□□ 0.46
NEDD9-212ENST00000508800 NOS1P29475 1434 aa17.94■□□□□ 0.46
NEDD9-212ENST00000508800 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.94■□□□□ 0.46
NEDD9-212ENST00000508800 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
NEDD9-212ENST00000508800 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
NEDD9-212ENST00000508800 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
NEDD9-212ENST00000508800 AFF2P51816 1311 aa17.93■□□□□ 0.46
NEDD9-212ENST00000508800 RGS12O14924 1447 aa17.92■□□□□ 0.46
NEDD9-212ENST00000508800 ATF3P18847 181 aa17.92■□□□□ 0.46
NEDD9-212ENST00000508800 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
NEDD9-212ENST00000508800 ZFYVE9O95405 1425 aa17.91■□□□□ 0.46
NEDD9-212ENST00000508800 RBM6P78332 1123 aaKnown RBP17.91■□□□□ 0.46
NEDD9-212ENST00000508800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.46
NEDD9-212ENST00000508800 PIK3R4Q99570 1358 aa17.9■□□□□ 0.46
NEDD9-212ENST00000508800 EP400Q96L91 3159 aa17.89■□□□□ 0.45
NEDD9-212ENST00000508800 TBX22Q9Y458 520 aa17.89■□□□□ 0.45
NEDD9-212ENST00000508800 ATAD2Q6PL18 1390 aa17.89■□□□□ 0.45
NEDD9-212ENST00000508800 DCCP43146 1447 aa17.89■□□□□ 0.45
NEDD9-212ENST00000508800 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
NEDD9-212ENST00000508800 NUTM2BA6NNL0 878 aaPredicted RBP17.88■□□□□ 0.45
NEDD9-212ENST00000508800 NUTM2EB1AL46 878 aaPredicted RBP17.88■□□□□ 0.45
NEDD9-212ENST00000508800 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
NEDD9-212ENST00000508800 NUTM2AQ8IVF1 878 aaPredicted RBP17.88■□□□□ 0.45
NEDD9-212ENST00000508800 ZRANB1Q9UGI0 708 aa17.88■□□□□ 0.45
NEDD9-212ENST00000508800 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
NEDD9-212ENST00000508800 MYO5BQ9ULV0 1848 aa17.87■□□□□ 0.45
NEDD9-212ENST00000508800 NGLY1Q96IV0 654 aa17.87■□□□□ 0.45
NEDD9-212ENST00000508800 NUTM2DQ5VT03 806 aaPredicted RBP17.86■□□□□ 0.45
NEDD9-212ENST00000508800 NHSL1Q5SYE7 1610 aa17.85■□□□□ 0.45
NEDD9-212ENST00000508800 BRINP3Q76B58 766 aa17.85■□□□□ 0.45
NEDD9-212ENST00000508800 QTRT2Q9H974 415 aaKnown RBP17.85■□□□□ 0.45
NEDD9-212ENST00000508800 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
NEDD9-212ENST00000508800 GCC2Q8IWJ2 1684 aa17.84■□□□□ 0.45
NEDD9-212ENST00000508800 ASXL1Q8IXJ9 1541 aa17.84■□□□□ 0.45
NEDD9-212ENST00000508800 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
NEDD9-212ENST00000508800 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
NEDD9-212ENST00000508800 LRRC59Q96AG4 307 aaKnown RBP17.83■□□□□ 0.44
NEDD9-212ENST00000508800 TMEM131LA2VDJ0 1609 aa17.82■□□□□ 0.44
NEDD9-212ENST00000508800 ABCC5O15440 1437 aa17.81■□□□□ 0.44
NEDD9-212ENST00000508800 C8orf37Q96NL8 207 aa17.81■□□□□ 0.44
NEDD9-212ENST00000508800 TRPM2O94759 1503 aa17.81■□□□□ 0.44
NEDD9-212ENST00000508800 ADAMTS13Q76LX8 1427 aa17.8■□□□□ 0.44
NEDD9-212ENST00000508800 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
NEDD9-212ENST00000508800 CCDC125Q86Z20 511 aa17.79■□□□□ 0.44
NEDD9-212ENST00000508800 DAPK1P53355 1430 aa17.78■□□□□ 0.44
NEDD9-212ENST00000508800 PNPLA6Q8IY17 1366 aa17.77■□□□□ 0.43
NEDD9-212ENST00000508800 PTPN23Q9H3S7 1636 aa17.76■□□□□ 0.43
NEDD9-212ENST00000508800 SETBP1Q9Y6X0 1596 aa17.76■□□□□ 0.43
NEDD9-212ENST00000508800 MST1RQ04912 1400 aa17.75■□□□□ 0.43
NEDD9-212ENST00000508800 VPS8Q8N3P4 1428 aa17.74■□□□□ 0.43
NEDD9-212ENST00000508800 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
NEDD9-212ENST00000508800 TRPC5Q9UL62 973 aaPredicted RBP17.72■□□□□ 0.43
NEDD9-212ENST00000508800 AMOTL2Q9Y2J4 779 aa17.72■□□□□ 0.43
NEDD9-212ENST00000508800 LAMC1P11047 1609 aa17.7■□□□□ 0.42
NEDD9-212ENST00000508800 PTCH1Q13635 1447 aa17.7■□□□□ 0.42
NEDD9-212ENST00000508800 UNC13BO14795 1591 aa17.7■□□□□ 0.42
NEDD9-212ENST00000508800 USP21Q9UK80 565 aa17.69■□□□□ 0.42
NEDD9-212ENST00000508800 KANK4Q5T7N3 995 aaPredicted RBP17.68■□□□□ 0.42
NEDD9-212ENST00000508800 PTPRUQ92729 1446 aa17.68■□□□□ 0.42
NEDD9-212ENST00000508800 LRP5O75197 1615 aa17.68■□□□□ 0.42
NEDD9-212ENST00000508800 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
NEDD9-212ENST00000508800 ATRNO75882 1429 aa17.67■□□□□ 0.42
NEDD9-212ENST00000508800 ADGRL3Q9HAR2 1447 aa17.67■□□□□ 0.42
NEDD9-212ENST00000508800 ADAMTS2O95450 1211 aa17.67■□□□□ 0.42
NEDD9-212ENST00000508800 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
NEDD9-212ENST00000508800 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
NEDD9-212ENST00000508800 CHIC2Q9UKJ5 165 aa17.64■□□□□ 0.41
NEDD9-212ENST00000508800 ANKRD50Q9ULJ7 1429 aa17.64■□□□□ 0.41
NEDD9-212ENST00000508800 COL22A1Q8NFW1 1626 aaPredicted RBP17.63■□□□□ 0.41
NEDD9-212ENST00000508800 IQGAP3Q86VI3 1631 aa17.62■□□□□ 0.41
NEDD9-212ENST00000508800 NALCNQ8IZF0 1738 aa17.62■□□□□ 0.41
NEDD9-212ENST00000508800 BLMP54132 1417 aaPredicted RBP17.62■□□□□ 0.41
NEDD9-212ENST00000508800 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
NEDD9-212ENST00000508800 E9PCH4 1651 aa17.61■□□□□ 0.41
NEDD9-212ENST00000508800 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
NEDD9-212ENST00000508800 MARF1Q9Y4F3 1742 aaKnown RBP17.59■□□□□ 0.41
NEDD9-212ENST00000508800 C1orf167Q5SNV9 1468 aa17.59■□□□□ 0.41
NEDD9-212ENST00000508800 DDX17Q92841 729 aaKnown RBP17.59■□□□□ 0.41
NEDD9-212ENST00000508800 SPHKAPQ2M3C7 1700 aa17.58■□□□□ 0.41
NEDD9-212ENST00000508800 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.4
NEDD9-212ENST00000508800 MYOM2P54296 1465 aa17.55■□□□□ 0.4
NEDD9-212ENST00000508800 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
NEDD9-212ENST00000508800 SF3B2Q13435 895 aaKnown RBP17.54■□□□□ 0.4
NEDD9-212ENST00000508800 GJD4Q96KN9 370 aaPredicted RBP17.53■□□□□ 0.4
NEDD9-212ENST00000508800 METP08581 1390 aa17.53■□□□□ 0.4
NEDD9-212ENST00000508800 APLP2Q06481 763 aa17.51■□□□□ 0.39
NEDD9-212ENST00000508800 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
NEDD9-212ENST00000508800 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
NEDD9-212ENST00000508800 ORAI2Q96SN7 254 aa17.47■□□□□ 0.39
NEDD9-212ENST00000508800 RALGAPBQ86X10 1494 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms