RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 IFT172Q9UG01 1749 aa15.84■□□□□ 0.13
PRPF40B-203ENST00000508736 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
PRPF40B-203ENST00000508736 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
PRPF40B-203ENST00000508736 NRXN1Q9ULB1 1477 aa15.83■□□□□ 0.12
PRPF40B-203ENST00000508736 IQGAP1P46940 1657 aa15.82■□□□□ 0.12
PRPF40B-203ENST00000508736 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
PRPF40B-203ENST00000508736 TESK2Q96S53 571 aa15.8■□□□□ 0.12
PRPF40B-203ENST00000508736 MROH2AA6NES4 1674 aa15.8■□□□□ 0.12
PRPF40B-203ENST00000508736 SCAF11Q99590 1463 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-203ENST00000508736 MRS2Q9HD23 443 aa15.79■□□□□ 0.12
PRPF40B-203ENST00000508736 RPGRIP1LQ68CZ1 1315 aa15.79■□□□□ 0.12
PRPF40B-203ENST00000508736 KTN1Q86UP2 1357 aaKnown RBP15.77■□□□□ 0.12
PRPF40B-203ENST00000508736 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.11
PRPF40B-203ENST00000508736 SYNMO15061 1565 aa15.77■□□□□ 0.11
PRPF40B-203ENST00000508736 PPLO60437 1756 aa15.75■□□□□ 0.11
PRPF40B-203ENST00000508736 EIF3AQ14152 1382 aaKnown RBP15.75■□□□□ 0.11
PRPF40B-203ENST00000508736 SETBP1Q9Y6X0 1596 aa15.75■□□□□ 0.11
PRPF40B-203ENST00000508736 TMF1P82094 1093 aa15.75■□□□□ 0.11
PRPF40B-203ENST00000508736 BCANQ96GW7 911 aa15.75■□□□□ 0.11
PRPF40B-203ENST00000508736 CFAP65Q6ZU64 1925 aaKnown RBP15.75■□□□□ 0.11
PRPF40B-203ENST00000508736 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
PRPF40B-203ENST00000508736 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
PRPF40B-203ENST00000508736 CLTCQ00610 1675 aaKnown RBP15.74■□□□□ 0.11
PRPF40B-203ENST00000508736 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-203ENST00000508736 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
PRPF40B-203ENST00000508736 DISP3Q9P2K9 1392 aa15.73■□□□□ 0.11
PRPF40B-203ENST00000508736 ZBED9Q6R2W3 1325 aa15.73■□□□□ 0.11
PRPF40B-203ENST00000508736 POLR3GLQ9BT43 218 aa15.73■□□□□ 0.11
PRPF40B-203ENST00000508736 ADGRF5Q8IZF2 1346 aa15.72■□□□□ 0.11
PRPF40B-203ENST00000508736 PIK3C2GO75747 1445 aa15.72■□□□□ 0.11
PRPF40B-203ENST00000508736 FBXO31Q5XUX0 539 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-203ENST00000508736 PREX1Q8TCU6 1659 aa15.72■□□□□ 0.11
PRPF40B-203ENST00000508736 CCDC184Q52MB2 194 aa15.71■□□□□ 0.11
PRPF40B-203ENST00000508736 FAM9BQ8IZU0 186 aa15.71■□□□□ 0.11
PRPF40B-203ENST00000508736 ADAMTSL3P82987 1691 aa15.71■□□□□ 0.11
PRPF40B-203ENST00000508736 FER1L4A9Z1Z3 1794 aa15.71■□□□□ 0.11
PRPF40B-203ENST00000508736 KDM4FA0A1W2PPD8 638 aa15.71■□□□□ 0.11
PRPF40B-203ENST00000508736 CDCA8Q53HL2 280 aa15.7■□□□□ 0.1
PRPF40B-203ENST00000508736 ZFYVE9O95405 1425 aa15.7■□□□□ 0.1
PRPF40B-203ENST00000508736 MYO3AQ8NEV4 1616 aa15.69■□□□□ 0.1
PRPF40B-203ENST00000508736 CFAP70Q5T0N1 1121 aa15.69■□□□□ 0.1
PRPF40B-203ENST00000508736 TSHZ2Q9NRE2 1034 aa15.69■□□□□ 0.1
PRPF40B-203ENST00000508736 NEXMIFQ5QGS0 1516 aa15.69■□□□□ 0.1
PRPF40B-203ENST00000508736 SBNO2Q9Y2G9 1366 aa15.68■□□□□ 0.1
PRPF40B-203ENST00000508736 RALBP1Q15311 655 aa15.68■□□□□ 0.1
PRPF40B-203ENST00000508736 ERICH6BQ5W0A0 696 aa15.68■□□□□ 0.1
PRPF40B-203ENST00000508736 RIMS1Q86UR5 1692 aaKnown RBP15.68■□□□□ 0.1
PRPF40B-203ENST00000508736 C14orf93Q9H972 538 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-203ENST00000508736 PER1O15534 1290 aaPredicted RBP15.67■□□□□ 0.1
PRPF40B-203ENST00000508736 CHGAP10645 457 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-203ENST00000508736 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
PRPF40B-203ENST00000508736 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-203ENST00000508736 IDI1Q13907 227 aa15.66■□□□□ 0.1
PRPF40B-203ENST00000508736 ADGRB1O14514 1584 aa15.66■□□□□ 0.1
PRPF40B-203ENST00000508736 TMEM131LA2VDJ0 1609 aa15.65■□□□□ 0.1
PRPF40B-203ENST00000508736 SPATA31D1Q6ZQQ2 1576 aa15.64■□□□□ 0.09
PRPF40B-203ENST00000508736 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
PRPF40B-203ENST00000508736 PTPRMP28827 1452 aa15.64■□□□□ 0.09
PRPF40B-203ENST00000508736 C3P01024 1663 aa15.63■□□□□ 0.09
PRPF40B-203ENST00000508736 MYBBP1AQ9BQG0 1328 aaKnown RBP15.63■□□□□ 0.09
PRPF40B-203ENST00000508736 BRD4O60885 1362 aaPredicted RBP15.62■□□□□ 0.09
PRPF40B-203ENST00000508736 KDM5AP29375 1690 aaKnown RBP15.61■□□□□ 0.09
PRPF40B-203ENST00000508736 MYT1Q01538 1121 aa15.61■□□□□ 0.09
PRPF40B-203ENST00000508736 TNRQ92752 1358 aa15.6■□□□□ 0.09
PRPF40B-203ENST00000508736 PANK3Q9H999 370 aa15.6■□□□□ 0.09
PRPF40B-203ENST00000508736 TMC1Q8TDI8 760 aa15.59■□□□□ 0.09
PRPF40B-203ENST00000508736 SMG6Q86US8 1419 aaKnown RBP15.59■□□□□ 0.09
PRPF40B-203ENST00000508736 MYOM1P52179 1685 aa15.59■□□□□ 0.09
PRPF40B-203ENST00000508736 CENPJQ9HC77 1338 aaPredicted RBP15.58■□□□□ 0.08
PRPF40B-203ENST00000508736 NLRP13Q86W25 1043 aa15.57■□□□□ 0.08
PRPF40B-203ENST00000508736 PNISRQ8TF01 805 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-203ENST00000508736 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
PRPF40B-203ENST00000508736 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
PRPF40B-203ENST00000508736 NPC1L1Q9UHC9 1359 aa15.56■□□□□ 0.08
PRPF40B-203ENST00000508736 CNGB1Q14028 1251 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-203ENST00000508736 LRPPRCP42704 1394 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-203ENST00000508736 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
PRPF40B-203ENST00000508736 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
PRPF40B-203ENST00000508736 QRICH2Q9H0J4 1663 aa15.54■□□□□ 0.08
PRPF40B-203ENST00000508736 A2ML1A8K2U0 1454 aa15.54■□□□□ 0.08
PRPF40B-203ENST00000508736 ASXL1Q8IXJ9 1541 aa15.53■□□□□ 0.08
PRPF40B-203ENST00000508736 ARHGEF28Q8N1W1 1705 aaKnown RBP15.53■□□□□ 0.08
PRPF40B-203ENST00000508736 IRX6P78412 446 aaPredicted RBP15.52■□□□□ 0.08
PRPF40B-203ENST00000508736 KNSTRNQ9Y448 316 aa15.52■□□□□ 0.08
PRPF40B-203ENST00000508736 INSRP06213 1382 aa15.52■□□□□ 0.08
PRPF40B-203ENST00000508736 TRAK1Q9UPV9 953 aa15.52■□□□□ 0.07
PRPF40B-203ENST00000508736 NUDCQ9Y266 331 aa15.52■□□□□ 0.07
PRPF40B-203ENST00000508736 SETD1BQ9UPS6 1966 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-203ENST00000508736 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-203ENST00000508736 TMEM132EQ6IEE7 984 aa15.5■□□□□ 0.07
PRPF40B-203ENST00000508736 NLRP1Q9C000 1473 aa15.5■□□□□ 0.07
PRPF40B-203ENST00000508736 ALKQ9UM73 1620 aa15.48■□□□□ 0.07
PRPF40B-203ENST00000508736 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
PRPF40B-203ENST00000508736 NUTM2DQ5VT03 806 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-203ENST00000508736 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-203ENST00000508736 RIMS2Q9UQ26 1411 aa15.47■□□□□ 0.07
PRPF40B-203ENST00000508736 YTHDC2Q9H6S0 1430 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-203ENST00000508736 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.46■□□□□ 0.06
PRPF40B-203ENST00000508736 EVC2Q86UK5 1308 aa15.45■□□□□ 0.06
PRPF40B-203ENST00000508736 TULP4Q9NRJ4 1543 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms